RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 KRT23Q9C075 422 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 BHMT2Q9H2M3 363 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 PLCB1Q9NQ66 1216 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 ITM2BQ9Y287 266 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 TMEM110-MUSTN1A8MSY1 372 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 KRT16P08779 473 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 PRLRP16471 622 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 SYKP43405 635 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 SERPINB4P48594 390 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 EZH2Q15910 746 aaKnown RBP11.78□□□□□ -0.52
LINC00342-202ENST00000448494 P3H1Q32P28 736 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 ZNF394Q53GI3 561 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 SOGA3Q5TF21 947 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 KLC3Q6P597 504 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 RNF10Q8N5U6 811 aaKnown RBP11.78□□□□□ -0.52
LINC00342-202ENST00000448494 DEPTORQ8TB45 409 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.78□□□□□ -0.52
LINC00342-202ENST00000448494 KLHL29Q96CT2 875 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 ECT2Q9H8V3 914 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 GDF3Q9NR23 364 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 SNRKQ9NRH2 765 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 INIPQ9NRY2 104 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 UBAP1Q9NZ09 502 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 RABL2BQ9UNT1 228 aa11.78□□□□□ -0.52
LINC00342-202ENST00000448494 MAGEA13PA6NCF6 341 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 TIMM44O43615 452 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 RAD21O60216 631 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 GNA14O95837 355 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 VARSP26640 1264 aaKnown RBP11.77□□□□□ -0.52
LINC00342-202ENST00000448494 PRKAR2BP31323 418 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 TRIM14Q14142 442 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 MAP7Q14244 749 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 GALNTL6Q49A17 601 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 SMUG1Q53HV7 270 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 FAM133BQ5BKY9 247 aaKnown RBP11.77□□□□□ -0.52
LINC00342-202ENST00000448494 HAUS3Q68CZ6 603 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 MAEAQ7L5Y9 396 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 LONP2Q86WA8 852 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 DZIP1Q86YF9 867 aaKnown RBP11.77□□□□□ -0.52
LINC00342-202ENST00000448494 PEX5LQ8IYB4 626 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 RAB3IPQ96QF0 476 aaPredicted RBP11.77□□□□□ -0.52
LINC00342-202ENST00000448494 CTAGE1Q96RT6 745 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 EIF2AQ9BY44 585 aaKnown RBP11.77□□□□□ -0.52
LINC00342-202ENST00000448494 TAOK3Q9H2K8 898 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 TBCCD1Q9NVR7 557 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 LARSQ9P2J5 1176 aaKnown RBP11.77□□□□□ -0.52
LINC00342-202ENST00000448494 CHMP2BQ9UQN3 213 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 SPO11Q9Y5K1 396 aa11.77□□□□□ -0.52
LINC00342-202ENST00000448494 TRPM2O94759 1503 aa11.77□□□□□ -0.53
LINC00342-202ENST00000448494 A0A0J9YVX5 310 aa11.77□□□□□ -0.53
LINC00342-202ENST00000448494 FAM237AA0A1B0GTK4 181 aa11.77□□□□□ -0.53
LINC00342-202ENST00000448494 LGR5O75473 907 aa11.77□□□□□ -0.53
LINC00342-202ENST00000448494 MMEP08473 750 aa11.77□□□□□ -0.53
LINC00342-202ENST00000448494 RXRBP28702 533 aa11.77□□□□□ -0.53
LINC00342-202ENST00000448494 HSPA9P38646 679 aaKnown RBP11.77□□□□□ -0.53
LINC00342-202ENST00000448494 CACNA2D1P54289 1103 aa11.77□□□□□ -0.53
LINC00342-202ENST00000448494 MRPS25P82663 173 aaKnown RBP11.77□□□□□ -0.53
LINC00342-202ENST00000448494 PDE4BQ07343 736 aa11.77□□□□□ -0.53
LINC00342-202ENST00000448494 ERMARDQ5T6L9 678 aa11.77□□□□□ -0.53
LINC00342-202ENST00000448494 RASIP1Q5U651 963 aa11.77□□□□□ -0.53
LINC00342-202ENST00000448494 CREG2Q8IUH2 290 aa11.77□□□□□ -0.53
LINC00342-202ENST00000448494 RBBP8NLQ8NC74 664 aaPredicted RBP11.77□□□□□ -0.53
LINC00342-202ENST00000448494 SPATA4Q8NEY3 305 aa11.77□□□□□ -0.53
LINC00342-202ENST00000448494 ASAP3Q8TDY4 903 aa11.77□□□□□ -0.53
LINC00342-202ENST00000448494 SH3TC2Q8TF17 1288 aa11.77□□□□□ -0.53
LINC00342-202ENST00000448494 CPLX3Q8WVH0 158 aa11.77□□□□□ -0.53
LINC00342-202ENST00000448494 FAM129AQ9BZQ8 928 aa11.77□□□□□ -0.53
LINC00342-202ENST00000448494 ABHD10Q9NUJ1 306 aa11.77□□□□□ -0.53
LINC00342-202ENST00000448494 EPN1Q9Y6I3 576 aaPredicted RBP11.77□□□□□ -0.53
LINC00342-202ENST00000448494 GYPCP04921 128 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 ITGA2BP08514 1039 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 PDGFRBP09619 1106 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 CEBPAP49715 358 aaPredicted RBP11.76□□□□□ -0.53
LINC00342-202ENST00000448494 RAD23BP54727 409 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 MTTPP55157 894 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 ARPC4P59998 168 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 COPS2P61201 443 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 KRT32Q14532 448 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 PACS1Q6VY07 963 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 RSPH3Q86UC2 560 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 ENDOVQ8N8Q3 282 aaKnown RBP11.76□□□□□ -0.53
LINC00342-202ENST00000448494 STK32AQ8WU08 396 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 RETREG1Q9H6L5 497 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 SAMD15Q9P1V8 674 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 HSFX1Q9UBD0 423 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 HESX1Q9UBX0 185 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 IQSEC3Q9UPP2 1182 aaPredicted RBP11.76□□□□□ -0.53
LINC00342-202ENST00000448494 HPSEQ9Y251 543 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 PLAAQ9Y263 795 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 A8MUI8 341 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 GLRX3O76003 335 aaKnown RBP11.76□□□□□ -0.53
LINC00342-202ENST00000448494 NDUFA10O95299 355 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 TMOD1P28289 359 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 ZC3H6P61129 1189 aaKnown RBP11.76□□□□□ -0.53
LINC00342-202ENST00000448494 HPCAP84074 193 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 BNIP1Q12981 228 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 PLS1Q14651 629 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 RCN1Q15293 331 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 INAQ16352 499 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 DAB2IPQ5VWQ8 1189 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms