RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 GDF9O60383 454 aa8.16□□□□□ -1.1
HDAC3-206ENST00000471968 LGR5O75473 907 aa8.16□□□□□ -1.1
HDAC3-206ENST00000471968 DCNP07585 359 aaKnown RBP8.16□□□□□ -1.1
HDAC3-206ENST00000471968 SPINK2P20155 84 aa8.16□□□□□ -1.1
HDAC3-206ENST00000471968 PURAQ00577 322 aaKnown RBP8.16□□□□□ -1.1
HDAC3-206ENST00000471968 C19orf57Q0VDD7 668 aa8.16□□□□□ -1.1
HDAC3-206ENST00000471968 FIBCD1Q8N539 461 aa8.16□□□□□ -1.1
HDAC3-206ENST00000471968 SH3RF3Q8TEJ3 882 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-206ENST00000471968 ZNF384Q8TF68 577 aa8.16□□□□□ -1.1
HDAC3-206ENST00000471968 LPIN2Q92539 896 aa8.16□□□□□ -1.1
HDAC3-206ENST00000471968 NEK1Q96PY6 1258 aa8.16□□□□□ -1.1
HDAC3-206ENST00000471968 POLR3EQ9NVU0 708 aa8.16□□□□□ -1.1
HDAC3-206ENST00000471968 RNF216Q9NWF9 866 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-206ENST00000471968 LIMD1Q9UGP4 676 aa8.16□□□□□ -1.1
HDAC3-206ENST00000471968 SAP30BPQ9UHR5 308 aaKnown RBP8.16□□□□□ -1.1
HDAC3-206ENST00000471968 CDH22Q9UJ99 828 aa8.16□□□□□ -1.1
HDAC3-206ENST00000471968 ABCA12Q86UK0 2595 aa8.16□□□□□ -1.1
HDAC3-206ENST00000471968 A0A1W2PRG0 241 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 POTEMA6NI47 508 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 PER2O15055 1255 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 PARNO95453 639 aaKnown RBP8.15□□□□□ -1.1
HDAC3-206ENST00000471968 HLA-DOAP06340 250 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 DNAJB1P25685 340 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 COPB2P35606 906 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 PHKA1P46020 1223 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 CHMP4BP1P59074 171 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 PTGISQ16647 500 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 ABCB5Q2M3G0 1257 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 KIAA1755Q5JYT7 1200 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 SPTY2D1Q68D10 685 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-206ENST00000471968 NFRKBQ6P4R8 1299 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 POTEGQ6S5H5 508 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 TMEFF1Q8IYR6 380 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 SPICE1Q8N0Z3 855 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 FAM133AQ8N9E0 248 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 GLIS3Q8NEA6 775 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 VN1R2Q8NFZ6 395 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 KLHDC4Q8TBB5 520 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 TGFBRAP1Q8WUH2 860 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 ATRIPQ8WXE1 791 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 FGD4Q96M96 766 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 MTG1Q9BT17 334 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-206ENST00000471968 STK31Q9BXU1 1019 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 ADAM33Q9BZ11 813 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 S1PR5Q9H228 398 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 TLE6Q9H808 572 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 GPHNQ9NQX3 736 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-206ENST00000471968 TRIM35Q9UPQ4 493 aa8.15□□□□□ -1.1
HDAC3-206ENST00000471968 MICAL3Q7RTP6 2002 aa8.15□□□□□ -1.11
HDAC3-206ENST00000471968 FLT1P17948 1338 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 MCM3APO60318 1980 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 ARHGAP6O43182 974 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 LINC00271P0C7V0 271 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 CKBP12277 381 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 SLC4A3P48751 1232 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 FKBP5Q13451 457 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-206ENST00000471968 CCDC6Q16204 474 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 CERKLQ49MI3 558 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-206ENST00000471968 ATF7IPQ6VMQ6 1270 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 ERICH6Q7L0X2 663 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 MAML2Q8IZL2 1156 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-206ENST00000471968 TOP1MTQ969P6 601 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 LSM14BQ9BX40 385 aaKnown RBP8.14□□□□□ -1.11
HDAC3-206ENST00000471968 CHMP4AQ9BY43 222 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 IFIH1Q9BYX4 1025 aaKnown RBP8.14□□□□□ -1.11
HDAC3-206ENST00000471968 EPC1Q9H2F5 836 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 CABP5Q9NP86 173 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 GPR108Q9NPR9 543 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 PDGFCQ9NRA1 345 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 ZNF214Q9UL59 606 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-206ENST00000471968 PLAGL2Q9UPG8 496 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 RWDD3Q9Y3V2 267 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 DOPEY1Q5JWR5 2465 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 CELSR3Q9NYQ7 3312 aa8.14□□□□□ -1.11
HDAC3-206ENST00000471968 TRIP12Q14669 1992 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-206ENST00000471968 GRM8O00222 908 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 MAP3K13O43283 966 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 PRB1P04280 392 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 LDHCP07864 332 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 PLA2G2AP14555 144 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 TECP42680 631 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 FOXC1Q12948 553 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 SEPT2Q15019 361 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 TATDN1Q6P1N9 297 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 TDRD5Q8NAT2 981 aaKnown RBP8.13□□□□□ -1.11
HDAC3-206ENST00000471968 DBF4BQ8NFT6 615 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 ATP8B4Q8TF62 1192 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 DHX38Q92620 1227 aaKnown RBP8.13□□□□□ -1.11
HDAC3-206ENST00000471968 GATA6Q92908 595 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 IL17RAQ96F46 866 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 BORCS6Q96GS4 357 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 POMKQ9H5K3 350 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 FBXO28Q9NVF7 368 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 Q9Y3F1 56 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 PCDHGA2Q9Y5H1 932 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 CACNA1IQ9P0X4 2223 aa8.13□□□□□ -1.11
HDAC3-206ENST00000471968 ADAMTS20P59510 1910 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 VWA5AO00534 786 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 WDR46O15213 610 aaKnown RBP8.12□□□□□ -1.11
HDAC3-206ENST00000471968 GUCY1A2P33402 732 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms