RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 PURAQ00577 322 aaKnown RBP29.65■■■□□ 2.34
SMDT1-202ENST00000422252 TROAPQ12815 778 aa29.65■■■□□ 2.34
SMDT1-202ENST00000422252 TTLL4Q14679 1199 aa29.65■■■□□ 2.34
SMDT1-202ENST00000422252 BRDTQ58F21 947 aaPredicted RBP29.65■■■□□ 2.34
SMDT1-202ENST00000422252 IGDCC4Q8TDY8 1250 aa29.65■■■□□ 2.34
SMDT1-202ENST00000422252 ESYT1Q9BSJ8 1104 aa29.65■■■□□ 2.34
SMDT1-202ENST00000422252 PPP1R12CQ9BZL4 782 aa29.65■■■□□ 2.34
SMDT1-202ENST00000422252 LSG1Q9H089 658 aaKnown RBP29.65■■■□□ 2.34
SMDT1-202ENST00000422252 RIOX1Q9H6W3 641 aa29.65■■■□□ 2.34
SMDT1-202ENST00000422252 MYL3P08590 195 aa29.64■■■□□ 2.34
SMDT1-202ENST00000422252 PPIGQ13427 754 aaKnown RBP eCLIP29.64■■■□□ 2.34
SMDT1-202ENST00000422252 SLC35G1Q2M3R5 365 aa29.64■■■□□ 2.34
SMDT1-202ENST00000422252 CATIPQ7Z7H3 387 aa29.64■■■□□ 2.34
SMDT1-202ENST00000422252 TMEM199Q8N511 208 aa29.64■■■□□ 2.34
SMDT1-202ENST00000422252 COPS5Q92905 334 aa29.64■■■□□ 2.34
SMDT1-202ENST00000422252 GPHNQ9NQX3 736 aaPredicted RBP29.64■■■□□ 2.34
SMDT1-202ENST00000422252 PCDHA1Q9Y5I3 950 aa29.64■■■□□ 2.34
SMDT1-202ENST00000422252 OPLAHO14841 1288 aa29.63■■■□□ 2.33
SMDT1-202ENST00000422252 ARIH2O95376 493 aa29.63■■■□□ 2.33
SMDT1-202ENST00000422252 HSD17B4P51659 736 aa29.63■■■□□ 2.33
SMDT1-202ENST00000422252 SMAD3P84022 425 aaKnown RBP29.63■■■□□ 2.33
SMDT1-202ENST00000422252 GHRHRQ02643 423 aa29.63■■■□□ 2.33
SMDT1-202ENST00000422252 STXBP2Q15833 593 aa29.63■■■□□ 2.33
SMDT1-202ENST00000422252 ARHGEF16Q5VV41 709 aa29.63■■■□□ 2.33
SMDT1-202ENST00000422252 HOMER1Q86YM7 354 aa29.63■■■□□ 2.33
SMDT1-202ENST00000422252 PIGSQ96S52 555 aa29.63■■■□□ 2.33
SMDT1-202ENST00000422252 B4GALT4O60513 344 aa29.62■■■□□ 2.33
SMDT1-202ENST00000422252 TRAF1Q13077 416 aa29.62■■■□□ 2.33
SMDT1-202ENST00000422252 SEPT14Q6ZU15 432 aa29.62■■■□□ 2.33
SMDT1-202ENST00000422252 MTG1Q9BT17 334 aaPredicted RBP29.62■■■□□ 2.33
SMDT1-202ENST00000422252 TRPV6Q9H1D0 765 aa29.62■■■□□ 2.33
SMDT1-202ENST00000422252 MAP3K20Q9NYL2 800 aaKnown RBP29.62■■■□□ 2.33
SMDT1-202ENST00000422252 A6NJR5 290 aa29.61■■■□□ 2.33
SMDT1-202ENST00000422252 EIF2AK2P19525 551 aaKnown RBP29.61■■■□□ 2.33
SMDT1-202ENST00000422252 BMP2KLQ5H9B9 411 aa29.61■■■□□ 2.33
SMDT1-202ENST00000422252 ZNF697Q5TEC3 545 aa29.61■■■□□ 2.33
SMDT1-202ENST00000422252 CCDC62Q6P9F0 684 aa29.61■■■□□ 2.33
SMDT1-202ENST00000422252 MTA3Q9BTC8 594 aa29.61■■■□□ 2.33
SMDT1-202ENST00000422252 HIPK3Q9H422 1215 aa29.61■■■□□ 2.33
SMDT1-202ENST00000422252 PXMP2Q9NR77 195 aa29.61■■■□□ 2.33
SMDT1-202ENST00000422252 CYTH3O43739 400 aa29.6■■■□□ 2.33
SMDT1-202ENST00000422252 KPNA6O60684 536 aa29.6■■■□□ 2.33
SMDT1-202ENST00000422252 CSF2RAP15509 400 aa29.6■■■□□ 2.33
SMDT1-202ENST00000422252 CYP2C18P33260 490 aa29.6■■■□□ 2.33
SMDT1-202ENST00000422252 CASC1Q6TDU7 716 aa29.6■■■□□ 2.33
SMDT1-202ENST00000422252 SAMD3Q8N6K7 520 aa29.6■■■□□ 2.33
SMDT1-202ENST00000422252 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.6■■■□□ 2.33
SMDT1-202ENST00000422252 ALDH8A1Q9H2A2 487 aaPredicted RBP29.6■■■□□ 2.33
SMDT1-202ENST00000422252 LY9Q9HBG7 655 aa29.6■■■□□ 2.33
SMDT1-202ENST00000422252 STXBP5LQ9Y2K9 1186 aa29.6■■■□□ 2.33
SMDT1-202ENST00000422252 PNMA6FA0A0J9YX94 578 aa29.59■■■□□ 2.33
SMDT1-202ENST00000422252 SLC27A2O14975 620 aa29.59■■■□□ 2.33
SMDT1-202ENST00000422252 NR3C2P08235 984 aa29.59■■■□□ 2.33
SMDT1-202ENST00000422252 C16orf59Q7L2K0 433 aa29.59■■■□□ 2.33
SMDT1-202ENST00000422252 SKAP1Q86WV1 359 aa29.59■■■□□ 2.33
SMDT1-202ENST00000422252 ANO2Q9NQ90 1003 aa29.59■■■□□ 2.33
SMDT1-202ENST00000422252 PRC1O43663 620 aa29.58■■■□□ 2.33
SMDT1-202ENST00000422252 EIF3JO75822 258 aaKnown RBP29.58■■■□□ 2.33
SMDT1-202ENST00000422252 MCM5P33992 734 aa29.58■■■□□ 2.33
SMDT1-202ENST00000422252 LY6KQ17RY6 165 aa29.58■■■□□ 2.33
SMDT1-202ENST00000422252 ZNF654Q8IZM8 581 aa29.58■■■□□ 2.33
SMDT1-202ENST00000422252 FAM161BQ96MY7 647 aa29.58■■■□□ 2.33
SMDT1-202ENST00000422252 MAP3K14Q99558 947 aa29.58■■■□□ 2.33
SMDT1-202ENST00000422252 NOC4LQ9BVI4 516 aaKnown RBP29.58■■■□□ 2.33
SMDT1-202ENST00000422252 DDAH1O94760 285 aa29.57■■■□□ 2.32
SMDT1-202ENST00000422252 GH1P01241 217 aa29.57■■■□□ 2.32
SMDT1-202ENST00000422252 HOXA13P31271 388 aaPredicted RBP29.57■■■□□ 2.32
SMDT1-202ENST00000422252 NECTIN1Q15223 517 aa29.57■■■□□ 2.32
SMDT1-202ENST00000422252 TMEM240Q5SV17 173 aa29.57■■■□□ 2.32
SMDT1-202ENST00000422252 CREB3L3Q68CJ9 461 aa29.57■■■□□ 2.32
SMDT1-202ENST00000422252 GUCD1Q96NT3 240 aa29.57■■■□□ 2.32
SMDT1-202ENST00000422252 COL6A3P12111 3177 aa29.57■■■□□ 2.32
SMDT1-202ENST00000422252 UMODL1Q5DID0 1318 aa29.56■■■□□ 2.32
SMDT1-202ENST00000422252 NBPF20Q3BBV1 942 aa29.56■■■□□ 2.32
SMDT1-202ENST00000422252 PSRC1Q6PGN9 363 aaPredicted RBP29.56■■■□□ 2.32
SMDT1-202ENST00000422252 CTCFLQ8NI51 663 aaPredicted RBP29.56■■■□□ 2.32
SMDT1-202ENST00000422252 TMEM87BQ96K49 555 aa29.56■■■□□ 2.32
SMDT1-202ENST00000422252 PDCD2LQ9BRP1 358 aa29.56■■■□□ 2.32
SMDT1-202ENST00000422252 IL23AQ9NPF7 189 aa29.56■■■□□ 2.32
SMDT1-202ENST00000422252 TRMT13Q9NUP7 481 aaKnown RBP29.56■■■□□ 2.32
SMDT1-202ENST00000422252 GCOM1H8Y6P7 765 aaPredicted RBP29.55■■■□□ 2.32
SMDT1-202ENST00000422252 SUPT20HL2P0C7V6 817 aa29.55■■■□□ 2.32
SMDT1-202ENST00000422252 POLR2MP0CAP2 368 aa29.55■■■□□ 2.32
SMDT1-202ENST00000422252 ACRP10323 421 aa29.55■■■□□ 2.32
SMDT1-202ENST00000422252 KIF5BP33176 963 aa29.55■■■□□ 2.32
SMDT1-202ENST00000422252 ARHGAP1Q07960 439 aa29.55■■■□□ 2.32
SMDT1-202ENST00000422252 TMTC2Q8N394 836 aa29.55■■■□□ 2.32
SMDT1-202ENST00000422252 AFG1LQ8WV93 481 aa29.55■■■□□ 2.32
SMDT1-202ENST00000422252 MYL10Q9BUA6 226 aa29.55■■■□□ 2.32
SMDT1-202ENST00000422252 DDX41Q9UJV9 622 aaKnown RBP29.55■■■□□ 2.32
SMDT1-202ENST00000422252 SCN10AQ9Y5Y9 1956 aa29.55■■■□□ 2.32
SMDT1-202ENST00000422252 KIAA1217Q5T5P2 1943 aa29.55■■■□□ 2.32
SMDT1-202ENST00000422252 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.54■■■□□ 2.32
SMDT1-202ENST00000422252 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.54■■■□□ 2.32
SMDT1-202ENST00000422252 SH2B2O14492 632 aaPredicted RBP29.54■■■□□ 2.32
SMDT1-202ENST00000422252 FAM47CQ5HY64 1035 aa29.54■■■□□ 2.32
SMDT1-202ENST00000422252 NFRKBQ6P4R8 1299 aa29.54■■■□□ 2.32
SMDT1-202ENST00000422252 NFXL1Q6ZNB6 911 aa29.54■■■□□ 2.32
SMDT1-202ENST00000422252 ZNF365Q70YC5 407 aa29.54■■■□□ 2.32
SMDT1-202ENST00000422252 SEMA6BQ9H3T3 888 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms