RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 REXO1L1PQ8IX06 675 aa17.24■□□□□ 0.35
LRCH3-202ENST00000414675 AMNQ9BXJ7 453 aa17.24■□□□□ 0.35
LRCH3-202ENST00000414675 HDAC9Q9UKV0 1011 aa17.24■□□□□ 0.35
LRCH3-202ENST00000414675 H7C1D1 291 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 N4BP3O15049 544 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 GCFC2P16383 781 aaKnown RBP17.23■□□□□ 0.35
LRCH3-202ENST00000414675 TMEM119Q4V9L6 283 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 OGFOD1Q8N543 542 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 CPLX3Q8WVH0 158 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 DUSP9Q99956 384 aaKnown RBP17.23■□□□□ 0.35
LRCH3-202ENST00000414675 TMEM39BQ9GZU3 492 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 VEZTQ9HBM0 779 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 EXOC1Q9NV70 894 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 STK17AQ9UEE5 414 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 AKR1B15C9JRZ8 316 aaPredicted RBP17.23■□□□□ 0.35
LRCH3-202ENST00000414675 OPLAHO14841 1288 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 CTIFO43310 598 aaKnown RBP17.23■□□□□ 0.35
LRCH3-202ENST00000414675 BTNL9Q6UXG8 535 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 SV2BQ7L1I2 683 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 FBXO11Q86XK2 927 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 ZNF710Q8N1W2 664 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 KIAA0895Q8NCT3 520 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 CRYGNQ8WXF5 182 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 LARP4BQ92615 738 aaKnown RBP17.23■□□□□ 0.35
LRCH3-202ENST00000414675 RAD54LQ92698 747 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 CDK5RAP3Q96JB5 506 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 RAB34Q9BZG1 259 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 ZNRF3Q9ULT6 936 aa17.23■□□□□ 0.35
LRCH3-202ENST00000414675 SHTN1A0MZ66 631 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 PSMA7O14818 248 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 STX10O60499 249 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 GYPCP04921 128 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 SPAG1Q07617 926 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 SEMA3FQ13275 785 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 KRT79Q5XKE5 535 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 TOGARAM2Q6ZUX3 1019 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 SRRTQ9BXP5 876 aaKnown RBP17.22■□□□□ 0.35
LRCH3-202ENST00000414675 GLT8D2Q9H1C3 349 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 PRR12Q9ULL5 1215 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 FXR1P51114 621 aaKnown RBP eCLIP17.22■□□□□ 0.35
LRCH3-202ENST00000414675 AMPD3Q01432 767 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 CXCL9Q07325 125 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 STIM1Q13586 685 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 MTF1Q14872 753 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 DYMQ7RTS9 669 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 NIM1KQ8IY84 436 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 EEF2KMTQ96G04 330 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 TRIM47Q96LD4 638 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 MBOAT7Q96N66 472 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 ARID3AQ99856 593 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 ZBTB21Q9ULJ3 1066 aa17.22■□□□□ 0.35
LRCH3-202ENST00000414675 RNF225M0QZC1 329 aaPredicted RBP17.21■□□□□ 0.35
LRCH3-202ENST00000414675 CASP14P31944 242 aa17.21■□□□□ 0.35
LRCH3-202ENST00000414675 SYT10Q6XYQ8 523 aa17.21■□□□□ 0.35
LRCH3-202ENST00000414675 MIGA2Q7L4E1 593 aa17.21■□□□□ 0.35
LRCH3-202ENST00000414675 PPFIBP1Q86W92 1011 aa17.21■□□□□ 0.35
LRCH3-202ENST00000414675 FCHSD1Q86WN1 690 aa17.21■□□□□ 0.35
LRCH3-202ENST00000414675 SLC16A10Q8TF71 515 aa17.21■□□□□ 0.35
LRCH3-202ENST00000414675 DHTKD1Q96HY7 919 aaPredicted RBP17.21■□□□□ 0.35
LRCH3-202ENST00000414675 PANX2Q96RD6 677 aa17.21■□□□□ 0.35
LRCH3-202ENST00000414675 KCNMB3Q9NPA1 279 aa17.21■□□□□ 0.35
LRCH3-202ENST00000414675 PCDHA12Q9UN75 941 aa17.21■□□□□ 0.35
LRCH3-202ENST00000414675 PPP2R2CQ9Y2T4 447 aa17.21■□□□□ 0.35
LRCH3-202ENST00000414675 ITIH6Q6UXX5 1313 aa17.21■□□□□ 0.35
LRCH3-202ENST00000414675 CYP3A7-CYP3A51PA0A087WV96 503 aa17.21■□□□□ 0.34
LRCH3-202ENST00000414675 MARCH6O60337 910 aa17.21■□□□□ 0.34
LRCH3-202ENST00000414675 MFAP3LO75121 409 aa17.21■□□□□ 0.34
LRCH3-202ENST00000414675 CYP3A7P24462 503 aa17.21■□□□□ 0.34
LRCH3-202ENST00000414675 USP11P51784 963 aa17.21■□□□□ 0.34
LRCH3-202ENST00000414675 ANKRD40Q6AI12 368 aa17.21■□□□□ 0.34
LRCH3-202ENST00000414675 P2RX5Q93086 422 aa17.21■□□□□ 0.34
LRCH3-202ENST00000414675 THAP9Q9H5L6 903 aa17.21■□□□□ 0.34
LRCH3-202ENST00000414675 SLC39A2Q9NP94 309 aa17.21■□□□□ 0.34
LRCH3-202ENST00000414675 SCAF8Q9UPN6 1271 aaKnown RBP17.21■□□□□ 0.34
LRCH3-202ENST00000414675 TMX2Q9Y320 296 aa17.21■□□□□ 0.34
LRCH3-202ENST00000414675 KIF2AO00139 706 aaPredicted RBP17.2■□□□□ 0.34
LRCH3-202ENST00000414675 FANCGO15287 622 aa17.2■□□□□ 0.34
LRCH3-202ENST00000414675 ZBTB7AO95365 584 aa17.2■□□□□ 0.34
LRCH3-202ENST00000414675 CCNE1P24864 410 aa17.2■□□□□ 0.34
LRCH3-202ENST00000414675 MMP14P50281 582 aa17.2■□□□□ 0.34
LRCH3-202ENST00000414675 ARHGAP4P98171 946 aa17.2■□□□□ 0.34
LRCH3-202ENST00000414675 AP3B2Q13367 1082 aa17.2■□□□□ 0.34
LRCH3-202ENST00000414675 NBPF9Q3BBW0 867 aa17.2■□□□□ 0.34
LRCH3-202ENST00000414675 FAM83BQ5T0W9 1011 aa17.2■□□□□ 0.34
LRCH3-202ENST00000414675 TRIM65Q6PJ69 517 aa17.2■□□□□ 0.34
LRCH3-202ENST00000414675 KIF18AQ8NI77 898 aa17.2■□□□□ 0.34
LRCH3-202ENST00000414675 CCDC47Q96A33 483 aaKnown RBP17.2■□□□□ 0.34
LRCH3-202ENST00000414675 DESI2Q9BSY9 194 aa17.2■□□□□ 0.34
LRCH3-202ENST00000414675 PGAP2Q9UHJ9 254 aa17.2■□□□□ 0.34
LRCH3-202ENST00000414675 SOWAHDA6NJG2 315 aa17.19■□□□□ 0.34
LRCH3-202ENST00000414675 HOXA13P31271 388 aaPredicted RBP17.19■□□□□ 0.34
LRCH3-202ENST00000414675 STAT3P40763 770 aa17.19■□□□□ 0.34
LRCH3-202ENST00000414675 UNC13DQ70J99 1090 aa17.19■□□□□ 0.34
LRCH3-202ENST00000414675 MTMR14Q8NCE2 650 aa17.19■□□□□ 0.34
LRCH3-202ENST00000414675 AGBL3Q8NEM8 1001 aa17.19■□□□□ 0.34
LRCH3-202ENST00000414675 ZBED3Q96IU2 234 aaPredicted RBP17.19■□□□□ 0.34
LRCH3-202ENST00000414675 ARHGEF10LQ9HCE6 1279 aa17.19■□□□□ 0.34
LRCH3-202ENST00000414675 NAA30Q147X3 362 aaPredicted RBP17.19■□□□□ 0.34
LRCH3-202ENST00000414675 RAD9BQ6WBX8 426 aa17.19■□□□□ 0.34
LRCH3-202ENST00000414675 CCDC84Q86UT8 332 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms