RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 PMS1P54277 932 aaKnown RBP19.59■□□□□ 0.73
SMC6-206ENST00000446852 ASIC1P78348 528 aa19.59■□□□□ 0.73
SMC6-206ENST00000446852 TNIP1Q15025 636 aa19.59■□□□□ 0.73
SMC6-206ENST00000446852 R3HDM1Q15032 1099 aaKnown RBP19.59■□□□□ 0.73
SMC6-206ENST00000446852 ZYXQ15942 572 aaKnown RBP19.59■□□□□ 0.73
SMC6-206ENST00000446852 CCAR2Q8N163 923 aaKnown RBP19.59■□□□□ 0.73
SMC6-206ENST00000446852 NAP1L4Q99733 375 aaKnown RBP19.59■□□□□ 0.73
SMC6-206ENST00000446852 KCNMB3Q9NPA1 279 aa19.59■□□□□ 0.73
SMC6-206ENST00000446852 BCS1LQ9Y276 419 aa19.59■□□□□ 0.73
SMC6-206ENST00000446852 ZNF280AP59817 542 aaPredicted RBP19.59■□□□□ 0.73
SMC6-206ENST00000446852 ARHGAP4P98171 946 aa19.59■□□□□ 0.73
SMC6-206ENST00000446852 SEMA3FQ13275 785 aa19.59■□□□□ 0.73
SMC6-206ENST00000446852 MCM6Q14566 821 aa19.59■□□□□ 0.73
SMC6-206ENST00000446852 ECM1Q16610 540 aa19.59■□□□□ 0.73
SMC6-206ENST00000446852 TMEM119Q4V9L6 283 aa19.59■□□□□ 0.73
SMC6-206ENST00000446852 KRT79Q5XKE5 535 aa19.59■□□□□ 0.73
SMC6-206ENST00000446852 KCNK18Q7Z418 384 aa19.59■□□□□ 0.73
SMC6-206ENST00000446852 SGIP1Q9BQI5 828 aa19.59■□□□□ 0.73
SMC6-206ENST00000446852 TMX1Q9H3N1 280 aa19.59■□□□□ 0.73
SMC6-206ENST00000446852 VCPKMTQ9H867 229 aa19.59■□□□□ 0.73
SMC6-206ENST00000446852 KCND1Q9NSA2 647 aa19.59■□□□□ 0.73
SMC6-206ENST00000446852 PCDHA12Q9UN75 941 aa19.59■□□□□ 0.73
SMC6-206ENST00000446852 RASA3Q14644 834 aa19.58■□□□□ 0.73
SMC6-206ENST00000446852 E4F1Q66K89 784 aaPredicted RBP19.58■□□□□ 0.73
SMC6-206ENST00000446852 LARP4BQ92615 738 aaKnown RBP19.58■□□□□ 0.73
SMC6-206ENST00000446852 CDK5RAP3Q96JB5 506 aa19.58■□□□□ 0.73
SMC6-206ENST00000446852 HOXA13P31271 388 aaPredicted RBP19.58■□□□□ 0.72
SMC6-206ENST00000446852 PRELPP51888 382 aa19.58■□□□□ 0.72
SMC6-206ENST00000446852 AMPD3Q01432 767 aa19.58■□□□□ 0.72
SMC6-206ENST00000446852 RASSF7Q02833 373 aa19.58■□□□□ 0.72
SMC6-206ENST00000446852 PDE4DQ08499 809 aa19.58■□□□□ 0.72
SMC6-206ENST00000446852 KRT31Q15323 416 aa19.58■□□□□ 0.72
SMC6-206ENST00000446852 SV2BQ7L1I2 683 aa19.58■□□□□ 0.72
SMC6-206ENST00000446852 TRMT1Q9NXH9 659 aaKnown RBP19.58■□□□□ 0.72
SMC6-206ENST00000446852 MYMKA6NI61 221 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 MARCH6O60337 910 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 TPM2P07951 284 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 PBX1P40424 430 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 MOXD1Q6UVY6 613 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 RAD54LQ92698 747 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 TEPSINQ96N21 525 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 CTAGE1Q96RT6 745 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 EXOC1Q9NV70 894 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 LIMA1Q9UHB6 759 aaKnown RBP19.57■□□□□ 0.72
SMC6-206ENST00000446852 UQCRHLA0A096LP55 91 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 UQCRHP07919 91 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 FCER1AP12319 257 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 SREBF1P36956 1147 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 KCNJ6P48051 423 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 STK4Q13043 487 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 IRF2BP1Q8IU81 584 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 TMEM139Q8IV31 216 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 TC2NQ8N9U0 490 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 PRIMPOLQ96LW4 560 aa19.57■□□□□ 0.72
SMC6-206ENST00000446852 ASTN2O75129 1339 aaPredicted RBP19.56■□□□□ 0.72
SMC6-206ENST00000446852 SPDYE3A6NKU9 549 aa19.56■□□□□ 0.72
SMC6-206ENST00000446852 PHF20L1A8MW92 1017 aa19.56■□□□□ 0.72
SMC6-206ENST00000446852 CCT6AP40227 531 aaKnown RBP19.56■□□□□ 0.72
SMC6-206ENST00000446852 MCTP2Q6DN12 878 aa19.56■□□□□ 0.72
SMC6-206ENST00000446852 HPS3Q969F9 1004 aa19.56■□□□□ 0.72
SMC6-206ENST00000446852 LENG9Q96B70 501 aa19.56■□□□□ 0.72
SMC6-206ENST00000446852 LRRC10BA6NIK2 292 aa19.56■□□□□ 0.72
SMC6-206ENST00000446852 ASNSP08243 561 aa19.56■□□□□ 0.72
SMC6-206ENST00000446852 TNNT1P13805 278 aa19.56■□□□□ 0.72
SMC6-206ENST00000446852 TCP11X2Q5H9J9 407 aa19.56■□□□□ 0.72
SMC6-206ENST00000446852 NYAP1Q6ZVC0 841 aa19.56■□□□□ 0.72
SMC6-206ENST00000446852 CCDC112Q8NEF3 446 aa19.56■□□□□ 0.72
SMC6-206ENST00000446852 ETNPPLQ8TBG4 499 aa19.56■□□□□ 0.72
SMC6-206ENST00000446852 KIFC2Q96AC6 838 aa19.56■□□□□ 0.72
SMC6-206ENST00000446852 RANBP17Q9H2T7 1088 aaKnown RBP19.56■□□□□ 0.72
SMC6-206ENST00000446852 KCNJ18B7U540 433 aa19.55■□□□□ 0.72
SMC6-206ENST00000446852 FAM86B1E9PN63 330 aa19.55■□□□□ 0.72
SMC6-206ENST00000446852 PSMA7O14818 248 aa19.55■□□□□ 0.72
SMC6-206ENST00000446852 FOSP01100 380 aaPredicted RBP19.55■□□□□ 0.72
SMC6-206ENST00000446852 FAM86B2P0C5J1 330 aa19.55■□□□□ 0.72
SMC6-206ENST00000446852 RPS12P25398 132 aaKnown RBP19.55■□□□□ 0.72
SMC6-206ENST00000446852 GMPSP49915 693 aaPredicted RBP19.55■□□□□ 0.72
SMC6-206ENST00000446852 ADKP55263 362 aaKnown RBP19.55■□□□□ 0.72
SMC6-206ENST00000446852 STIM1Q13586 685 aa19.55■□□□□ 0.72
SMC6-206ENST00000446852 KCNJ12Q14500 433 aa19.55■□□□□ 0.72
SMC6-206ENST00000446852 PRR16Q569H4 304 aa19.55■□□□□ 0.72
SMC6-206ENST00000446852 TTI2Q6NXR4 508 aa19.55■□□□□ 0.72
SMC6-206ENST00000446852 CCDC174Q6PII3 467 aa19.55■□□□□ 0.72
SMC6-206ENST00000446852 FBXO28Q9NVF7 368 aa19.55■□□□□ 0.72
SMC6-206ENST00000446852 CD2APQ9Y5K6 639 aa19.55■□□□□ 0.72
SMC6-206ENST00000446852 LTBP3Q9NS15 1303 aa19.55■□□□□ 0.72
SMC6-206ENST00000446852 PIK3CDO00329 1044 aa19.54■□□□□ 0.72
SMC6-206ENST00000446852 NRDCO43847 1150 aa19.54■□□□□ 0.72
SMC6-206ENST00000446852 SAMD7Q7Z3H4 446 aa19.54■□□□□ 0.72
SMC6-206ENST00000446852 MICALL2Q8IY33 904 aa19.54■□□□□ 0.72
SMC6-206ENST00000446852 KIAA0895Q8NCT3 520 aa19.54■□□□□ 0.72
SMC6-206ENST00000446852 CCDC47Q96A33 483 aaKnown RBP19.54■□□□□ 0.72
SMC6-206ENST00000446852 SH2D4AQ9H788 454 aa19.54■□□□□ 0.72
SMC6-206ENST00000446852 H7C1D1 291 aa19.54■□□□□ 0.72
SMC6-206ENST00000446852 SPAG1Q07617 926 aa19.54■□□□□ 0.72
SMC6-206ENST00000446852 HYIQ5T013 277 aa19.54■□□□□ 0.72
SMC6-206ENST00000446852 DYMQ7RTS9 669 aa19.54■□□□□ 0.72
SMC6-206ENST00000446852 CHURC1Q8WUH1 139 aa19.54■□□□□ 0.72
SMC6-206ENST00000446852 TAB2Q9NYJ8 693 aa19.54■□□□□ 0.72
SMC6-206ENST00000446852 STAT3P40763 770 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms