RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 CCDC62Q6P9F0 684 aa12.87□□□□□ -0.35
SSBP3-206ENST00000420121 C16orf59Q7L2K0 433 aa12.87□□□□□ -0.35
SSBP3-206ENST00000420121 NCOA7Q8NI08 942 aa12.87□□□□□ -0.35
SSBP3-206ENST00000420121 IGDCC4Q8TDY8 1250 aa12.87□□□□□ -0.35
SSBP3-206ENST00000420121 COPS5Q92905 334 aa12.87□□□□□ -0.35
SSBP3-206ENST00000420121 VTI1AQ96AJ9 217 aa12.87□□□□□ -0.35
SSBP3-206ENST00000420121 RIOX1Q9H6W3 641 aa12.87□□□□□ -0.35
SSBP3-206ENST00000420121 TANC1Q9C0D5 1861 aa12.87□□□□□ -0.35
SSBP3-206ENST00000420121 UMODL1Q5DID0 1318 aa12.87□□□□□ -0.35
SSBP3-206ENST00000420121 CHD9Q3L8U1 2897 aa12.86□□□□□ -0.35
SSBP3-206ENST00000420121 IFIT3O14879 490 aaKnown RBP12.86□□□□□ -0.35
SSBP3-206ENST00000420121 ZBTB5O15062 677 aa12.86□□□□□ -0.35
SSBP3-206ENST00000420121 HSD17B4P51659 736 aa12.86□□□□□ -0.35
SSBP3-206ENST00000420121 PURAQ00577 322 aaKnown RBP12.86□□□□□ -0.35
SSBP3-206ENST00000420121 MFSD5Q6N075 450 aa12.86□□□□□ -0.35
SSBP3-206ENST00000420121 ESYT1Q9BSJ8 1104 aa12.86□□□□□ -0.35
SSBP3-206ENST00000420121 GPHNQ9NQX3 736 aaPredicted RBP12.86□□□□□ -0.35
SSBP3-206ENST00000420121 MRPL11Q9Y3B7 192 aaKnown RBP12.86□□□□□ -0.35
SSBP3-206ENST00000420121 DOCK5Q9H7D0 1870 aa12.86□□□□□ -0.35
SSBP3-206ENST00000420121 EYSQ5T1H1 3165 aa12.85□□□□□ -0.35
SSBP3-206ENST00000420121 A6NJR5 290 aa12.85□□□□□ -0.35
SSBP3-206ENST00000420121 NKRFO15226 690 aaKnown RBP eCLIP12.85□□□□□ -0.35
SSBP3-206ENST00000420121 DHX16O60231 1041 aaKnown RBP12.85□□□□□ -0.35
SSBP3-206ENST00000420121 B4GALT4O60513 344 aa12.85□□□□□ -0.35
SSBP3-206ENST00000420121 WTAPQ15007 396 aa12.85□□□□□ -0.35
SSBP3-206ENST00000420121 PPP2R5BQ15173 497 aa12.85□□□□□ -0.35
SSBP3-206ENST00000420121 RALYLQ86SE5 291 aaKnown RBP12.85□□□□□ -0.35
SSBP3-206ENST00000420121 OR6J1Q8NGC5 347 aa12.85□□□□□ -0.35
SSBP3-206ENST00000420121 SCFD2Q8WU76 684 aa12.85□□□□□ -0.35
SSBP3-206ENST00000420121 VWCEQ96DN2 955 aa12.85□□□□□ -0.35
SSBP3-206ENST00000420121 GUCD1Q96NT3 240 aa12.85□□□□□ -0.35
SSBP3-206ENST00000420121 PIGSQ96S52 555 aa12.85□□□□□ -0.35
SSBP3-206ENST00000420121 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.85□□□□□ -0.352e-7■□□□□ 10
SSBP3-206ENST00000420121 AMNQ9BXJ7 453 aa12.85□□□□□ -0.35
SSBP3-206ENST00000420121 PPP1R12CQ9BZL4 782 aa12.85□□□□□ -0.35
SSBP3-206ENST00000420121 TRPV6Q9H1D0 765 aa12.85□□□□□ -0.35
SSBP3-206ENST00000420121 LY9Q9HBG7 655 aa12.85□□□□□ -0.35
SSBP3-206ENST00000420121 TRIP12Q14669 1992 aaPredicted RBP12.85□□□□□ -0.35
SSBP3-206ENST00000420121 SLC27A2O14975 620 aa12.84□□□□□ -0.35
SSBP3-206ENST00000420121 TLR3O15455 904 aaKnown RBP12.84□□□□□ -0.35
SSBP3-206ENST00000420121 ZEB2O60315 1214 aa12.84□□□□□ -0.35
SSBP3-206ENST00000420121 TXNP10599 105 aaKnown RBP12.84□□□□□ -0.35
SSBP3-206ENST00000420121 CSF2RAP15509 400 aa12.84□□□□□ -0.35
SSBP3-206ENST00000420121 CYP2C18P33260 490 aa12.84□□□□□ -0.35
SSBP3-206ENST00000420121 SMAD3P84022 425 aaKnown RBP12.84□□□□□ -0.35
SSBP3-206ENST00000420121 NECTIN1Q15223 517 aa12.84□□□□□ -0.35
SSBP3-206ENST00000420121 BMP2KLQ5H9B9 411 aa12.84□□□□□ -0.35
SSBP3-206ENST00000420121 TMEM67Q5HYA8 995 aa12.84□□□□□ -0.35
SSBP3-206ENST00000420121 TMEM240Q5SV17 173 aa12.84□□□□□ -0.35
SSBP3-206ENST00000420121 RASIP1Q5U651 963 aa12.84□□□□□ -0.35
SSBP3-206ENST00000420121 MCF2L2Q86YR7 1114 aa12.84□□□□□ -0.35
SSBP3-206ENST00000420121 NSUN6Q8TEA1 469 aaKnown RBP12.84□□□□□ -0.35
SSBP3-206ENST00000420121 IWS1Q96ST2 819 aa12.84□□□□□ -0.35
SSBP3-206ENST00000420121 RMDN3Q96TC7 470 aa12.84□□□□□ -0.35
SSBP3-206ENST00000420121 NOC4LQ9BVI4 516 aaKnown RBP12.84□□□□□ -0.35
SSBP3-206ENST00000420121 WNT8AQ9H1J5 351 aa12.84□□□□□ -0.35
SSBP3-206ENST00000420121 ALDH8A1Q9H2A2 487 aaPredicted RBP12.84□□□□□ -0.35
SSBP3-206ENST00000420121 PXMP2Q9NR77 195 aa12.84□□□□□ -0.35
SSBP3-206ENST00000420121 POLR3EQ9NVU0 708 aa12.84□□□□□ -0.35
SSBP3-206ENST00000420121 TET1Q8NFU7 2136 aa12.83□□□□□ -0.35
SSBP3-206ENST00000420121 RGS20O76081 388 aa12.83□□□□□ -0.36
SSBP3-206ENST00000420121 CFBP00751 764 aa12.83□□□□□ -0.36
SSBP3-206ENST00000420121 MYL3P08590 195 aa12.83□□□□□ -0.36
SSBP3-206ENST00000420121 EIF2AK2P19525 551 aaKnown RBP12.83□□□□□ -0.36
SSBP3-206ENST00000420121 CPT1AP50416 773 aa12.83□□□□□ -0.36
SSBP3-206ENST00000420121 ARHGAP1Q07960 439 aa12.83□□□□□ -0.36
SSBP3-206ENST00000420121 TTLL4Q14679 1199 aa12.83□□□□□ -0.36
SSBP3-206ENST00000420121 CENPQQ7L2Z9 268 aaPredicted RBP12.83□□□□□ -0.36
SSBP3-206ENST00000420121 HOMER1Q86YM7 354 aa12.83□□□□□ -0.36
SSBP3-206ENST00000420121 IL31RAQ8NI17 732 aa12.83□□□□□ -0.36
SSBP3-206ENST00000420121 PPP1R13LQ8WUF5 828 aa12.83□□□□□ -0.36
SSBP3-206ENST00000420121 RNPC3Q96LT9 517 aaKnown RBP12.83□□□□□ -0.36
SSBP3-206ENST00000420121 MPHOSPH6Q99547 160 aaKnown RBP12.83□□□□□ -0.36
SSBP3-206ENST00000420121 MTG1Q9BT17 334 aaPredicted RBP12.83□□□□□ -0.36
SSBP3-206ENST00000420121 SEZ6LQ9BYH1 1024 aa12.83□□□□□ -0.36
SSBP3-206ENST00000420121 TTYH1Q9H313 450 aaPredicted RBP12.83□□□□□ -0.36
SSBP3-206ENST00000420121 STXBP5LQ9Y2K9 1186 aa12.83□□□□□ -0.36
SSBP3-206ENST00000420121 PCDHA1Q9Y5I3 950 aa12.83□□□□□ -0.36
SSBP3-206ENST00000420121 PTPRSQ13332 1948 aa12.82□□□□□ -0.36
SSBP3-206ENST00000420121 UNC80Q8N2C7 3258 aa12.82□□□□□ -0.36
SSBP3-206ENST00000420121 ERICH2A1L162 156 aa12.82□□□□□ -0.36
SSBP3-206ENST00000420121 B4DLN1 442 aa12.82□□□□□ -0.36
SSBP3-206ENST00000420121 SH2B2O14492 632 aaPredicted RBP12.82□□□□□ -0.36
SSBP3-206ENST00000420121 NR3C2P08235 984 aa12.82□□□□□ -0.36
SSBP3-206ENST00000420121 ACRP10323 421 aa12.82□□□□□ -0.36
SSBP3-206ENST00000420121 HOXA13P31271 388 aaPredicted RBP12.82□□□□□ -0.36
SSBP3-206ENST00000420121 MRPL12P52815 198 aaKnown RBP12.82□□□□□ -0.36
SSBP3-206ENST00000420121 PPIGQ13427 754 aaKnown RBP eCLIP12.82□□□□□ -0.36
SSBP3-206ENST00000420121 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
SSBP3-206ENST00000420121 STXBP2Q15833 593 aa12.82□□□□□ -0.36
SSBP3-206ENST00000420121 LY6KQ17RY6 165 aa12.82□□□□□ -0.36
SSBP3-206ENST00000420121 CREB3L3Q68CJ9 461 aa12.82□□□□□ -0.36
SSBP3-206ENST00000420121 SEPT14Q6ZU15 432 aa12.82□□□□□ -0.36
SSBP3-206ENST00000420121 ZNF654Q8IZM8 581 aa12.82□□□□□ -0.36
SSBP3-206ENST00000420121 FAM161BQ96MY7 647 aa12.82□□□□□ -0.36
SSBP3-206ENST00000420121 MAP3K14Q99558 947 aa12.82□□□□□ -0.36
SSBP3-206ENST00000420121 PDCD2LQ9BRP1 358 aa12.82□□□□□ -0.36
SSBP3-206ENST00000420121 MTA3Q9BTC8 594 aa12.82□□□□□ -0.36
SSBP3-206ENST00000420121 MYL10Q9BUA6 226 aa12.82□□□□□ -0.36
SSBP3-206ENST00000420121 HIPK3Q9H422 1215 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms