RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 LMNB1P20700 586 aa12.7□□□□□ -0.38
PTCH1-208ENST00000430669 P2RX5Q93086 422 aa12.7□□□□□ -0.38
PTCH1-208ENST00000430669 BCL9O00512 1426 aa12.7□□□□□ -0.38
PTCH1-208ENST00000430669 RIOK3O14730 519 aaKnown RBP12.7□□□□□ -0.38
PTCH1-208ENST00000430669 MYCNP04198 464 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-208ENST00000430669 CCDC170Q8IYT3 715 aa12.7□□□□□ -0.38
PTCH1-208ENST00000430669 DEPTORQ8TB45 409 aa12.7□□□□□ -0.38
PTCH1-208ENST00000430669 TUBGCP2Q9BSJ2 902 aa12.7□□□□□ -0.38
PTCH1-208ENST00000430669 HAUS4Q9H6D7 363 aa12.7□□□□□ -0.38
PTCH1-208ENST00000430669 PDS5AQ29RF7 1337 aaKnown RBP12.7□□□□□ -0.38
PTCH1-208ENST00000430669 UBN2Q6ZU65 1347 aa12.7□□□□□ -0.38
PTCH1-208ENST00000430669 APOBEC3FQ8IUX4 373 aaKnown RBP12.7□□□□□ -0.38
PTCH1-208ENST00000430669 FAM84BQ96KN1 310 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-208ENST00000430669 AGTPBP1Q9UPW5 1226 aa12.7□□□□□ -0.38
PTCH1-208ENST00000430669 PCDHA5Q9Y5H7 936 aa12.7□□□□□ -0.38
PTCH1-208ENST00000430669 GAS8O95995 478 aa12.7□□□□□ -0.38
PTCH1-208ENST00000430669 MMP14P50281 582 aa12.7□□□□□ -0.38
PTCH1-208ENST00000430669 CCNA1P78396 465 aa12.7□□□□□ -0.38
PTCH1-208ENST00000430669 LRRC37A3O60309 1634 aa12.7□□□□□ -0.38
PTCH1-208ENST00000430669 M0QZ92 97 aa12.7□□□□□ -0.38
PTCH1-208ENST00000430669 ALAS1P13196 640 aa12.7□□□□□ -0.38
PTCH1-208ENST00000430669 NR5A1Q13285 461 aa12.7□□□□□ -0.38
PTCH1-208ENST00000430669 ECE2O60344 883 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 FDX1P10109 184 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 CFAP58Q5T655 872 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 FAM102BQ5T8I3 360 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 PIM2Q9P1W9 311 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 OSBPP22059 807 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 TMOD1P28289 359 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 BRD3Q15059 726 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 DIXDC1Q155Q3 683 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 MAN2A1Q16706 1144 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 USP17L2Q6R6M4 530 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 CELF1Q92879 486 aaKnown RBP12.69□□□□□ -0.38
PTCH1-208ENST00000430669 IQCGQ9H095 443 aaKnown RBP12.69□□□□□ -0.38
PTCH1-208ENST00000430669 EFCAB8A8MWE9 144 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 SMARCA1P28370 1054 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 MTMR3Q13615 1198 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 RPS6KA1Q15418 735 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 NSUN4Q96CB9 384 aaKnown RBP12.69□□□□□ -0.38
PTCH1-208ENST00000430669 POLGP54098 1239 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-208ENST00000430669 DPCR1Q3MIW9 517 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 TYW1BQ6NUM6 668 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 PEX26Q7Z412 305 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 ANKRD35Q8N283 1001 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 SPC25Q9HBM1 224 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 PPP2R2CQ9Y2T4 447 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 ADAM9Q13443 819 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 STAMBPO95630 424 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 MAGEA1P43355 309 aa12.69□□□□□ -0.38
PTCH1-208ENST00000430669 ADKP55263 362 aaKnown RBP12.69□□□□□ -0.38
PTCH1-208ENST00000430669 PTPREP23469 700 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 RFX5P48382 616 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-208ENST00000430669 ALS2Q96Q42 1657 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 STK10O94804 968 aaKnown RBP12.68□□□□□ -0.38
PTCH1-208ENST00000430669 PLCG1P19174 1290 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 PSMC2P35998 433 aaKnown RBP12.68□□□□□ -0.38
PTCH1-208ENST00000430669 LIG4P49917 911 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 FAM76AQ8TAV0 307 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 FAM207AQ9NSI2 230 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-208ENST00000430669 ANAPC4Q9UJX5 808 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 AMFRQ9UKV5 643 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 CCDC114Q96M63 670 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 PIGSQ96S52 555 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 PARVGQ9HBI0 331 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.68□□□□□ -0.38
PTCH1-208ENST00000430669 PAK2Q13177 524 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 LINC00116Q8NCU8 138 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 TRIM11Q96F44 468 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 PAGE5Q96GU1 130 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 C1orf112Q9NSG2 853 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 STRIP1Q5VSL9 837 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 ROBO1Q9Y6N7 1651 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 NTSR2O95665 410 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 RHOXF2BP0C7M4 288 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 JAK3P52333 1124 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 BPIFB4P59827 614 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 CIAPIN1Q6FI81 312 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 RHOXF2Q9BQY4 288 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 MXD3Q9BW11 206 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 NRBP2Q9NSY0 501 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 NUP188Q5SRE5 1749 aa12.68□□□□□ -0.38
PTCH1-208ENST00000430669 IREB2P48200 963 aaKnown RBP12.68□□□□□ -0.38
PTCH1-208ENST00000430669 GPSM2P81274 684 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 STYK1Q6J9G0 422 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 SPZ1Q9BXG8 430 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 PNMA3Q9UL41 463 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 PRDX5P30044 214 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 PDE6CP51160 858 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 EXOC3L4Q17RC7 722 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 XKR9Q5GH70 373 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 GADL1Q6ZQY3 521 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 NBPF11Q86T75 865 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 KIAA1524Q8TCG1 905 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 PCDHB6Q9Y5E3 794 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 TFDP1Q14186 410 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 MLXIPQ9HAP2 919 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 CEP95Q96GE4 821 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 SLC39A2Q9NP94 309 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 GABPB2Q8TAK5 448 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms