RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 CSF2RAP15509 400 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 CNGA1P29973 690 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 BTDP43251 543 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 GSTO1P78417 241 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 JAG1P78504 1218 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 VAC14Q08AM6 782 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 TWISTNBQ3B726 338 aaPredicted RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 ZNF792Q3KQV3 632 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 HERC4Q5GLZ8 1057 aaPredicted RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 TMED8Q6PL24 325 aaPredicted RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 MAMDC4Q6UXC1 1216 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 TAS1R3Q7RTX0 852 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 ZSCAN29Q8IWY8 852 aaPredicted RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 WWC1Q8IX03 1113 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 RPUSD2Q8IZ73 545 aaKnown RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 DEPDC4Q8N2C3 294 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 PGBD3Q8N328 593 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 PRSS33Q8NF86 280 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 NEK9Q8TD19 979 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 SUCLG2Q96I99 432 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 ZSCAN10Q96SZ4 725 aaPredicted RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 MOV10L1Q9BXT6 1211 aaKnown RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 EHD4Q9H223 541 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 DNAJC18Q9H819 358 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 STARD7Q9NQZ5 370 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 ENAMQ9NRM1 1142 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 KRTAP9-6A0A140TA67 174 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 A0A1B0GUL7 405 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 FAM229AH3BQW9 127 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 ELL2O00472 640 aaPredicted RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 PQBP1O60828 265 aaKnown RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 CABYRO75952 493 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 SLC25A27O95847 323 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 SLURP2P0DP57 97 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 CD33P20138 364 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 RFC2P35250 354 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 GSK3AP49840 483 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 GJA9P57773 515 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 TAP1Q03518 808 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 FKBP5Q13451 457 aaPredicted RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 TLR1Q15399 786 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 TATDN1Q6P1N9 297 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 PCSK9Q8NBP7 692 aaKnown RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 ZNF384Q8TF68 577 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 FERMT2Q96AC1 680 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 ACDQ96AP0 544 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 PSMG3-AS1Q96PY0 264 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 PAGR1Q9BTK6 254 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 NOC4LQ9BVI4 516 aaKnown RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 OXCT2Q9BYC2 517 aaPredicted RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 UPF3BQ9BZI7 483 aaKnown RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 SPATC1LQ9H0A9 340 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 UBE2ZQ9H832 354 aaPredicted RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 ADAMTS5Q9UNA0 930 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 CHMP3Q9Y3E7 222 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 SLC4A7Q9Y6M7 1214 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 A0A0G2JMZ2 1700 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 KRTAP4-8A0A0G2JLE6 195 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 PEX10O60683 326 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 VAMP4O75379 141 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 CDK11BP21127 795 aaKnown RBP2.61□□□□□ -1.99
NEDD1-204ENST00000457368 ZEB1P37275 1124 aaPredicted RBP2.61□□□□□ -1.99
NEDD1-204ENST00000457368 SRSF11Q05519 484 aaKnown RBP2.61□□□□□ -1.99
NEDD1-204ENST00000457368 ZP2Q05996 745 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 KCNA1Q09470 495 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 TCF15Q12870 199 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 GRB10Q13322 594 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 TMEM67Q5HYA8 995 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 ATG9AQ7Z3C6 839 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 DPP9Q86TI2 863 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 CERS3Q8IU89 383 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 BEND7Q8N7W2 519 aaPredicted RBP2.61□□□□□ -1.99
NEDD1-204ENST00000457368 RGS22Q8NE09 1264 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 GLT1D1Q96MS3 346 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 SPOCK3Q9BQ16 436 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 TINF2Q9BSI4 451 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 GDPD2Q9HCC8 539 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 CWC22Q9HCG8 908 aaKnown RBP2.61□□□□□ -1.99
NEDD1-204ENST00000457368 HOXC10Q9NYD6 342 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 PRR12Q9ULL5 1215 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 FAM50BQ9Y247 325 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 CACNA1FO60840 1977 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 SYNRGQ9UMZ2 1314 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 EPOPA6NHQ4 379 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 SHISA8B8ZZ34 492 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 KHNYNO15037 678 aaKnown RBP2.61□□□□□ -1.99
NEDD1-204ENST00000457368 CTAGE5O15320 804 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 BAIAP3O94812 1187 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 ATP2A2P16615 1042 aaKnown RBP2.61□□□□□ -1.99
NEDD1-204ENST00000457368 VCAM1P19320 739 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 ERCC3P19447 782 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 CTBSQ01459 385 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 COG2Q14746 738 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 EFHC2Q5JST6 749 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 DZIP1Q86YF9 867 aaKnown RBP2.61□□□□□ -1.99
NEDD1-204ENST00000457368 RIOX2Q8IUF8 465 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 ADHFE1Q8IWW8 467 aa2.61□□□□□ -1.99
NEDD1-204ENST00000457368 CCDC146Q8IYE0 955 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms