RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 PURBQ96QR8 312 aaKnown RBP16.7■□□□□ 0.26
SHANK2-210ENST00000449116 PXMP2Q9NR77 195 aa16.7■□□□□ 0.26
SHANK2-210ENST00000449116 NOL7Q9UMY1 257 aaKnown RBP16.7■□□□□ 0.26
SHANK2-210ENST00000449116 ATP6V1DQ9Y5K8 247 aa16.7■□□□□ 0.26
SHANK2-210ENST00000449116 PLXNB2O15031 1838 aa16.7■□□□□ 0.26
SHANK2-210ENST00000449116 ZNF236Q9UL36 1845 aa16.69■□□□□ 0.26
SHANK2-210ENST00000449116 FKTNO75072 461 aa16.69■□□□□ 0.26
SHANK2-210ENST00000449116 TRAPPC10P48553 1259 aa16.69■□□□□ 0.26
SHANK2-210ENST00000449116 ZNF792Q3KQV3 632 aa16.69■□□□□ 0.26
SHANK2-210ENST00000449116 RILPL1Q5EBL4 403 aa16.69■□□□□ 0.26
SHANK2-210ENST00000449116 MYSM1Q5VVJ2 828 aa16.69■□□□□ 0.26
SHANK2-210ENST00000449116 DPP9Q86TI2 863 aa16.69■□□□□ 0.26
SHANK2-210ENST00000449116 JMYQ8N9B5 988 aa16.69■□□□□ 0.26
SHANK2-210ENST00000449116 SOCS4Q8WXH5 440 aa16.69■□□□□ 0.26
SHANK2-210ENST00000449116 ERO1AQ96HE7 468 aa16.69■□□□□ 0.26
SHANK2-210ENST00000449116 TRIM47Q96LD4 638 aa16.69■□□□□ 0.26
SHANK2-210ENST00000449116 NUDT12Q9BQG2 462 aa16.69■□□□□ 0.26
SHANK2-210ENST00000449116 ARHGAP39Q9C0H5 1083 aa16.69■□□□□ 0.26
SHANK2-210ENST00000449116 SLC5A4Q9NY91 659 aa16.69■□□□□ 0.26
SHANK2-210ENST00000449116 SOWAHBA6NEL2 793 aa16.68■□□□□ 0.26
SHANK2-210ENST00000449116 COBLO75128 1261 aa16.68■□□□□ 0.26
SHANK2-210ENST00000449116 EIF2AK2P19525 551 aaKnown RBP16.68■□□□□ 0.26
SHANK2-210ENST00000449116 ALDH5A1P51649 535 aaPredicted RBP16.68■□□□□ 0.26
SHANK2-210ENST00000449116 ARHGAP4P98171 946 aa16.68■□□□□ 0.26
SHANK2-210ENST00000449116 MAP2K5Q13163 448 aa16.68■□□□□ 0.26
SHANK2-210ENST00000449116 PGM5Q15124 567 aa16.68■□□□□ 0.26
SHANK2-210ENST00000449116 NEK8Q86SG6 692 aa16.68■□□□□ 0.26
SHANK2-210ENST00000449116 ZNF296Q8WUU4 475 aaPredicted RBP16.68■□□□□ 0.26
SHANK2-210ENST00000449116 CRYGNQ8WXF5 182 aa16.68■□□□□ 0.26
SHANK2-210ENST00000449116 PDCD2LQ9BRP1 358 aa16.68■□□□□ 0.26
SHANK2-210ENST00000449116 TSKSQ9UJT2 592 aa16.68■□□□□ 0.26
SHANK2-210ENST00000449116 LCTP09848 1927 aa16.67■□□□□ 0.26
SHANK2-210ENST00000449116 LOC102724159A0A0B4J2E5 919 aa16.67■□□□□ 0.26
SHANK2-210ENST00000449116 CYP3A4P08684 503 aa16.67■□□□□ 0.26
SHANK2-210ENST00000449116 RGS2P41220 211 aa16.67■□□□□ 0.26
SHANK2-210ENST00000449116 USP11P51784 963 aa16.67■□□□□ 0.26
SHANK2-210ENST00000449116 UBXN2AP68543 259 aa16.67■□□□□ 0.26
SHANK2-210ENST00000449116 PWP2Q15269 919 aaKnown RBP16.67■□□□□ 0.26
SHANK2-210ENST00000449116 FAM173BQ6P4H8 233 aa16.67■□□□□ 0.26
SHANK2-210ENST00000449116 CD99L2Q8TCZ2 262 aa16.67■□□□□ 0.26
SHANK2-210ENST00000449116 USP6NLQ92738 828 aa16.67■□□□□ 0.26
SHANK2-210ENST00000449116 FGD4Q96M96 766 aa16.67■□□□□ 0.26
SHANK2-210ENST00000449116 IWS1Q96ST2 819 aa16.67■□□□□ 0.26
SHANK2-210ENST00000449116 MPHOSPH6Q99547 160 aaKnown RBP16.67■□□□□ 0.26
SHANK2-210ENST00000449116 GJD2Q9UKL4 321 aa16.67■□□□□ 0.26
SHANK2-210ENST00000449116 DIS3Q9Y2L1 958 aaKnown RBP16.67■□□□□ 0.26
SHANK2-210ENST00000449116 ASTN1O14525 1302 aa16.67■□□□□ 0.26
SHANK2-210ENST00000449116 B4DLN1 442 aa16.66■□□□□ 0.26
SHANK2-210ENST00000449116 MGAMO43451 1857 aa16.66■□□□□ 0.26
SHANK2-210ENST00000449116 GNRH1P01148 92 aa16.66■□□□□ 0.26
SHANK2-210ENST00000449116 NR3C2P08235 984 aa16.66■□□□□ 0.26
SHANK2-210ENST00000449116 HOXC6P09630 235 aa16.66■□□□□ 0.26
SHANK2-210ENST00000449116 ATP2B1P20020 1258 aa16.66■□□□□ 0.26
SHANK2-210ENST00000449116 TOB1P50616 345 aaPredicted RBP16.66■□□□□ 0.26
SHANK2-210ENST00000449116 ARHGEF6Q15052 776 aa16.66■□□□□ 0.26
SHANK2-210ENST00000449116 LETM2Q2VYF4 491 aa16.66■□□□□ 0.26
SHANK2-210ENST00000449116 FOXD4L6Q3SYB3 417 aaPredicted RBP16.66■□□□□ 0.26
SHANK2-210ENST00000449116 TTC38Q5R3I4 469 aa16.66■□□□□ 0.26
SHANK2-210ENST00000449116 PCNX4Q63HM2 1172 aa16.66■□□□□ 0.26
SHANK2-210ENST00000449116 XRRA1Q6P2D8 792 aa16.66■□□□□ 0.26
SHANK2-210ENST00000449116 MOXD1Q6UVY6 613 aa16.66■□□□□ 0.26
SHANK2-210ENST00000449116 FOXD4L3Q6VB84 417 aaPredicted RBP16.66■□□□□ 0.26
SHANK2-210ENST00000449116 ZNF467Q7Z7K2 595 aaPredicted RBP16.66■□□□□ 0.26
SHANK2-210ENST00000449116 IL31RAQ8NI17 732 aa16.66■□□□□ 0.26
SHANK2-210ENST00000449116 ZNF396Q96N95 335 aaPredicted RBP16.66■□□□□ 0.26
SHANK2-210ENST00000449116 NAP1L4Q99733 375 aaKnown RBP16.66■□□□□ 0.26
SHANK2-210ENST00000449116 PCNTO95613 3336 aa16.65■□□□□ 0.26
SHANK2-210ENST00000449116 ASB14A6NK59 587 aa16.65■□□□□ 0.26
SHANK2-210ENST00000449116 EDIL3O43854 480 aa16.65■□□□□ 0.26
SHANK2-210ENST00000449116 CCNT1O60563 726 aaKnown RBP16.65■□□□□ 0.26
SHANK2-210ENST00000449116 GCFC2P16383 781 aaKnown RBP16.65■□□□□ 0.26
SHANK2-210ENST00000449116 EDNRBP24530 442 aa16.65■□□□□ 0.26
SHANK2-210ENST00000449116 HOXD10P28358 340 aa16.65■□□□□ 0.26
SHANK2-210ENST00000449116 CCND2P30279 289 aa16.65■□□□□ 0.26
SHANK2-210ENST00000449116 CIITAP33076 1130 aa16.65■□□□□ 0.26
SHANK2-210ENST00000449116 CAP1Q01518 475 aa16.65■□□□□ 0.26
SHANK2-210ENST00000449116 ATL3Q6DD88 541 aa16.65■□□□□ 0.26
SHANK2-210ENST00000449116 VSIG10LQ86VR7 867 aa16.65■□□□□ 0.26
SHANK2-210ENST00000449116 NPLOC4Q8TAT6 608 aa16.65■□□□□ 0.26
SHANK2-210ENST00000449116 TNPO1Q92973 898 aaKnown RBP16.65■□□□□ 0.26
SHANK2-210ENST00000449116 MAML3Q96JK9 1138 aa16.65■□□□□ 0.26
SHANK2-210ENST00000449116 APBA2Q99767 749 aa16.65■□□□□ 0.26
SHANK2-210ENST00000449116 ZNFX1Q9P2E3 1918 aaKnown RBP16.64■□□□□ 0.26
SHANK2-210ENST00000449116 ZSWIM8A7E2V4 1837 aa16.64■□□□□ 0.25
SHANK2-210ENST00000449116 CYP3A7-CYP3A51PA0A087WV96 503 aa16.64■□□□□ 0.25
SHANK2-210ENST00000449116 WNT7AO00755 349 aa16.64■□□□□ 0.25
SHANK2-210ENST00000449116 MYCLP12524 364 aaPredicted RBP16.64■□□□□ 0.25
SHANK2-210ENST00000449116 CYP2B6P20813 491 aa16.64■□□□□ 0.25
SHANK2-210ENST00000449116 CYP3A7P24462 503 aa16.64■□□□□ 0.25
SHANK2-210ENST00000449116 ZNF76P36508 570 aa16.64■□□□□ 0.25
SHANK2-210ENST00000449116 DNM1Q05193 864 aaKnown RBP16.64■□□□□ 0.25
SHANK2-210ENST00000449116 PRKCZQ05513 592 aa16.64■□□□□ 0.25
SHANK2-210ENST00000449116 ORC2Q13416 577 aaPredicted RBP16.64■□□□□ 0.25
SHANK2-210ENST00000449116 NBR1Q14596 966 aa16.64■□□□□ 0.25
SHANK2-210ENST00000449116 STXBP2Q15833 593 aa16.64■□□□□ 0.25
SHANK2-210ENST00000449116 PPP4R3AQ6IN85 833 aa16.64■□□□□ 0.25
SHANK2-210ENST00000449116 MORC4Q8TE76 937 aa16.64■□□□□ 0.25
SHANK2-210ENST00000449116 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.64■□□□□ 0.25
SHANK2-210ENST00000449116 PCDHB6Q9Y5E3 794 aa16.64■□□□□ 0.25
SHANK2-210ENST00000449116 MYH7BA7E2Y1 1941 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms