RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 PPIP5K1Q6PFW1 1433 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 FANCD2Q9BXW9 1451 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 EME2A4GXA9 379 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 FAM229AH3BQW9 127 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 M0R082 166 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 MAP2K7O14733 419 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 TNFRSF10CO14798 259 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 ADCY3O60266 1144 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 DNAJA2O60884 412 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 SLU7O95391 586 aaKnown RBP4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 ADCY5O95622 1261 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 ECEL1O95672 775 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 TBC1D8O95759 1140 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 FESP07332 822 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 SPATA31C1P0DKV0 1188 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 TNNT1P13805 278 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 NAT1P18440 290 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 ADH7P40394 386 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 GATA4P43694 442 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 KCNJ6P48051 423 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 FNTAP49354 379 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 GSTM4Q03013 218 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 NEXNQ0ZGT2 675 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 IFT88Q13099 833 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 G3BP1Q13283 466 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 COL9A3Q14050 684 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 IQCB1Q15051 598 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 TM4SF20Q53R12 229 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 TMEM67Q5HYA8 995 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZC3H12BQ5HYM0 836 aaKnown RBP4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 WIPI1Q5MNZ9 446 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 TMEM201Q5SNT2 666 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 ANKRD45Q5TZF3 282 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 CDCP2Q5VXM1 449 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 OVOS1Q6IE37 1185 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 CPLX2Q6PUV4 134 aaKnown RBP4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 CYFIP1Q7L576 1253 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 NLRC3Q7RTR2 1065 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 BRAPQ7Z569 592 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 AMOTL1Q8IY63 956 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 C17orf53Q8N3J3 647 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZBTB38Q8NAP3 1195 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 ACRBPQ8NEB7 543 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZNF417Q8TAU3 575 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZFAND2BQ8WV99 257 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 DNAAF4Q8WXU2 420 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 KLHL6Q8WZ60 621 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 NINJ1Q92982 152 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 RBM17Q96I25 401 aaKnown RBP4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZNF587Q96SQ5 575 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 SLC9A7Q96T83 725 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 CRACR2AQ9BSW2 395 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZC3H12CQ9C0D7 883 aaKnown RBP4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 EPN3Q9H201 632 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 PHAXQ9H814 394 aaKnown RBP4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 CNNM2Q9H8M5 875 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 KRT82Q9NSB4 513 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 GMIPQ9P107 970 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZNF215Q9UL58 517 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 TUBGCP6Q96RT7 1819 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 ROCK1Q13464 1354 aa4.13□□□□□ -1.75
HMGB3P8-201ENST00000449709 ABCC10Q5T3U5 1492 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 CCDC163A0A0D9SF12 145 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 SYCE3A1L190 88 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 CHUKO15111 745 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 EPB41L2O43491 1005 aaKnown RBP4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 KCNQ2O43526 872 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 AHCYL1O43865 530 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 SUSD5O60279 629 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZNF862O60290 1169 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 OPA1O60313 960 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 EIF4EBP3O60516 100 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 PPFIA4O75335 1185 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 ALBP02768 609 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 S100BP04271 92 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 CYP11A1P05108 521 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 VDRP11473 427 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 POU3F3P20264 500 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 CDC25BP30305 580 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 SLFN5Q08AF3 891 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 SCRN1Q12765 414 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 GRIK5Q16478 980 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 C21orf62-AS1Q17RA5 79 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 NBPF8Q3BBV2 869 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 SLC10A6Q3KNW5 377 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 GJC2Q5T442 439 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 HHATQ5VTY9 493 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 GDF6Q6KF10 455 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZNF280DQ6N043 979 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 GBP6Q6ZN66 633 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 NFXL1Q6ZNB6 911 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 TTLL7Q6ZT98 887 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 HDXQ7Z353 690 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 SPATA21Q7Z572 469 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 THNSL2Q86YJ6 484 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 JAMLQ86YT9 394 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 MFN1Q8IWA4 741 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 NIM1KQ8IY84 436 aa4.12□□□□□ -1.75
HMGB3P8-201ENST00000449709 TDRD7Q8NHU6 1098 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms