RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 ZNFX1Q9P2E3 1918 aaKnown RBP10.8□□□□□ -0.68
NUP50-206ENST00000422489 TRIOBPQ9H2D6 2365 aa10.8□□□□□ -0.68
NUP50-206ENST00000422489 ZBTB5O15062 677 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 NKRFO15226 690 aaKnown RBP eCLIP10.79□□□□□ -0.68
NUP50-206ENST00000422489 ACRP10323 421 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 MYCLP12524 364 aaPredicted RBP10.79□□□□□ -0.68
NUP50-206ENST00000422489 CSF2RAP15509 400 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 EDNRBP24530 442 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 CYP2C18P33260 490 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 CCL23P55773 120 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 PPIGQ13427 754 aaKnown RBP eCLIP10.79□□□□□ -0.68
NUP50-206ENST00000422489 TTLL4Q14679 1199 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 GRM4Q14833 912 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 STXBP2Q15833 593 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 LY6KQ17RY6 165 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 CASC1Q6TDU7 716 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 NFXL1Q6ZNB6 911 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 SLC43A3Q8NBI5 491 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 SLC17A8Q8NDX2 589 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 IGDCC4Q8TDY8 1250 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 PPP1R13LQ8WUF5 828 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 ESYT1Q9BSJ8 1104 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 MTG1Q9BT17 334 aaPredicted RBP10.79□□□□□ -0.68
NUP50-206ENST00000422489 ANO2Q9NQ90 1003 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 MTMR10Q9NXD2 777 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 COL20A1Q9P218 1284 aa10.79□□□□□ -0.68
NUP50-206ENST00000422489 PRC1O43663 620 aa10.78□□□□□ -0.68
NUP50-206ENST00000422489 PPP1R11O60927 126 aaPredicted RBP10.78□□□□□ -0.68
NUP50-206ENST00000422489 EIF3JO75822 258 aaKnown RBP10.78□□□□□ -0.68
NUP50-206ENST00000422489 ARIH2O95376 493 aa10.78□□□□□ -0.68
NUP50-206ENST00000422489 CD4P01730 458 aa10.78□□□□□ -0.68
NUP50-206ENST00000422489 NR3C2P08235 984 aa10.78□□□□□ -0.68
NUP50-206ENST00000422489 HOXA13P31271 388 aaPredicted RBP10.78□□□□□ -0.68
NUP50-206ENST00000422489 ANTXR2P58335 489 aa10.78□□□□□ -0.68
NUP50-206ENST00000422489 TRAF1Q13077 416 aa10.78□□□□□ -0.68
NUP50-206ENST00000422489 ZNF697Q5TEC3 545 aa10.78□□□□□ -0.68
NUP50-206ENST00000422489 CENPQQ7L2Z9 268 aaPredicted RBP10.78□□□□□ -0.68
NUP50-206ENST00000422489 FCHSD1Q86WN1 690 aa10.78□□□□□ -0.68
NUP50-206ENST00000422489 IWS1Q96ST2 819 aa10.78□□□□□ -0.68
NUP50-206ENST00000422489 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.78□□□□□ -0.687e-6■□□□□ 9.4
NUP50-206ENST00000422489 SEZ6LQ9BYH1 1024 aa10.78□□□□□ -0.68
NUP50-206ENST00000422489 MAF1Q9H063 256 aa10.78□□□□□ -0.68
NUP50-206ENST00000422489 LSG1Q9H089 658 aaKnown RBP10.78□□□□□ -0.68
NUP50-206ENST00000422489 HIPK3Q9H422 1215 aa10.78□□□□□ -0.68
NUP50-206ENST00000422489 FRMPD3Q5JV73 1810 aa10.77□□□□□ -0.68
NUP50-206ENST00000422489 PLXNA1Q9UIW2 1896 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 PNMA6FA0A0J9YX94 578 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.77□□□□□ -0.69
NUP50-206ENST00000422489 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.77□□□□□ -0.69
NUP50-206ENST00000422489 CCDC69A6NI79 296 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 GCOM1H8Y6P7 765 aaPredicted RBP10.77□□□□□ -0.69
NUP50-206ENST00000422489 SLC27A2O14975 620 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 SORBS3O60504 671 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 KPNA6O60684 536 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 GH1P01241 217 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 POLR2MP0CAP2 368 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 MCM5P33992 734 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 PURAQ00577 322 aaKnown RBP10.77□□□□□ -0.69
NUP50-206ENST00000422489 TROAPQ12815 778 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 SLC35G1Q2M3R5 365 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 NBPF20Q3BBV1 942 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 CREB3L3Q68CJ9 461 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 FAM109BQ6ICB4 259 aaPredicted RBP10.77□□□□□ -0.69
NUP50-206ENST00000422489 ZNF365Q70YC5 407 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 C16orf59Q7L2K0 433 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 MB21D2Q8IYB1 491 aaPredicted RBP10.77□□□□□ -0.69
NUP50-206ENST00000422489 CTCFLQ8NI51 663 aaPredicted RBP10.77□□□□□ -0.69
NUP50-206ENST00000422489 MTMR8Q96EF0 704 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 ZFP91Q96JP5 570 aaPredicted RBP10.77□□□□□ -0.69
NUP50-206ENST00000422489 MYL10Q9BUA6 226 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 SEMA6BQ9H3T3 888 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 RIOX1Q9H6W3 641 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 PXMP2Q9NR77 195 aa10.77□□□□□ -0.69
NUP50-206ENST00000422489 TRMT13Q9NUP7 481 aaKnown RBP10.77□□□□□ -0.69
NUP50-206ENST00000422489 SMCHD1A6NHR9 2005 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 A6NJR5 290 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 CYTH3O43739 400 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 B4GALT4O60513 344 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 FGBP02675 491 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 SUPT20HL2P0C7V6 817 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 CYP2C9P11712 490 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 SMAD3P84022 425 aaKnown RBP10.76□□□□□ -0.69
NUP50-206ENST00000422489 TMEM240Q5SV17 173 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 CCDC62Q6P9F0 684 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 RAB11FIP4Q86YS3 637 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 DHX37Q8IY37 1157 aaKnown RBP10.76□□□□□ -0.69
NUP50-206ENST00000422489 ZNF654Q8IZM8 581 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 TMTC2Q8N394 836 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 AFG1LQ8WV93 481 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 ALDH8A1Q9H2A2 487 aaPredicted RBP10.76□□□□□ -0.69
NUP50-206ENST00000422489 IL23AQ9NPF7 189 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 NOD1Q9Y239 953 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 STXBP5LQ9Y2K9 1186 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 MRVI1Q9Y6F6 885 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 UMODL1Q5DID0 1318 aa10.76□□□□□ -0.69
NUP50-206ENST00000422489 GRXCR1A8MXD5 290 aa10.75□□□□□ -0.69
NUP50-206ENST00000422489 OPLAHO14841 1288 aa10.75□□□□□ -0.69
NUP50-206ENST00000422489 RXRAP19793 462 aa10.75□□□□□ -0.69
NUP50-206ENST00000422489 CASTP20810 708 aaKnown RBP10.75□□□□□ -0.69
NUP50-206ENST00000422489 KIF5BP33176 963 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms