RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 DUSP13Q9UII6 198 aa8.83□□□□□ -1
PTPRK-211ENST00000429595 COL18A1P39060 1754 aa8.82□□□□□ -1
PTPRK-211ENST00000429595 SLIT3O75094 1523 aa8.82□□□□□ -1
PTPRK-211ENST00000429595 ANKRD33BA6NCL7 494 aa8.82□□□□□ -1
PTPRK-211ENST00000429595 ETV2O00321 342 aaPredicted RBP8.82□□□□□ -1
PTPRK-211ENST00000429595 LRRN2O75325 713 aa8.82□□□□□ -1
PTPRK-211ENST00000429595 CTSHP09668 335 aa8.82□□□□□ -1
PTPRK-211ENST00000429595 ZGLP1P0C6A0 271 aa8.82□□□□□ -1
PTPRK-211ENST00000429595 TMEM253P0C7T8 217 aa8.82□□□□□ -1
PTPRK-211ENST00000429595 KCNA10Q16322 511 aa8.82□□□□□ -1
PTPRK-211ENST00000429595 BNC2Q6ZN30 1099 aaPredicted RBP8.82□□□□□ -1
PTPRK-211ENST00000429595 TSPYL5Q86VY4 417 aaPredicted RBP8.82□□□□□ -1
PTPRK-211ENST00000429595 TRIT1Q9H3H1 467 aaKnown RBP8.82□□□□□ -1
PTPRK-211ENST00000429595 F6X3S4 739 aa8.81□□□□□ -1
PTPRK-211ENST00000429595 EGR3Q06889 387 aa8.81□□□□□ -1
PTPRK-211ENST00000429595 TIGD5Q53EQ6 642 aa8.81□□□□□ -1
PTPRK-211ENST00000429595 EAPPQ56P03 285 aaPredicted RBP8.81□□□□□ -1
PTPRK-211ENST00000429595 NLGN1Q8N2Q7 840 aa8.81□□□□□ -1
PTPRK-211ENST00000429595 NOC4LQ9BVI4 516 aaKnown RBP8.81□□□□□ -1
PTPRK-211ENST00000429595 PCGF6Q9BYE7 350 aa8.81□□□□□ -1
PTPRK-211ENST00000429595 PARP2Q9UGN5 583 aa8.81□□□□□ -1
PTPRK-211ENST00000429595 FAM221AA4D161 298 aa8.8□□□□□ -1
PTPRK-211ENST00000429595 CILPO75339 1184 aa8.8□□□□□ -1
PTPRK-211ENST00000429595 PLCG1P19174 1290 aa8.8□□□□□ -1
PTPRK-211ENST00000429595 GLDCP23378 1020 aa8.8□□□□□ -1
PTPRK-211ENST00000429595 ZEB1P37275 1124 aaPredicted RBP8.8□□□□□ -1
PTPRK-211ENST00000429595 DEFB115Q30KQ5 88 aa8.8□□□□□ -1
PTPRK-211ENST00000429595 TMEM201Q5SNT2 666 aa8.8□□□□□ -1
PTPRK-211ENST00000429595 FAM13CQ8NE31 585 aa8.8□□□□□ -1
PTPRK-211ENST00000429595 GCC1Q96CN9 775 aa8.8□□□□□ -1
PTPRK-211ENST00000429595 GPATCH2Q9NW75 528 aa8.8□□□□□ -1
PTPRK-211ENST00000429595 PCDHA11Q9Y5I1 949 aa8.8□□□□□ -1
PTPRK-211ENST00000429595 RGPD5Q99666 1765 aa8.8□□□□□ -1
PTPRK-211ENST00000429595 LY75O60449 1722 aa8.8□□□□□ -1
PTPRK-211ENST00000429595 ST13P50502 369 aaKnown RBP8.79□□□□□ -1
PTPRK-211ENST00000429595 DAB2P98082 770 aa8.79□□□□□ -1
PTPRK-211ENST00000429595 TAF1CQ15572 869 aaPredicted RBP8.79□□□□□ -1
PTPRK-211ENST00000429595 AMIGO3Q86WK7 504 aa8.79□□□□□ -1
PTPRK-211ENST00000429595 PDZD8Q8NEN9 1154 aa8.79□□□□□ -1
PTPRK-211ENST00000429595 ZCRB1Q8TBF4 217 aaKnown RBP8.79□□□□□ -1
PTPRK-211ENST00000429595 SMARCC1Q92922 1105 aaPredicted RBP8.79□□□□□ -1
PTPRK-211ENST00000429595 SMG5Q9UPR3 1016 aaKnown RBP8.79□□□□□ -1
PTPRK-211ENST00000429595 PKD1L3Q7Z443 1732 aa8.79□□□□□ -1
PTPRK-211ENST00000429595 RLBP1P12271 317 aa8.78□□□□□ -1
PTPRK-211ENST00000429595 TMF1P82094 1093 aa8.78□□□□□ -1
PTPRK-211ENST00000429595 TTLL10Q6ZVT0 673 aa8.78□□□□□ -1
PTPRK-211ENST00000429595 CCDC84Q86UT8 332 aaPredicted RBP8.78□□□□□ -1
PTPRK-211ENST00000429595 RNF141Q8WVD5 230 aa8.78□□□□□ -1
PTPRK-211ENST00000429595 MPHOSPH9Q99550 1183 aa8.78□□□□□ -1
PTPRK-211ENST00000429595 TRAIPQ9BWF2 469 aa8.78□□□□□ -1
PTPRK-211ENST00000429595 MCOLN1Q9GZU1 580 aa8.78□□□□□ -1
PTPRK-211ENST00000429595 EBF1Q9UH73 591 aa8.78□□□□□ -1
PTPRK-211ENST00000429595 N4BP2Q86UW6 1770 aaPredicted RBP8.78□□□□□ -1
PTPRK-211ENST00000429595 USP31Q70CQ4 1352 aa8.77□□□□□ -1.01
PTPRK-211ENST00000429595 PALLDQ8WX93 1383 aa8.77□□□□□ -1.01
PTPRK-211ENST00000429595 TCAF2A6NFQ2 919 aa8.77□□□□□ -1.01
PTPRK-211ENST00000429595 F13A1P00488 732 aa8.77□□□□□ -1.01
PTPRK-211ENST00000429595 LILRA6Q6PI73 481 aa8.77□□□□□ -1.01
PTPRK-211ENST00000429595 SLFN12Q8IYM2 578 aa8.77□□□□□ -1.01
PTPRK-211ENST00000429595 FAM161BQ96MY7 647 aa8.77□□□□□ -1.01
PTPRK-211ENST00000429595 KRTAP4-11Q9BYQ6 195 aa8.77□□□□□ -1.01
PTPRK-211ENST00000429595 KCNH3Q9ULD8 1083 aa8.77□□□□□ -1.01
PTPRK-211ENST00000429595 ADGRB1O14514 1584 aa8.77□□□□□ -1.01
PTPRK-211ENST00000429595 NSD2O96028 1365 aa8.76□□□□□ -1.01
PTPRK-211ENST00000429595 C5P01031 1676 aa8.76□□□□□ -1.01
PTPRK-211ENST00000429595 SHISA3A0PJX4 238 aa8.76□□□□□ -1.01
PTPRK-211ENST00000429595 YARSP54577 528 aaKnown RBP8.76□□□□□ -1.01
PTPRK-211ENST00000429595 LINC00310P59036 64 aa8.76□□□□□ -1.01
PTPRK-211ENST00000429595 LMNB2Q03252 620 aa8.76□□□□□ -1.01
PTPRK-211ENST00000429595 PSMD2Q13200 908 aa8.76□□□□□ -1.01
PTPRK-211ENST00000429595 CAMK2GQ13555 558 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-211ENST00000429595 KCNN1Q92952 543 aa8.76□□□□□ -1.01
PTPRK-211ENST00000429595 LTV1Q96GA3 475 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-211ENST00000429595 ABT1Q9ULW3 272 aaKnown RBP8.76□□□□□ -1.01
PTPRK-211ENST00000429595 POLR3KQ9Y2Y1 108 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-211ENST00000429595 TTC21BQ7Z4L5 1316 aa8.76□□□□□ -1.01
PTPRK-211ENST00000429595 WDR33Q9C0J8 1336 aaKnown RBP8.76□□□□□ -1.01
PTPRK-211ENST00000429595 PCNTO95613 3336 aa8.75□□□□□ -1.01
PTPRK-211ENST00000429595 DNAJA2O60884 412 aa8.75□□□□□ -1.01
PTPRK-211ENST00000429595 PF4P02776 101 aa8.75□□□□□ -1.01
PTPRK-211ENST00000429595 GRM1Q13255 1194 aa8.75□□□□□ -1.01
PTPRK-211ENST00000429595 LILRA2Q8N149 483 aa8.75□□□□□ -1.01
PTPRK-211ENST00000429595 BAHD1Q8TBE0 780 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-211ENST00000429595 GATAD2BQ8WXI9 593 aa8.75□□□□□ -1.01
PTPRK-211ENST00000429595 RHOVQ96L33 236 aa8.75□□□□□ -1.01
PTPRK-211ENST00000429595 KREMEN1Q96MU8 473 aa8.75□□□□□ -1.01
PTPRK-211ENST00000429595 REV1Q9UBZ9 1251 aa8.75□□□□□ -1.01
PTPRK-211ENST00000429595 TTC21AQ8NDW8 1320 aa8.75□□□□□ -1.01
PTPRK-211ENST00000429595 MYOCOSA0A1B0GUC4 107 aa8.74□□□□□ -1.01
PTPRK-211ENST00000429595 CHURC1-FNTBB4DL54 471 aa8.74□□□□□ -1.01
PTPRK-211ENST00000429595 KCNA3P22001 575 aa8.74□□□□□ -1.01
PTPRK-211ENST00000429595 ECE1P42892 770 aa8.74□□□□□ -1.01
PTPRK-211ENST00000429595 TEKQ02763 1124 aa8.74□□□□□ -1.01
PTPRK-211ENST00000429595 NR0B2Q15466 257 aa8.74□□□□□ -1.01
PTPRK-211ENST00000429595 CIAPIN1Q6FI81 312 aa8.74□□□□□ -1.01
PTPRK-211ENST00000429595 IRF2BP1Q8IU81 584 aa8.74□□□□□ -1.01
PTPRK-211ENST00000429595 USP54Q70EL1 1684 aa8.74□□□□□ -1.01
PTPRK-211ENST00000429595 DOT1LQ8TEK3 1739 aa8.74□□□□□ -1.01
PTPRK-211ENST00000429595 RBM47A0AV96 593 aaKnown RBP8.73□□□□□ -1.01
PTPRK-211ENST00000429595 FITM1A5D6W6 292 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms