RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 RMDN3Q96TC7 470 aa21.48■■□□□ 1.03
NUP50-207ENST00000424634 KIAA1217Q5T5P2 1943 aa21.48■■□□□ 1.03
NUP50-207ENST00000424634 B4DLN1 442 aa21.47■■□□□ 1.03
NUP50-207ENST00000424634 TLR3O15455 904 aaKnown RBP21.47■■□□□ 1.03
NUP50-207ENST00000424634 CFBP00751 764 aa21.47■■□□□ 1.03
NUP50-207ENST00000424634 TXNP10599 105 aaKnown RBP21.47■■□□□ 1.03
NUP50-207ENST00000424634 HSD17B4P51659 736 aa21.47■■□□□ 1.03
NUP50-207ENST00000424634 MRPL12P52815 198 aaKnown RBP21.47■■□□□ 1.03
NUP50-207ENST00000424634 PURAQ00577 322 aaKnown RBP21.47■■□□□ 1.03
NUP50-207ENST00000424634 PPP2R5BQ15173 497 aa21.47■■□□□ 1.03
NUP50-207ENST00000424634 CCDC62Q6P9F0 684 aa21.47■■□□□ 1.03
NUP50-207ENST00000424634 C16orf59Q7L2K0 433 aa21.47■■□□□ 1.03
NUP50-207ENST00000424634 PIGSQ96S52 555 aa21.47■■□□□ 1.03
NUP50-207ENST00000424634 TRPV6Q9H1D0 765 aa21.47■■□□□ 1.03
NUP50-207ENST00000424634 PCDHA1Q9Y5I3 950 aa21.47■■□□□ 1.03
NUP50-207ENST00000424634 SLC27A2O14975 620 aa21.46■■□□□ 1.03
NUP50-207ENST00000424634 NKRFO15226 690 aaKnown RBP eCLIP21.46■■□□□ 1.03
NUP50-207ENST00000424634 MYL3P08590 195 aa21.46■■□□□ 1.03
NUP50-207ENST00000424634 CPT1AP50416 773 aa21.46■■□□□ 1.03
NUP50-207ENST00000424634 GHRHRQ02643 423 aa21.46■■□□□ 1.03
NUP50-207ENST00000424634 SART3Q15020 963 aaKnown RBP21.46■■□□□ 1.03
NUP50-207ENST00000424634 NECTIN1Q15223 517 aa21.46■■□□□ 1.03
NUP50-207ENST00000424634 FAM109BQ6ICB4 259 aaPredicted RBP21.46■■□□□ 1.03
NUP50-207ENST00000424634 HOMER1Q86YM7 354 aa21.46■■□□□ 1.03
NUP50-207ENST00000424634 IWS1Q96ST2 819 aa21.46■■□□□ 1.03
NUP50-207ENST00000424634 PPP1R12CQ9BZL4 782 aa21.46■■□□□ 1.03
NUP50-207ENST00000424634 LY9Q9HBG7 655 aa21.46■■□□□ 1.03
NUP50-207ENST00000424634 A6NJR5 290 aa21.45■■□□□ 1.02
NUP50-207ENST00000424634 B4GALT4O60513 344 aa21.45■■□□□ 1.02
NUP50-207ENST00000424634 CSF2RAP15509 400 aa21.45■■□□□ 1.02
NUP50-207ENST00000424634 EIF2AK2P19525 551 aaKnown RBP21.45■■□□□ 1.02
NUP50-207ENST00000424634 CYP2C18P33260 490 aa21.45■■□□□ 1.02
NUP50-207ENST00000424634 TTLL4Q14679 1199 aa21.45■■□□□ 1.02
NUP50-207ENST00000424634 BMP2KLQ5H9B9 411 aa21.45■■□□□ 1.02
NUP50-207ENST00000424634 SEPT14Q6ZU15 432 aa21.45■■□□□ 1.02
NUP50-207ENST00000424634 CATIPQ7Z7H3 387 aa21.45■■□□□ 1.02
NUP50-207ENST00000424634 PXMP2Q9NR77 195 aa21.45■■□□□ 1.02
NUP50-207ENST00000424634 POLR3EQ9NVU0 708 aa21.45■■□□□ 1.02
NUP50-207ENST00000424634 SCN10AQ9Y5Y9 1956 aa21.45■■□□□ 1.02
NUP50-207ENST00000424634 STXBP2Q15833 593 aa21.44■■□□□ 1.02
NUP50-207ENST00000424634 LY6KQ17RY6 165 aa21.44■■□□□ 1.02
NUP50-207ENST00000424634 ARHGEF16Q5VV41 709 aa21.44■■□□□ 1.02
NUP50-207ENST00000424634 CREB3L3Q68CJ9 461 aa21.44■■□□□ 1.02
NUP50-207ENST00000424634 RNPC3Q96LT9 517 aaKnown RBP21.44■■□□□ 1.02
NUP50-207ENST00000424634 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.44■■□□□ 1.027e-6■□□□□ 9.4
NUP50-207ENST00000424634 MYL10Q9BUA6 226 aa21.44■■□□□ 1.02
NUP50-207ENST00000424634 SEZ6LQ9BYH1 1024 aa21.44■■□□□ 1.02
NUP50-207ENST00000424634 UMODL1Q5DID0 1318 aa21.44■■□□□ 1.02
NUP50-207ENST00000424634 PRC1O43663 620 aa21.43■■□□□ 1.02
NUP50-207ENST00000424634 NR3C2P08235 984 aa21.43■■□□□ 1.02
NUP50-207ENST00000424634 HOXA13P31271 388 aaPredicted RBP21.43■■□□□ 1.02
NUP50-207ENST00000424634 SMAD3P84022 425 aaKnown RBP21.43■■□□□ 1.02
NUP50-207ENST00000424634 TMEM240Q5SV17 173 aa21.43■■□□□ 1.02
NUP50-207ENST00000424634 PPP1R13LQ8WUF5 828 aa21.43■■□□□ 1.02
NUP50-207ENST00000424634 FAM161BQ96MY7 647 aa21.43■■□□□ 1.02
NUP50-207ENST00000424634 MTG1Q9BT17 334 aaPredicted RBP21.43■■□□□ 1.02
NUP50-207ENST00000424634 ALDH8A1Q9H2A2 487 aaPredicted RBP21.43■■□□□ 1.02
NUP50-207ENST00000424634 CDH23Q9H251 3354 aa21.42■■□□□ 1.02
NUP50-207ENST00000424634 PNMA6FA0A0J9YX94 578 aa21.42■■□□□ 1.02
NUP50-207ENST00000424634 MYH7BA7E2Y1 1941 aa21.42■■□□□ 1.02
NUP50-207ENST00000424634 EIF3JO75822 258 aaKnown RBP21.42■■□□□ 1.02
NUP50-207ENST00000424634 ACRP10323 421 aa21.42■■□□□ 1.02
NUP50-207ENST00000424634 ARHGAP1Q07960 439 aa21.42■■□□□ 1.02
NUP50-207ENST00000424634 PPIGQ13427 754 aaKnown RBP eCLIP21.42■■□□□ 1.02
NUP50-207ENST00000424634 NBPF20Q3BBV1 942 aa21.42■■□□□ 1.02
NUP50-207ENST00000424634 ZNF654Q8IZM8 581 aa21.42■■□□□ 1.02
NUP50-207ENST00000424634 TMEM199Q8N511 208 aa21.42■■□□□ 1.02
NUP50-207ENST00000424634 GUCD1Q96NT3 240 aa21.42■■□□□ 1.02
NUP50-207ENST00000424634 MTA3Q9BTC8 594 aa21.42■■□□□ 1.02
NUP50-207ENST00000424634 NOC4LQ9BVI4 516 aaKnown RBP21.42■■□□□ 1.02
NUP50-207ENST00000424634 HIPK3Q9H422 1215 aa21.42■■□□□ 1.02
NUP50-207ENST00000424634 ANO2Q9NQ90 1003 aa21.42■■□□□ 1.02
NUP50-207ENST00000424634 TRMT13Q9NUP7 481 aaKnown RBP21.42■■□□□ 1.02
NUP50-207ENST00000424634 MAP3K20Q9NYL2 800 aaKnown RBP21.42■■□□□ 1.02
NUP50-207ENST00000424634 SH2B2O14492 632 aaPredicted RBP21.41■■□□□ 1.02
NUP50-207ENST00000424634 MCM5P33992 734 aa21.41■■□□□ 1.02
NUP50-207ENST00000424634 BRDTQ58F21 947 aaPredicted RBP21.41■■□□□ 1.02
NUP50-207ENST00000424634 CASC1Q6TDU7 716 aa21.41■■□□□ 1.02
NUP50-207ENST00000424634 AFG1LQ8WV93 481 aa21.41■■□□□ 1.02
NUP50-207ENST00000424634 PIBF1Q8WXW3 757 aa21.41■■□□□ 1.02
NUP50-207ENST00000424634 MAP3K14Q99558 947 aa21.41■■□□□ 1.02
NUP50-207ENST00000424634 PDCD2LQ9BRP1 358 aa21.41■■□□□ 1.02
NUP50-207ENST00000424634 DDX41Q9UJV9 622 aaKnown RBP21.41■■□□□ 1.02
NUP50-207ENST00000424634 KPNA6O60684 536 aa21.4■■□□□ 1.02
NUP50-207ENST00000424634 RGS20O76081 388 aa21.4■■□□□ 1.02
NUP50-207ENST00000424634 ZNF365Q70YC5 407 aa21.4■■□□□ 1.02
NUP50-207ENST00000424634 SAMD3Q8N6K7 520 aa21.4■■□□□ 1.02
NUP50-207ENST00000424634 IL31RAQ8NI17 732 aa21.4■■□□□ 1.02
NUP50-207ENST00000424634 WNT8AQ9H1J5 351 aa21.4■■□□□ 1.02
NUP50-207ENST00000424634 SEMA6BQ9H3T3 888 aa21.4■■□□□ 1.02
NUP50-207ENST00000424634 STXBP5LQ9Y2K9 1186 aa21.4■■□□□ 1.02
NUP50-207ENST00000424634 GCOM1H8Y6P7 765 aaPredicted RBP21.39■■□□□ 1.01
NUP50-207ENST00000424634 DDAH1O94760 285 aa21.39■■□□□ 1.01
NUP50-207ENST00000424634 GH1P01241 217 aa21.39■■□□□ 1.01
NUP50-207ENST00000424634 POLR2MP0CAP2 368 aa21.39■■□□□ 1.01
NUP50-207ENST00000424634 CYP2C9P11712 490 aa21.39■■□□□ 1.01
NUP50-207ENST00000424634 MYCLP12524 364 aaPredicted RBP21.39■■□□□ 1.01
NUP50-207ENST00000424634 CCL23P55773 120 aa21.39■■□□□ 1.01
NUP50-207ENST00000424634 ZNF697Q5TEC3 545 aa21.39■■□□□ 1.01
NUP50-207ENST00000424634 RASIP1Q5U651 963 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms