RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 KATNBL1Q9H079 304 aa20.41■□□□□ 0.86
CCDC188-201ENST00000439765 XPNPEP3Q9NQH7 507 aa20.41■□□□□ 0.86
CCDC188-201ENST00000439765 FAM217BQ9NTX9 383 aaPredicted RBP20.41■□□□□ 0.86
CCDC188-201ENST00000439765 SOX1O00570 391 aaPredicted RBP20.4■□□□□ 0.86
CCDC188-201ENST00000439765 C1orf53Q5VUE5 145 aa20.4■□□□□ 0.86
CCDC188-201ENST00000439765 SLC39A5Q6ZMH5 540 aa20.4■□□□□ 0.86
CCDC188-201ENST00000439765 TDHQ8IZJ6 230 aa20.4■□□□□ 0.86
CCDC188-201ENST00000439765 PHF24Q9UPV7 400 aa20.4■□□□□ 0.86
CCDC188-201ENST00000439765 ADCY6O43306 1168 aa20.39■□□□□ 0.85
CCDC188-201ENST00000439765 ADD1P35611 737 aaKnown RBP20.39■□□□□ 0.85
CCDC188-201ENST00000439765 HSD17B4P51659 736 aa20.39■□□□□ 0.85
CCDC188-201ENST00000439765 FUT2Q10981 343 aa20.39■□□□□ 0.85
CCDC188-201ENST00000439765 CCDC144BQ3MJ40 725 aa20.39■□□□□ 0.85
CCDC188-201ENST00000439765 LRIT3Q3SXY7 679 aa20.39■□□□□ 0.85
CCDC188-201ENST00000439765 HEATR3Q7Z4Q2 680 aa20.39■□□□□ 0.85
CCDC188-201ENST00000439765 DNERQ8NFT8 737 aa20.39■□□□□ 0.85
CCDC188-201ENST00000439765 GPKOWQ92917 476 aaPredicted RBP eCLIP20.39■□□□□ 0.85
CCDC188-201ENST00000439765 UBE2OQ9C0C9 1292 aaKnown RBP20.39■□□□□ 0.85
CCDC188-201ENST00000439765 PDE4DQ08499 809 aa20.38■□□□□ 0.85
CCDC188-201ENST00000439765 RNF180Q86T96 592 aa20.38■□□□□ 0.85
CCDC188-201ENST00000439765 TAAR1Q96RJ0 339 aa20.38■□□□□ 0.85
CCDC188-201ENST00000439765 NCOA5Q9HCD5 579 aaKnown RBP20.38■□□□□ 0.85
CCDC188-201ENST00000439765 FAM184BQ9ULE4 1060 aa20.38■□□□□ 0.85
CCDC188-201ENST00000439765 CCDC196A0A1B0GTZ2 297 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 ADAMTS4O75173 837 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 EIF2AK2P19525 551 aaKnown RBP20.37■□□□□ 0.85
CCDC188-201ENST00000439765 PDIA3P30101 505 aaKnown RBP20.37■□□□□ 0.85
CCDC188-201ENST00000439765 ADCYAP1R1P41586 468 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 NEK4P51957 841 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 EVCP57679 992 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 CCT2P78371 535 aaKnown RBP20.37■□□□□ 0.85
CCDC188-201ENST00000439765 IL27Q8NEV9 243 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 MORC4Q8TE76 937 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 LRCH3Q96II8 777 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 RMDN3Q96TC7 470 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 MPHOSPH6Q99547 160 aaKnown RBP20.37■□□□□ 0.85
CCDC188-201ENST00000439765 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.37■□□□□ 0.85
CCDC188-201ENST00000439765 GCOM1H8Y6P7 765 aaPredicted RBP20.37■□□□□ 0.85
CCDC188-201ENST00000439765 PPFIA3O75145 1194 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 PGK1P00558 417 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 POLR2MP0CAP2 368 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 MDM2Q00987 491 aaPredicted RBP20.37■□□□□ 0.85
CCDC188-201ENST00000439765 GHRHRQ02643 423 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 STK3Q13188 491 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 PPP2R5BQ15173 497 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 GPR153Q6NV75 609 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 FCHSD1Q86WN1 690 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 MAF1Q9H063 256 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 VTA1Q9NP79 307 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 PDGFCQ9NRA1 345 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 ATP11BQ9Y2G3 1177 aa20.37■□□□□ 0.85
CCDC188-201ENST00000439765 RBM19Q9Y4C8 960 aaKnown RBP20.37■□□□□ 0.85
CCDC188-201ENST00000439765 SYNRGQ9UMZ2 1314 aa20.36■□□□□ 0.85
CCDC188-201ENST00000439765 LOC102724159A0A0B4J2E5 919 aa20.36■□□□□ 0.85
CCDC188-201ENST00000439765 EDNRBP24530 442 aa20.36■□□□□ 0.85
CCDC188-201ENST00000439765 PWP2Q15269 919 aaKnown RBP20.36■□□□□ 0.85
CCDC188-201ENST00000439765 TRIM60Q495X7 471 aa20.36■□□□□ 0.85
CCDC188-201ENST00000439765 ARHGEF16Q5VV41 709 aa20.36■□□□□ 0.85
CCDC188-201ENST00000439765 WWC2Q6AWC2 1192 aa20.36■□□□□ 0.85
CCDC188-201ENST00000439765 NOL8Q76FK4 1167 aaKnown RBP20.36■□□□□ 0.85
CCDC188-201ENST00000439765 NSUN6Q8TEA1 469 aaKnown RBP20.36■□□□□ 0.85
CCDC188-201ENST00000439765 PHKBQ93100 1093 aa20.36■□□□□ 0.85
CCDC188-201ENST00000439765 FERMT2Q96AC1 680 aa20.36■□□□□ 0.85
CCDC188-201ENST00000439765 TSEN34Q9BSV6 310 aaKnown RBP20.36■□□□□ 0.85
CCDC188-201ENST00000439765 PXMP2Q9NR77 195 aa20.36■□□□□ 0.85
CCDC188-201ENST00000439765 PRKAG2Q9UGJ0 569 aa20.36■□□□□ 0.85
CCDC188-201ENST00000439765 V9GY48 417 aaPredicted RBP20.36■□□□□ 0.85
CCDC188-201ENST00000439765 DUSP11O75319 330 aaKnown RBP20.35■□□□□ 0.85
CCDC188-201ENST00000439765 PTGS1P23219 599 aa20.35■□□□□ 0.85
CCDC188-201ENST00000439765 AK2P54819 239 aa20.35■□□□□ 0.85
CCDC188-201ENST00000439765 LBHD1Q9BQE6 289 aaPredicted RBP20.35■□□□□ 0.85
CCDC188-201ENST00000439765 ALDH8A1Q9H2A2 487 aaPredicted RBP20.35■□□□□ 0.85
CCDC188-201ENST00000439765 TNFAIP2Q03169 654 aa20.34■□□□□ 0.85
CCDC188-201ENST00000439765 TAPT1Q6NXT6 567 aa20.34■□□□□ 0.85
CCDC188-201ENST00000439765 USP17L6PQ6QN14 398 aa20.34■□□□□ 0.85
CCDC188-201ENST00000439765 KLHDC9Q8NEP7 349 aa20.34■□□□□ 0.85
CCDC188-201ENST00000439765 PDLIM7Q9NR12 457 aa20.34■□□□□ 0.85
CCDC188-201ENST00000439765 MAP3K20Q9NYL2 800 aaKnown RBP20.34■□□□□ 0.85
CCDC188-201ENST00000439765 DOCK5Q9H7D0 1870 aa20.34■□□□□ 0.85
CCDC188-201ENST00000439765 A0A1W2PQ45 241 aaPredicted RBP20.33■□□□□ 0.85
CCDC188-201ENST00000439765 A0A1W2PQY0 241 aa20.33■□□□□ 0.85
CCDC188-201ENST00000439765 B4DLN1 442 aa20.33■□□□□ 0.85
CCDC188-201ENST00000439765 ST18O60284 1047 aa20.33■□□□□ 0.85
CCDC188-201ENST00000439765 CST5P28325 142 aaPredicted RBP20.33■□□□□ 0.85
CCDC188-201ENST00000439765 MRPL12P52815 198 aaKnown RBP20.33■□□□□ 0.85
CCDC188-201ENST00000439765 NAPAP54920 295 aa20.33■□□□□ 0.85
CCDC188-201ENST00000439765 IRX5P78411 483 aaPredicted RBP20.33■□□□□ 0.85
CCDC188-201ENST00000439765 TMEM63BQ5T3F8 832 aa20.33■□□□□ 0.85
CCDC188-201ENST00000439765 TYW1BQ6NUM6 668 aa20.33■□□□□ 0.85
CCDC188-201ENST00000439765 IL31RAQ8NI17 732 aa20.33■□□□□ 0.85
CCDC188-201ENST00000439765 SMARCC2Q8TAQ2 1214 aa20.33■□□□□ 0.85
CCDC188-201ENST00000439765 CUL5Q93034 780 aa20.33■□□□□ 0.85
CCDC188-201ENST00000439765 ZNF274Q96GC6 653 aaPredicted RBP20.33■□□□□ 0.85
CCDC188-201ENST00000439765 TPCN1Q9ULQ1 816 aa20.33■□□□□ 0.85
CCDC188-201ENST00000439765 MYH7BA7E2Y1 1941 aa20.33■□□□□ 0.85
CCDC188-201ENST00000439765 MYADML2A6NDP7 307 aa20.32■□□□□ 0.84
CCDC188-201ENST00000439765 MOXD2PA6NHM9 499 aa20.32■□□□□ 0.84
CCDC188-201ENST00000439765 STXBP3O00186 592 aa20.32■□□□□ 0.84
CCDC188-201ENST00000439765 C6orf222P0C671 652 aaPredicted RBP20.32■□□□□ 0.84
CCDC188-201ENST00000439765 SMPD1P17405 629 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms