RNA–Protein interactions for RNA: ENST00000409704.6

ITM2C-204, Transcript of integral membrane protein 2C, humanhuman

TSL 5 BASIC

Gene ITM2C, Length 1,106 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-204ENST00000409704 CTCFLQ8NI51 663 aaPredicted RBP20.8■□□□□ 0.92
ITM2C-204ENST00000409704 NSUN6Q8TEA1 469 aaKnown RBP20.8■□□□□ 0.92
ITM2C-204ENST00000409704 BADQ92934 168 aa20.8■□□□□ 0.92
ITM2C-204ENST00000409704 LRCH3Q96II8 777 aa20.8■□□□□ 0.92
ITM2C-204ENST00000409704 SPZ1Q9BXG8 430 aa20.8■□□□□ 0.92
ITM2C-204ENST00000409704 CCDC69A6NI79 296 aa20.79■□□□□ 0.92
ITM2C-204ENST00000409704 DCDC2CA8MYV0 355 aa20.79■□□□□ 0.92
ITM2C-204ENST00000409704 ARVCFO00192 962 aa20.79■□□□□ 0.92
ITM2C-204ENST00000409704 NKRFO15226 690 aaKnown RBP eCLIP20.79■□□□□ 0.92
ITM2C-204ENST00000409704 ZEB2O60315 1214 aa20.79■□□□□ 0.92
ITM2C-204ENST00000409704 CABYRO75952 493 aa20.79■□□□□ 0.92
ITM2C-204ENST00000409704 KIF5BP33176 963 aa20.79■□□□□ 0.92
ITM2C-204ENST00000409704 LIFRP42702 1097 aa20.79■□□□□ 0.92
ITM2C-204ENST00000409704 TRAF1Q13077 416 aa20.79■□□□□ 0.92
ITM2C-204ENST00000409704 NFXL1Q6ZNB6 911 aa20.79■□□□□ 0.92
ITM2C-204ENST00000409704 VTI1AQ96AJ9 217 aa20.79■□□□□ 0.92
ITM2C-204ENST00000409704 RMDN3Q96TC7 470 aa20.79■□□□□ 0.92
ITM2C-204ENST00000409704 PXMP2Q9NR77 195 aa20.79■□□□□ 0.92
ITM2C-204ENST00000409704 SCN10AQ9Y5Y9 1956 aa20.78■□□□□ 0.92
ITM2C-204ENST00000409704 PNMA6FA0A0J9YX94 578 aa20.78■□□□□ 0.92
ITM2C-204ENST00000409704 ARIH2O95376 493 aa20.78■□□□□ 0.92
ITM2C-204ENST00000409704 EIF2AK2P19525 551 aaKnown RBP20.78■□□□□ 0.92
ITM2C-204ENST00000409704 ITGB8P26012 769 aa20.78■□□□□ 0.92
ITM2C-204ENST00000409704 FAM126BQ8IXS8 530 aa20.78■□□□□ 0.92
ITM2C-204ENST00000409704 IWS1Q96ST2 819 aa20.78■□□□□ 0.92
ITM2C-204ENST00000409704 LRRC2Q9BYS8 371 aa20.78■□□□□ 0.92
ITM2C-204ENST00000409704 TMEM39AQ9NV64 488 aa20.78■□□□□ 0.92
ITM2C-204ENST00000409704 TBX21Q9UL17 535 aa20.78■□□□□ 0.92
ITM2C-204ENST00000409704 CPT1AP50416 773 aa20.77■□□□□ 0.92
ITM2C-204ENST00000409704 TTLL4Q14679 1199 aa20.77■□□□□ 0.92
ITM2C-204ENST00000409704 ARHGEF16Q5VV41 709 aa20.77■□□□□ 0.92
ITM2C-204ENST00000409704 TMTC2Q8N394 836 aa20.77■□□□□ 0.92
ITM2C-204ENST00000409704 SAMD3Q8N6K7 520 aa20.77■□□□□ 0.92
ITM2C-204ENST00000409704 SLC43A3Q8NBI5 491 aa20.77■□□□□ 0.92
ITM2C-204ENST00000409704 COPS5Q92905 334 aa20.77■□□□□ 0.92
ITM2C-204ENST00000409704 MAP3K20Q9NYL2 800 aaKnown RBP20.77■□□□□ 0.92
ITM2C-204ENST00000409704 PLEKHA8P1O95397 391 aa20.76■□□□□ 0.91
ITM2C-204ENST00000409704 CALM1P0DP23 149 aa20.76■□□□□ 0.91
ITM2C-204ENST00000409704 CALM2P0DP24 149 aa20.76■□□□□ 0.91
ITM2C-204ENST00000409704 CALM3P0DP25 149 aa20.76■□□□□ 0.91
ITM2C-204ENST00000409704 TXNP10599 105 aaKnown RBP20.76■□□□□ 0.91
ITM2C-204ENST00000409704 RAG1P15918 1043 aa20.76■□□□□ 0.91
ITM2C-204ENST00000409704 RXRAP19793 462 aa20.76■□□□□ 0.91
ITM2C-204ENST00000409704 HOXA13P31271 388 aaPredicted RBP20.76■□□□□ 0.91
ITM2C-204ENST00000409704 STXBP2Q15833 593 aa20.76■□□□□ 0.91
ITM2C-204ENST00000409704 PIBF1Q8WXW3 757 aa20.76■□□□□ 0.91
ITM2C-204ENST00000409704 NEK1Q96PY6 1258 aa20.76■□□□□ 0.91
ITM2C-204ENST00000409704 POLR3EQ9NVU0 708 aa20.76■□□□□ 0.91
ITM2C-204ENST00000409704 GRIN2DO15399 1336 aa20.76■□□□□ 0.91
ITM2C-204ENST00000409704 TLR3O15455 904 aaKnown RBP20.75■□□□□ 0.91
ITM2C-204ENST00000409704 ITGA7Q13683 1181 aa20.75■□□□□ 0.91
ITM2C-204ENST00000409704 TSGA10IPQ3SY00 556 aa20.75■□□□□ 0.91
ITM2C-204ENST00000409704 CCDC62Q6P9F0 684 aa20.75■□□□□ 0.91
ITM2C-204ENST00000409704 SGMS1Q86VZ5 419 aa20.75■□□□□ 0.91
ITM2C-204ENST00000409704 RAB11FIP4Q86YS3 637 aa20.75■□□□□ 0.91
ITM2C-204ENST00000409704 RASEFQ8IZ41 740 aa20.75■□□□□ 0.91
ITM2C-204ENST00000409704 PDCD2LQ9BRP1 358 aa20.75■□□□□ 0.91
ITM2C-204ENST00000409704 CD4P01730 458 aa20.74■□□□□ 0.91
ITM2C-204ENST00000409704 NR3C2P08235 984 aa20.74■□□□□ 0.91
ITM2C-204ENST00000409704 SMARCA1P28370 1054 aa20.74■□□□□ 0.91
ITM2C-204ENST00000409704 GNAQP50148 359 aa20.74■□□□□ 0.91
ITM2C-204ENST00000409704 PSMC6P62333 389 aa20.74■□□□□ 0.91
ITM2C-204ENST00000409704 PURAQ00577 322 aaKnown RBP20.74■□□□□ 0.91
ITM2C-204ENST00000409704 KRT32Q14532 448 aa20.74■□□□□ 0.91
ITM2C-204ENST00000409704 ADCK5Q3MIX3 580 aa20.74■□□□□ 0.91
ITM2C-204ENST00000409704 SEPT14Q6ZU15 432 aa20.74■□□□□ 0.91
ITM2C-204ENST00000409704 MICU3Q86XE3 530 aa20.74■□□□□ 0.91
ITM2C-204ENST00000409704 SRBD1Q8N5C6 995 aaKnown RBP20.74■□□□□ 0.91
ITM2C-204ENST00000409704 RRP36Q96EU6 259 aaKnown RBP20.74■□□□□ 0.91
ITM2C-204ENST00000409704 LZTS2Q9BRK4 669 aa20.74■□□□□ 0.91
ITM2C-204ENST00000409704 SLC12A7Q9Y666 1083 aa20.74■□□□□ 0.91
ITM2C-204ENST00000409704 FRMPD4Q14CM0 1322 aa20.74■□□□□ 0.91
ITM2C-204ENST00000409704 TANC1Q9C0D5 1861 aa20.73■□□□□ 0.91
ITM2C-204ENST00000409704 GCOM1H8Y6P7 765 aaPredicted RBP20.73■□□□□ 0.91
ITM2C-204ENST00000409704 MYL3P08590 195 aa20.73■□□□□ 0.91
ITM2C-204ENST00000409704 POLR2MP0CAP2 368 aa20.73■□□□□ 0.91
ITM2C-204ENST00000409704 FPGSQ05932 587 aa20.73■□□□□ 0.91
ITM2C-204ENST00000409704 PGM5Q15124 567 aa20.73■□□□□ 0.91
ITM2C-204ENST00000409704 BRDTQ58F21 947 aaPredicted RBP20.73■□□□□ 0.91
ITM2C-204ENST00000409704 C9orf50Q5SZB4 431 aa20.73■□□□□ 0.91
ITM2C-204ENST00000409704 IL31RAQ8NI17 732 aa20.73■□□□□ 0.91
ITM2C-204ENST00000409704 TCEANC2Q96MN5 208 aa20.73■□□□□ 0.91
ITM2C-204ENST00000409704 SEZ6LQ9BYH1 1024 aa20.73■□□□□ 0.91
ITM2C-204ENST00000409704 SEC63Q9UGP8 760 aaKnown RBP20.73■□□□□ 0.91
ITM2C-204ENST00000409704 LAMA2P24043 3122 aaKnown RBP20.73■□□□□ 0.91
ITM2C-204ENST00000409704 A6NJR5 290 aa20.72■□□□□ 0.91
ITM2C-204ENST00000409704 EIF3JO75822 258 aaKnown RBP20.72■□□□□ 0.91
ITM2C-204ENST00000409704 TIMP1P01033 207 aa20.72■□□□□ 0.91
ITM2C-204ENST00000409704 ARHGAP1Q07960 439 aa20.72■□□□□ 0.91
ITM2C-204ENST00000409704 SHHQ15465 462 aa20.72■□□□□ 0.91
ITM2C-204ENST00000409704 LY6KQ17RY6 165 aa20.72■□□□□ 0.91
ITM2C-204ENST00000409704 GPR153Q6NV75 609 aa20.72■□□□□ 0.91
ITM2C-204ENST00000409704 APOA5Q6Q788 366 aa20.72■□□□□ 0.91
ITM2C-204ENST00000409704 TMTC3Q6ZXV5 915 aa20.72■□□□□ 0.91
ITM2C-204ENST00000409704 CMTR1Q8N1G2 835 aaKnown RBP20.72■□□□□ 0.91
ITM2C-204ENST00000409704 MTG1Q9BT17 334 aaPredicted RBP20.72■□□□□ 0.91
ITM2C-204ENST00000409704 B4GALT4O60513 344 aa20.71■□□□□ 0.91
ITM2C-204ENST00000409704 GH1P01241 217 aa20.71■□□□□ 0.91
ITM2C-204ENST00000409704 EPHB4P54760 987 aa20.71■□□□□ 0.91
ITM2C-204ENST00000409704 EXOSC10Q01780 885 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms