RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 TMEM105Q8N8V8 129 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 KLHDC9Q8NEP7 349 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 PHOSPHO2Q8TCD6 241 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 STK32AQ8WU08 396 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 TEKT1Q969V4 418 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 PABPC5Q96DU9 382 aaKnown RBP6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 HINFPQ9BQA5 517 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 ZNF395Q9H8N7 513 aaPredicted RBP6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 FAM50BQ9Y247 325 aa6.78□□□□□ -1.32
SBDSP1-204ENST00000453858 ITPR3Q14573 2671 aa6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 MYO9AB2RTY4 2548 aa6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 LCHNA4D1U4 455 aa6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 LOC730098B7Z3J9 87 aa6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 PATL2C9JE40 543 aaKnown RBP6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 ADAMTS4O75173 837 aa6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 SNRPBP14678 240 aaKnown RBP6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 TLR1Q15399 786 aa6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 WDR44Q5JSH3 913 aa6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 HHIPL2Q6UWX4 724 aa6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 CCDC191Q8NCU4 936 aa6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 ZNF280CQ8ND82 737 aa6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 POP1Q99575 1024 aaKnown RBP6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 WNT8AQ9H1J5 351 aa6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 XPNPEP3Q9NQH7 507 aa6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 SCHIP1Q9P0W5 487 aaPredicted RBP6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 SERTAD1Q9UHV2 236 aa6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 CHMP3Q9Y3E7 222 aa6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 COL4A4P53420 1690 aaPredicted RBP6.77□□□□□ -1.33
SBDSP1-204ENST00000453858 ELP1O95163 1332 aa6.76□□□□□ -1.33
SBDSP1-204ENST00000453858 DOPEY1Q5JWR5 2465 aa6.76□□□□□ -1.33
SBDSP1-204ENST00000453858 TERTO14746 1132 aaKnown RBP6.76□□□□□ -1.33
SBDSP1-204ENST00000453858 LMNAP02545 664 aaKnown RBP6.76□□□□□ -1.33
SBDSP1-204ENST00000453858 INSM1Q01101 510 aaPredicted RBP6.76□□□□□ -1.33
SBDSP1-204ENST00000453858 CDC42EP5Q6NZY7 148 aa6.76□□□□□ -1.33
SBDSP1-204ENST00000453858 RNF180Q86T96 592 aa6.76□□□□□ -1.33
SBDSP1-204ENST00000453858 HERC6Q8IVU3 1022 aa6.76□□□□□ -1.33
SBDSP1-204ENST00000453858 STAG2Q8N3U4 1231 aa6.76□□□□□ -1.33
SBDSP1-204ENST00000453858 RIPOR3Q96MK2 946 aa6.76□□□□□ -1.33
SBDSP1-204ENST00000453858 ZSCAN10Q96SZ4 725 aaPredicted RBP6.76□□□□□ -1.33
SBDSP1-204ENST00000453858 GRIP2Q9C0E4 1043 aa6.76□□□□□ -1.33
SBDSP1-204ENST00000453858 POLMQ9NP87 494 aaPredicted RBP6.76□□□□□ -1.33
SBDSP1-204ENST00000453858 STARD7Q9NQZ5 370 aa6.76□□□□□ -1.33
SBDSP1-204ENST00000453858 TMOD2Q9NZR1 351 aa6.76□□□□□ -1.33
SBDSP1-204ENST00000453858 CHPF2Q9P2E5 772 aa6.76□□□□□ -1.33
SBDSP1-204ENST00000453858 PCDHGC5Q9Y5F6 944 aa6.76□□□□□ -1.33
SBDSP1-204ENST00000453858 A0A1B0GUL7 405 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 ARVCFO00192 962 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 MBTPS2O43462 519 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 COBLO75128 1261 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 BRD1O95696 1058 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 IGHMBP2P38935 993 aaKnown RBP6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 KCNJ4P48050 445 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 EPHA4P54764 986 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 ERVK-21P61565 698 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 DLX2Q07687 328 aaPredicted RBP6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 RRP1BQ14684 758 aaKnown RBP6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 GNASQ5JWF2 1037 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 TRIM46Q7Z4K8 759 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 NPAS3Q8IXF0 933 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 DCLK2Q8N568 766 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 KCTD17Q8N5Z5 321 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 SLC43A3Q8NBI5 491 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 TSEN2Q8NCE0 465 aaKnown RBP6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 C1orf216Q8TAB5 229 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 NUP133Q8WUM0 1156 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 FAM84BQ96KN1 310 aaPredicted RBP6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 INSM2Q96T92 566 aaPredicted RBP6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 NIFKQ9BYG3 293 aaKnown RBP6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 SEMA4AQ9H3S1 761 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 RAB6BQ9NRW1 208 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 STK17AQ9UEE5 414 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 MTMR7Q9Y216 660 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 SPEF2Q9C093 1822 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 MROH7Q68CQ1 1323 aa6.75□□□□□ -1.33
SBDSP1-204ENST00000453858 DCDC2BA2VCK2 349 aa6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 TTLL8A6PVC2 850 aa6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 SPATA31C2B4DYI2 1134 aa6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 STXBP3O00186 592 aa6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 TAF4O00268 1085 aa6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 GLRX3O76003 335 aaKnown RBP6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 CSF1RP07333 972 aa6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 ARP10275 920 aa6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 WEE1P30291 646 aa6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 CCL23P55773 120 aa6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 PSMA6P60900 246 aaKnown RBP6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 KCNA10Q16322 511 aa6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 C6orf118Q5T5N4 469 aa6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 TMEM214Q6NUQ4 689 aaKnown RBP6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 RPUSD2Q8IZ73 545 aaKnown RBP6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 PURBQ96QR8 312 aaKnown RBP6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 NOC4LQ9BVI4 516 aaKnown RBP6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 RABGAP1Q9Y3P9 1069 aa6.74□□□□□ -1.33
SBDSP1-204ENST00000453858 PROS1P07225 676 aa6.73□□□□□ -1.33
SBDSP1-204ENST00000453858 RARBP10826 455 aa6.73□□□□□ -1.33
SBDSP1-204ENST00000453858 ITGA6P23229 1130 aa6.73□□□□□ -1.33
SBDSP1-204ENST00000453858 IRX3P78415 501 aaPredicted RBP6.73□□□□□ -1.33
SBDSP1-204ENST00000453858 TEAD4Q15561 434 aa6.73□□□□□ -1.33
SBDSP1-204ENST00000453858 LYSMD3Q7Z3D4 306 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms