RNA–Protein interactions for RNA: ENST00000459809.5

PHF1-206, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-206ENST00000459809 TMEM63BQ5T3F8 832 aa15.19■□□□□ 0.02
PHF1-206ENST00000459809 ARHGEF16Q5VV41 709 aa15.19■□□□□ 0.02
PHF1-206ENST00000459809 FAM109BQ6ICB4 259 aaPredicted RBP15.19■□□□□ 0.02
PHF1-206ENST00000459809 MFSD5Q6N075 450 aa15.19■□□□□ 0.02
PHF1-206ENST00000459809 CHST3Q7LGC8 479 aa15.19■□□□□ 0.02
PHF1-206ENST00000459809 TMEM87BQ96K49 555 aa15.19■□□□□ 0.02
PHF1-206ENST00000459809 LZTS2Q9BRK4 669 aa15.19■□□□□ 0.02
PHF1-206ENST00000459809 DNAH12Q6ZR08 3092 aa15.18■□□□□ 0.02
PHF1-206ENST00000459809 A6NJR5 290 aa15.18■□□□□ 0.02
PHF1-206ENST00000459809 SLC27A2O14975 620 aa15.18■□□□□ 0.02
PHF1-206ENST00000459809 CFBP00751 764 aa15.18■□□□□ 0.02
PHF1-206ENST00000459809 GNAQP50148 359 aa15.18■□□□□ 0.02
PHF1-206ENST00000459809 RNF20Q5VTR2 975 aa15.18■□□□□ 0.02
PHF1-206ENST00000459809 TMEM199Q8N511 208 aa15.18■□□□□ 0.02
PHF1-206ENST00000459809 DEFB123Q8N688 67 aa15.18■□□□□ 0.02
PHF1-206ENST00000459809 OR6J1Q8NGC5 347 aa15.18■□□□□ 0.02
PHF1-206ENST00000459809 SENP2Q9HC62 589 aa15.18■□□□□ 0.02
PHF1-206ENST00000459809 ANO2Q9NQ90 1003 aa15.18■□□□□ 0.02
PHF1-206ENST00000459809 GRIN2DO15399 1336 aa15.17■□□□□ 0.02
PHF1-206ENST00000459809 LAMA4Q16363 1823 aa15.17■□□□□ 0.02
PHF1-206ENST00000459809 PRC1O43663 620 aa15.17■□□□□ 0.02
PHF1-206ENST00000459809 PPP1R11O60927 126 aaPredicted RBP15.17■□□□□ 0.02
PHF1-206ENST00000459809 DDAH1O94760 285 aa15.17■□□□□ 0.02
PHF1-206ENST00000459809 NR3C2P08235 984 aa15.17■□□□□ 0.02
PHF1-206ENST00000459809 SUPT20HL2P0C7V6 817 aa15.17■□□□□ 0.02
PHF1-206ENST00000459809 CALM1P0DP23 149 aa15.17■□□□□ 0.02
PHF1-206ENST00000459809 CALM2P0DP24 149 aa15.17■□□□□ 0.02
PHF1-206ENST00000459809 CALM3P0DP25 149 aa15.17■□□□□ 0.02
PHF1-206ENST00000459809 LIFRP42702 1097 aa15.17■□□□□ 0.02
PHF1-206ENST00000459809 PURAQ00577 322 aaKnown RBP15.17■□□□□ 0.02
PHF1-206ENST00000459809 CREB3L3Q68CJ9 461 aa15.17■□□□□ 0.02
PHF1-206ENST00000459809 CCDC62Q6P9F0 684 aa15.17■□□□□ 0.02
PHF1-206ENST00000459809 CTCFLQ8NI51 663 aaPredicted RBP15.17■□□□□ 0.02
PHF1-206ENST00000459809 PIGSQ96S52 555 aa15.17■□□□□ 0.02
PHF1-206ENST00000459809 MTG1Q9BT17 334 aaPredicted RBP15.17■□□□□ 0.02
PHF1-206ENST00000459809 LY9Q9HBG7 655 aa15.17■□□□□ 0.02
PHF1-206ENST00000459809 COL20A1Q9P218 1284 aa15.17■□□□□ 0.02
PHF1-206ENST00000459809 CCDC69A6NI79 296 aa15.16■□□□□ 0.02
PHF1-206ENST00000459809 GCOM1H8Y6P7 765 aaPredicted RBP15.16■□□□□ 0.02
PHF1-206ENST00000459809 OPLAHO14841 1288 aa15.16■□□□□ 0.02
PHF1-206ENST00000459809 CYTH3O43739 400 aa15.16■□□□□ 0.02
PHF1-206ENST00000459809 POLR2MP0CAP2 368 aa15.16■□□□□ 0.02
PHF1-206ENST00000459809 SMAD3P84022 425 aaKnown RBP15.16■□□□□ 0.02
PHF1-206ENST00000459809 PPIGQ13427 754 aaKnown RBP eCLIP15.16■□□□□ 0.027e-8■■■■■ 29.8
PHF1-206ENST00000459809 C9orf50Q5SZB4 431 aa15.16■□□□□ 0.02
PHF1-206ENST00000459809 KCNV1Q6PIU1 500 aa15.16■□□□□ 0.02
PHF1-206ENST00000459809 NFXL1Q6ZNB6 911 aa15.16■□□□□ 0.02
PHF1-206ENST00000459809 HOMER1Q86YM7 354 aa15.16■□□□□ 0.02
PHF1-206ENST00000459809 ZNF654Q8IZM8 581 aa15.16■□□□□ 0.02
PHF1-206ENST00000459809 SPZ1Q9BXG8 430 aa15.16■□□□□ 0.02
PHF1-206ENST00000459809 PXMP2Q9NR77 195 aa15.16■□□□□ 0.02
PHF1-206ENST00000459809 GH1P01241 217 aa15.15■□□□□ 0.02
PHF1-206ENST00000459809 MYL3P08590 195 aa15.15■□□□□ 0.02
PHF1-206ENST00000459809 EIF2AK2P19525 551 aaKnown RBP15.15■□□□□ 0.02
PHF1-206ENST00000459809 PTGS1P23219 599 aa15.15■□□□□ 0.02
PHF1-206ENST00000459809 EPHB4P54760 987 aa15.15■□□□□ 0.02
PHF1-206ENST00000459809 PTPN11Q06124 597 aaPredicted RBP15.15■□□□□ 0.02
PHF1-206ENST00000459809 SLC35G1Q2M3R5 365 aa15.15■□□□□ 0.02
PHF1-206ENST00000459809 TSGA10IPQ3SY00 556 aa15.15■□□□□ 0.02
PHF1-206ENST00000459809 SEPT14Q6ZU15 432 aa15.15■□□□□ 0.02
PHF1-206ENST00000459809 VSIG10LQ86VR7 867 aa15.15■□□□□ 0.02
PHF1-206ENST00000459809 RRP36Q96EU6 259 aaKnown RBP15.15■□□□□ 0.02
PHF1-206ENST00000459809 CCDC136Q96JN2 1154 aa15.15■□□□□ 0.02
PHF1-206ENST00000459809 ALDH8A1Q9H2A2 487 aaPredicted RBP15.15■□□□□ 0.02
PHF1-206ENST00000459809 MTMR10Q9NXD2 777 aa15.15■□□□□ 0.02
PHF1-206ENST00000459809 SH2B2O14492 632 aaPredicted RBP15.14■□□□□ 0.01
PHF1-206ENST00000459809 CDC45O75419 566 aa15.14■□□□□ 0.01
PHF1-206ENST00000459809 TGFB3P10600 412 aa15.14■□□□□ 0.01
PHF1-206ENST00000459809 PSMC6P62333 389 aa15.14■□□□□ 0.01
PHF1-206ENST00000459809 LAMC2Q13753 1193 aa15.14■□□□□ 0.01
PHF1-206ENST00000459809 LY6KQ17RY6 165 aa15.14■□□□□ 0.01
PHF1-206ENST00000459809 NFRKBQ6P4R8 1299 aa15.14■□□□□ 0.01
PHF1-206ENST00000459809 EMID1Q96A84 441 aaPredicted RBP15.14■□□□□ 0.01
PHF1-206ENST00000459809 RNPC3Q96LT9 517 aaKnown RBP15.14■□□□□ 0.01
PHF1-206ENST00000459809 PDCD2LQ9BRP1 358 aa15.14■□□□□ 0.01
PHF1-206ENST00000459809 TRPV6Q9H1D0 765 aa15.14■□□□□ 0.01
PHF1-206ENST00000459809 HIPK3Q9H422 1215 aa15.14■□□□□ 0.01
PHF1-206ENST00000459809 DDX41Q9UJV9 622 aaKnown RBP15.14■□□□□ 0.01
PHF1-206ENST00000459809 SLC12A7Q9Y666 1083 aa15.14■□□□□ 0.01
PHF1-206ENST00000459809 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.13■□□□□ 0.01
PHF1-206ENST00000459809 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.13■□□□□ 0.01
PHF1-206ENST00000459809 B4GALT4O60513 344 aa15.13■□□□□ 0.01
PHF1-206ENST00000459809 ARIH2O95376 493 aa15.13■□□□□ 0.01
PHF1-206ENST00000459809 CSF2RAP15509 400 aa15.13■□□□□ 0.01
PHF1-206ENST00000459809 CASTP20810 708 aaKnown RBP15.13■□□□□ 0.01
PHF1-206ENST00000459809 KRT32Q14532 448 aa15.13■□□□□ 0.01
PHF1-206ENST00000459809 SYNE3Q6ZMZ3 975 aa15.13■□□□□ 0.01
PHF1-206ENST00000459809 SGMS1Q86VZ5 419 aa15.13■□□□□ 0.01
PHF1-206ENST00000459809 FANCBQ8NB91 859 aa15.13■□□□□ 0.01
PHF1-206ENST00000459809 COPS5Q92905 334 aa15.13■□□□□ 0.01
PHF1-206ENST00000459809 NEK1Q96PY6 1258 aa15.13■□□□□ 0.01
PHF1-206ENST00000459809 SEC63Q9UGP8 760 aaKnown RBP15.13■□□□□ 0.01
PHF1-206ENST00000459809 MRVI1Q9Y6F6 885 aa15.13■□□□□ 0.01
PHF1-206ENST00000459809 STAM2O75886 525 aa15.12■□□□□ 0.01
PHF1-206ENST00000459809 HMGB1P09429 215 aaKnown RBP15.12■□□□□ 0.01
PHF1-206ENST00000459809 MYCLP12524 364 aaPredicted RBP15.12■□□□□ 0.01
PHF1-206ENST00000459809 CCND2P30279 289 aa15.12■□□□□ 0.01
PHF1-206ENST00000459809 HOXA13P31271 388 aaPredicted RBP15.12■□□□□ 0.01
PHF1-206ENST00000459809 CYP2C18P33260 490 aa15.12■□□□□ 0.01
PHF1-206ENST00000459809 ARHGAP1Q07960 439 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms