RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 MPHOSPH6Q99547 160 aaKnown RBP32.22■■■□□ 2.75
SMARCC1-203ENST00000454240 B4DLN1 442 aa32.21■■■□□ 2.75
SMARCC1-203ENST00000454240 MSCO60682 206 aa32.21■■■□□ 2.75
SMARCC1-203ENST00000454240 CAPN2P17655 700 aa32.21■■■□□ 2.75
SMARCC1-203ENST00000454240 MRPL12P52815 198 aaKnown RBP32.21■■■□□ 2.75
SMARCC1-203ENST00000454240 NAPAP54920 295 aa32.21■■■□□ 2.75
SMARCC1-203ENST00000454240 TRIM22Q8IYM9 498 aa32.21■■■□□ 2.75
SMARCC1-203ENST00000454240 NECAB1Q8N987 351 aa32.21■■■□□ 2.75
SMARCC1-203ENST00000454240 SHISA4Q96DD7 197 aa32.21■■■□□ 2.75
SMARCC1-203ENST00000454240 IWS1Q96ST2 819 aa32.21■■■□□ 2.75
SMARCC1-203ENST00000454240 PXMP2Q9NR77 195 aa32.21■■■□□ 2.75
SMARCC1-203ENST00000454240 USP17L6PQ6QN14 398 aa32.2■■■□□ 2.75
SMARCC1-203ENST00000454240 CUL5Q93034 780 aa32.2■■■□□ 2.75
SMARCC1-203ENST00000454240 ZHX1Q9UKY1 873 aaPredicted RBP32.2■■■□□ 2.75
SMARCC1-203ENST00000454240 CDKL5O76039 1030 aa32.19■■■□□ 2.74
SMARCC1-203ENST00000454240 CTDNEP1O95476 244 aa32.19■■■□□ 2.74
SMARCC1-203ENST00000454240 IFFO2Q5TF58 517 aa32.19■■■□□ 2.74
SMARCC1-203ENST00000454240 ARHGEF16Q5VV41 709 aa32.19■■■□□ 2.74
SMARCC1-203ENST00000454240 FCHSD1Q86WN1 690 aa32.19■■■□□ 2.74
SMARCC1-203ENST00000454240 TEX2Q8IWB9 1127 aa32.19■■■□□ 2.74
SMARCC1-203ENST00000454240 SMARCC2Q8TAQ2 1214 aa32.19■■■□□ 2.74
SMARCC1-203ENST00000454240 VTA1Q9NP79 307 aa32.19■■■□□ 2.74
SMARCC1-203ENST00000454240 OGDHLQ9ULD0 1010 aa32.19■■■□□ 2.74
SMARCC1-203ENST00000454240 KIAA1217Q5T5P2 1943 aa32.18■■■□□ 2.74
SMARCC1-203ENST00000454240 TFRCP02786 760 aaKnown RBP32.18■■■□□ 2.74
SMARCC1-203ENST00000454240 AKR1A1P14550 325 aa32.18■■■□□ 2.74
SMARCC1-203ENST00000454240 PDE4DQ08499 809 aa32.18■■■□□ 2.74
SMARCC1-203ENST00000454240 TAPT1Q6NXT6 567 aa32.18■■■□□ 2.74
SMARCC1-203ENST00000454240 RIC8AQ9NPQ8 531 aa32.18■■■□□ 2.74
SMARCC1-203ENST00000454240 FAM184BQ9ULE4 1060 aa32.18■■■□□ 2.74
SMARCC1-203ENST00000454240 SMCO2A6NFE2 343 aa32.17■■■□□ 2.74
SMARCC1-203ENST00000454240 ST18O60284 1047 aa32.17■■■□□ 2.74
SMARCC1-203ENST00000454240 DEXIO95424 95 aa32.17■■■□□ 2.74
SMARCC1-203ENST00000454240 EIF2AK2P19525 551 aaKnown RBP32.17■■■□□ 2.74
SMARCC1-203ENST00000454240 CCDC144BQ3MJ40 725 aa32.17■■■□□ 2.74
SMARCC1-203ENST00000454240 EEPD1Q7L9B9 569 aa32.17■■■□□ 2.74
SMARCC1-203ENST00000454240 FBXO16Q8IX29 292 aaPredicted RBP32.17■■■□□ 2.74
SMARCC1-203ENST00000454240 ZSCAN31Q96LW9 406 aaPredicted RBP32.17■■■□□ 2.74
SMARCC1-203ENST00000454240 PDCD2LQ9BRP1 358 aa32.17■■■□□ 2.74
SMARCC1-203ENST00000454240 ST3GAL1Q11201 340 aa32.16■■■□□ 2.74
SMARCC1-203ENST00000454240 FRMPD4Q14CM0 1322 aa32.16■■■□□ 2.74
SMARCC1-203ENST00000454240 STK36Q9NRP7 1315 aa32.16■■■□□ 2.74
SMARCC1-203ENST00000454240 ESYT2A0FGR8 921 aa32.15■■■□□ 2.74
SMARCC1-203ENST00000454240 NR3C2P08235 984 aa32.15■■■□□ 2.74
SMARCC1-203ENST00000454240 RGS19P49795 217 aa32.15■■■□□ 2.74
SMARCC1-203ENST00000454240 UBE2SQ16763 222 aa32.15■■■□□ 2.74
SMARCC1-203ENST00000454240 ANO1Q5XXA6 986 aa32.15■■■□□ 2.74
SMARCC1-203ENST00000454240 CCDC12Q8WUD4 166 aaPredicted RBP32.15■■■□□ 2.74
SMARCC1-203ENST00000454240 ZMYND12Q9H0C1 365 aa32.15■■■□□ 2.74
SMARCC1-203ENST00000454240 GLT8D2Q9H1C3 349 aa32.15■■■□□ 2.74
SMARCC1-203ENST00000454240 PDGFCQ9NRA1 345 aa32.15■■■□□ 2.74
SMARCC1-203ENST00000454240 ADCY7P51828 1080 aa32.14■■■□□ 2.74
SMARCC1-203ENST00000454240 PGM5Q15124 567 aa32.14■■■□□ 2.74
SMARCC1-203ENST00000454240 STXBP2Q15833 593 aa32.14■■■□□ 2.74
SMARCC1-203ENST00000454240 SH3GLB2Q9NR46 395 aa32.14■■■□□ 2.74
SMARCC1-203ENST00000454240 RBM47A0AV96 593 aaKnown RBP32.13■■■□□ 2.73
SMARCC1-203ENST00000454240 ADCY6O43306 1168 aa32.13■■■□□ 2.73
SMARCC1-203ENST00000454240 IQSEC1Q6DN90 963 aa32.13■■■□□ 2.73
SMARCC1-203ENST00000454240 VSIG10LQ86VR7 867 aa32.13■■■□□ 2.73
SMARCC1-203ENST00000454240 SH2B1Q9NRF2 756 aaPredicted RBP32.13■■■□□ 2.73
SMARCC1-203ENST00000454240 RARBP10826 455 aa32.12■■■□□ 2.73
SMARCC1-203ENST00000454240 ADCYAP1R1P41586 468 aa32.12■■■□□ 2.73
SMARCC1-203ENST00000454240 CLK2P49760 499 aaKnown RBP32.12■■■□□ 2.73
SMARCC1-203ENST00000454240 ANKLE1Q8NAG6 615 aa32.12■■■□□ 2.73
SMARCC1-203ENST00000454240 NSUN7Q8NE18 718 aaKnown RBP32.12■■■□□ 2.73
SMARCC1-203ENST00000454240 VPS54Q9P1Q0 977 aa32.12■■■□□ 2.73
SMARCC1-203ENST00000454240 C11orf97A0A1B0GVM6 126 aaPredicted RBP32.11■■■□□ 2.73
SMARCC1-203ENST00000454240 DTNBO60941 627 aa32.11■■■□□ 2.73
SMARCC1-203ENST00000454240 DUSP11O75319 330 aaKnown RBP32.11■■■□□ 2.73
SMARCC1-203ENST00000454240 EIF3JO75822 258 aaKnown RBP32.11■■■□□ 2.73
SMARCC1-203ENST00000454240 CD2BP2O95400 341 aaKnown RBP32.11■■■□□ 2.73
SMARCC1-203ENST00000454240 CCDC148Q8NFR7 591 aa32.11■■■□□ 2.73
SMARCC1-203ENST00000454240 IL31RAQ8NI17 732 aa32.11■■■□□ 2.73
SMARCC1-203ENST00000454240 AIFM3Q96NN9 605 aa32.11■■■□□ 2.73
SMARCC1-203ENST00000454240 C6orf50Q9HD87 102 aa32.11■■■□□ 2.73
SMARCC1-203ENST00000454240 MYCLP12524 364 aaPredicted RBP32.1■■■□□ 2.73
SMARCC1-203ENST00000454240 FDPSP14324 419 aaKnown RBP32.1■■■□□ 2.73
SMARCC1-203ENST00000454240 MNX1P50219 401 aaPredicted RBP32.1■■■□□ 2.73
SMARCC1-203ENST00000454240 TNFAIP2Q03169 654 aa32.1■■■□□ 2.73
SMARCC1-203ENST00000454240 LENG1Q96BZ8 264 aaPredicted RBP32.1■■■□□ 2.73
SMARCC1-203ENST00000454240 ORC3Q9UBD5 711 aaPredicted RBP32.1■■■□□ 2.73
SMARCC1-203ENST00000454240 PCDHA6Q9UN73 950 aa32.1■■■□□ 2.73
SMARCC1-203ENST00000454240 PCDHA8Q9Y5H6 950 aa32.1■■■□□ 2.73
SMARCC1-203ENST00000454240 SPDYE3A6NKU9 549 aa32.09■■■□□ 2.73
SMARCC1-203ENST00000454240 GNA11P29992 359 aa32.09■■■□□ 2.73
SMARCC1-203ENST00000454240 CCND2P30279 289 aa32.09■■■□□ 2.73
SMARCC1-203ENST00000454240 UBE2Q1Q7Z7E8 422 aa32.09■■■□□ 2.73
SMARCC1-203ENST00000454240 CCDC83Q8IWF9 413 aa32.09■■■□□ 2.73
SMARCC1-203ENST00000454240 FAM177A1Q8N128 213 aaPredicted RBP32.09■■■□□ 2.73
SMARCC1-203ENST00000454240 XPNPEP3Q9NQH7 507 aa32.09■■■□□ 2.73
SMARCC1-203ENST00000454240 GNEQ9Y223 722 aaKnown RBP32.09■■■□□ 2.73
SMARCC1-203ENST00000454240 MKI67P46013 3256 aaKnown RBP32.09■■■□□ 2.73
SMARCC1-203ENST00000454240 FOSP01100 380 aaPredicted RBP32.08■■■□□ 2.73
SMARCC1-203ENST00000454240 SMPD1P17405 629 aa32.08■■■□□ 2.73
SMARCC1-203ENST00000454240 MCM2P49736 904 aa32.08■■■□□ 2.73
SMARCC1-203ENST00000454240 WDR11Q9BZH6 1224 aa32.08■■■□□ 2.73
SMARCC1-203ENST00000454240 ADAMTS3O15072 1205 aa32.07■■■□□ 2.72
SMARCC1-203ENST00000454240 JAK2O60674 1132 aa32.07■■■□□ 2.72
SMARCC1-203ENST00000454240 MRPS9P82933 396 aaKnown RBP32.07■■■□□ 2.72
SMARCC1-203ENST00000454240 TMEM63BQ5T3F8 832 aa32.07■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms