RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 CA3P07451 260 aa21.97■■□□□ 1.11
MSH6-206ENST00000455383 HSPD1P10809 573 aaKnown RBP21.97■■□□□ 1.11
MSH6-206ENST00000455383 PDE1AP54750 535 aa21.97■■□□□ 1.11
MSH6-206ENST00000455383 MPHOSPH6Q99547 160 aaKnown RBP21.97■■□□□ 1.11
MSH6-206ENST00000455383 MTCH2Q9Y6C9 303 aa21.97■■□□□ 1.11
MSH6-206ENST00000455383 XIRP2A4UGR9 3374 aa21.96■■□□□ 1.11
MSH6-206ENST00000455383 TANC1Q9C0D5 1861 aa21.96■■□□□ 1.11
MSH6-206ENST00000455383 ARIH2O95376 493 aa21.96■■□□□ 1.11
MSH6-206ENST00000455383 PCP11498 1178 aaKnown RBP21.96■■□□□ 1.11
MSH6-206ENST00000455383 FAM47CQ5HY64 1035 aa21.96■■□□□ 1.11
MSH6-206ENST00000455383 MAF1Q9H063 256 aa21.96■■□□□ 1.11
MSH6-206ENST00000455383 RFXAPO00287 272 aa21.95■■□□□ 1.1
MSH6-206ENST00000455383 TXNP10599 105 aaKnown RBP21.95■■□□□ 1.1
MSH6-206ENST00000455383 BFSP2Q13515 415 aa21.95■■□□□ 1.1
MSH6-206ENST00000455383 ANKRD45Q5TZF3 282 aa21.95■■□□□ 1.1
MSH6-206ENST00000455383 CCDC62Q6P9F0 684 aa21.95■■□□□ 1.1
MSH6-206ENST00000455383 ZNF589Q86UQ0 364 aaPredicted RBP21.95■■□□□ 1.1
MSH6-206ENST00000455383 RETREG2Q8NC44 543 aa21.95■■□□□ 1.1
MSH6-206ENST00000455383 IL27Q8NEV9 243 aa21.95■■□□□ 1.1
MSH6-206ENST00000455383 PPP1R13LQ8WUF5 828 aa21.95■■□□□ 1.1
MSH6-206ENST00000455383 EPOPA6NHQ4 379 aa21.94■■□□□ 1.1
MSH6-206ENST00000455383 ARHGEF15O94989 841 aa21.94■■□□□ 1.1
MSH6-206ENST00000455383 TFF2Q03403 129 aa21.94■■□□□ 1.1
MSH6-206ENST00000455383 TAP1Q03518 808 aa21.94■■□□□ 1.1
MSH6-206ENST00000455383 HERC6Q8IVU3 1022 aa21.94■■□□□ 1.1
MSH6-206ENST00000455383 MICALL1Q8N3F8 863 aa21.94■■□□□ 1.1
MSH6-206ENST00000455383 CTAGE1Q96RT6 745 aa21.94■■□□□ 1.1
MSH6-206ENST00000455383 TRANK1O15050 2925 aa21.94■■□□□ 1.1
MSH6-206ENST00000455383 B4DLN1 442 aa21.93■■□□□ 1.1
MSH6-206ENST00000455383 BAIAP3O94812 1187 aa21.93■■□□□ 1.1
MSH6-206ENST00000455383 MRPL12P52815 198 aaKnown RBP21.93■■□□□ 1.1
MSH6-206ENST00000455383 HAND2P61296 217 aa21.93■■□□□ 1.1
MSH6-206ENST00000455383 AAK1Q2M2I8 961 aa21.93■■□□□ 1.1
MSH6-206ENST00000455383 PRRC2BQ5JSZ5 2229 aaKnown RBP21.93■■□□□ 1.1
MSH6-206ENST00000455383 GPATCH4Q5T3I0 446 aaKnown RBP21.93■■□□□ 1.1
MSH6-206ENST00000455383 SESTD1Q86VW0 696 aa21.93■■□□□ 1.1
MSH6-206ENST00000455383 TBC1D10CQ8IV04 446 aa21.93■■□□□ 1.1
MSH6-206ENST00000455383 NECAB3Q96P71 396 aaPredicted RBP21.93■■□□□ 1.1
MSH6-206ENST00000455383 TET1Q8NFU7 2136 aa21.92■■□□□ 1.1
MSH6-206ENST00000455383 CCDC171Q6TFL3 1326 aa21.92■■□□□ 1.1
MSH6-206ENST00000455383 BDP1A6H8Y1 2624 aa21.92■■□□□ 1.1
MSH6-206ENST00000455383 GTPBP6O43824 516 aaPredicted RBP21.92■■□□□ 1.1
MSH6-206ENST00000455383 NMIQ13287 307 aaPredicted RBP21.92■■□□□ 1.1
MSH6-206ENST00000455383 GPNMBQ14956 572 aa21.92■■□□□ 1.1
MSH6-206ENST00000455383 MFSD6Q6ZSS7 791 aa21.92■■□□□ 1.1
MSH6-206ENST00000455383 DGKHQ86XP1 1220 aa21.92■■□□□ 1.1
MSH6-206ENST00000455383 CERS4Q9HA82 394 aa21.92■■□□□ 1.1
MSH6-206ENST00000455383 KCNQ1P51787 676 aa21.91■■□□□ 1.1
MSH6-206ENST00000455383 ARHGAP1Q07960 439 aa21.91■■□□□ 1.1
MSH6-206ENST00000455383 CAGE1Q8TC20 777 aa21.91■■□□□ 1.1
MSH6-206ENST00000455383 AFAP1L1Q8TED9 768 aa21.91■■□□□ 1.1
MSH6-206ENST00000455383 FTOQ9C0B1 505 aaKnown RBP eCLIP21.91■■□□□ 1.1
MSH6-206ENST00000455383 ZBTB47Q9UFB7 747 aaPredicted RBP21.91■■□□□ 1.1
MSH6-206ENST00000455383 RAPGEFL1Q9UHV5 662 aa21.91■■□□□ 1.1
MSH6-206ENST00000455383 TCF20Q9UGU0 1960 aaKnown RBP21.9■■□□□ 1.1
MSH6-206ENST00000455383 KIF28PB7ZC32 967 aa21.9■■□□□ 1.1
MSH6-206ENST00000455383 MMP3P08254 477 aa21.9■■□□□ 1.1
MSH6-206ENST00000455383 GOLGA8HP0CJ92 632 aa21.9■■□□□ 1.1
MSH6-206ENST00000455383 NT5C2P49902 561 aa21.9■■□□□ 1.1
MSH6-206ENST00000455383 RBL2Q08999 1139 aa21.9■■□□□ 1.1
MSH6-206ENST00000455383 HDAC1Q13547 482 aaPredicted RBP21.9■■□□□ 1.1
MSH6-206ENST00000455383 PTGISQ16647 500 aa21.9■■□□□ 1.1
MSH6-206ENST00000455383 USH1GQ495M9 461 aa21.9■■□□□ 1.1
MSH6-206ENST00000455383 SYTL5Q8TDW5 730 aaPredicted RBP21.9■■□□□ 1.1
MSH6-206ENST00000455383 AFG1LQ8WV93 481 aa21.9■■□□□ 1.1
MSH6-206ENST00000455383 TBC1D5Q92609 795 aa21.9■■□□□ 1.1
MSH6-206ENST00000455383 KAT2BQ92831 832 aa21.9■■□□□ 1.1
MSH6-206ENST00000455383 UBA5Q9GZZ9 404 aa21.9■■□□□ 1.1
MSH6-206ENST00000455383 CPVLQ9H3G5 476 aa21.9■■□□□ 1.1
MSH6-206ENST00000455383 RNF41Q9H4P4 317 aaPredicted RBP21.9■■□□□ 1.1
MSH6-206ENST00000455383 COL20A1Q9P218 1284 aa21.9■■□□□ 1.1
MSH6-206ENST00000455383 COG5Q9UP83 839 aa21.9■■□□□ 1.1
MSH6-206ENST00000455383 NEDD4P46934 1319 aa21.89■■□□□ 1.1
MSH6-206ENST00000455383 LPXNO60711 386 aa21.89■■□□□ 1.09
MSH6-206ENST00000455383 KRT40Q6A162 431 aa21.89■■□□□ 1.09
MSH6-206ENST00000455383 GDF6Q6KF10 455 aaPredicted RBP21.89■■□□□ 1.09
MSH6-206ENST00000455383 ARNTL2Q8WYA1 636 aa21.89■■□□□ 1.09
MSH6-206ENST00000455383 DHX38Q92620 1227 aaKnown RBP21.89■■□□□ 1.09
MSH6-206ENST00000455383 ANKS1AQ92625 1134 aa21.89■■□□□ 1.09
MSH6-206ENST00000455383 ESR2Q92731 530 aa21.89■■□□□ 1.09
MSH6-206ENST00000455383 TAAR1Q96RJ0 339 aa21.89■■□□□ 1.09
MSH6-206ENST00000455383 NOD1Q9Y239 953 aa21.89■■□□□ 1.09
MSH6-206ENST00000455383 PTPRSQ13332 1948 aa21.88■■□□□ 1.09
MSH6-206ENST00000455383 ABCB11O95342 1321 aa21.88■■□□□ 1.09
MSH6-206ENST00000455383 GH1P01241 217 aa21.88■■□□□ 1.09
MSH6-206ENST00000455383 SKIV2LQ15477 1246 aaKnown RBP21.88■■□□□ 1.09
MSH6-206ENST00000455383 CDC37Q16543 378 aaPredicted RBP21.88■■□□□ 1.09
MSH6-206ENST00000455383 CCDC155Q8N6L0 562 aa21.88■■□□□ 1.09
MSH6-206ENST00000455383 NSUN6Q8TEA1 469 aaKnown RBP21.88■■□□□ 1.09
MSH6-206ENST00000455383 IWS1Q96ST2 819 aa21.88■■□□□ 1.09
MSH6-206ENST00000455383 ZKSCAN3Q9BRR0 538 aa21.88■■□□□ 1.09
MSH6-206ENST00000455383 TRIP12Q14669 1992 aaPredicted RBP21.87■■□□□ 1.09
MSH6-206ENST00000455383 TLL1O43897 1013 aa21.87■■□□□ 1.09
MSH6-206ENST00000455383 CXCL10P02778 98 aa21.87■■□□□ 1.09
MSH6-206ENST00000455383 SELPP16109 830 aa21.87■■□□□ 1.09
MSH6-206ENST00000455383 WDR5P61964 334 aaKnown RBP21.87■■□□□ 1.09
MSH6-206ENST00000455383 GRB10Q13322 594 aa21.87■■□□□ 1.09
MSH6-206ENST00000455383 LY6KQ17RY6 165 aa21.87■■□□□ 1.09
MSH6-206ENST00000455383 PARNO95453 639 aaKnown RBP21.86■■□□□ 1.09
MSH6-206ENST00000455383 CASTP20810 708 aaKnown RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms