RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 SLC39A2Q9NP94 309 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 REXO2Q9Y3B8 237 aaKnown RBP18.8■□□□□ 0.6
NUP50-203ENST00000407019 NRXN2Q9P2S2 1712 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 ZBTB5O15062 677 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 TRIM21P19474 475 aaKnown RBP18.8■□□□□ 0.6
NUP50-203ENST00000407019 SLC16A2P36021 539 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 MRPL12P52815 198 aaKnown RBP18.8■□□□□ 0.6
NUP50-203ENST00000407019 MEA1Q16626 185 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 CENPPQ6IPU0 288 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 HPS3Q969F9 1004 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 EEF2KMTQ96G04 330 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 LRRC27Q9C0I9 530 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 SEMA6BQ9H3T3 888 aa18.8■□□□□ 0.6
NUP50-203ENST00000407019 GREB1LQ9C091 1923 aaPredicted RBP18.79■□□□□ 0.6
NUP50-203ENST00000407019 TMEM119Q4V9L6 283 aa18.79■□□□□ 0.6
NUP50-203ENST00000407019 ZSCAN29Q8IWY8 852 aaPredicted RBP18.79■□□□□ 0.6
NUP50-203ENST00000407019 MTMR8Q96EF0 704 aa18.79■□□□□ 0.6
NUP50-203ENST00000407019 CCDC17Q96LX7 622 aa18.79■□□□□ 0.6
NUP50-203ENST00000407019 DDX25Q9UHL0 483 aaKnown RBP18.79■□□□□ 0.6
NUP50-203ENST00000407019 USP17L10C9JJH3 530 aa18.78■□□□□ 0.6
NUP50-203ENST00000407019 ATP8B1O43520 1251 aa18.78■□□□□ 0.6
NUP50-203ENST00000407019 GCFC2P16383 781 aaKnown RBP18.78■□□□□ 0.6
NUP50-203ENST00000407019 HOXA7P31268 230 aaPredicted RBP18.78■□□□□ 0.6
NUP50-203ENST00000407019 HSPA1LP34931 641 aa18.78■□□□□ 0.6
NUP50-203ENST00000407019 CRKP46108 304 aa18.78■□□□□ 0.6
NUP50-203ENST00000407019 NFIAQ12857 509 aa18.78■□□□□ 0.6
NUP50-203ENST00000407019 MIIPQ5JXC2 388 aa18.78■□□□□ 0.6
NUP50-203ENST00000407019 WDR59Q6PJI9 974 aa18.78■□□□□ 0.6
NUP50-203ENST00000407019 KCTD1Q719H9 257 aa18.78■□□□□ 0.6
NUP50-203ENST00000407019 DYMQ7RTS9 669 aa18.78■□□□□ 0.6
NUP50-203ENST00000407019 PARD6BQ9BYG5 372 aa18.78■□□□□ 0.6
NUP50-203ENST00000407019 ZNHIT6Q9NWK9 470 aaKnown RBP18.78■□□□□ 0.6
NUP50-203ENST00000407019 PUF60Q9UHX1 559 aaKnown RBP18.78■□□□□ 0.6
NUP50-203ENST00000407019 PDE6BP35913 854 aa18.78■□□□□ 0.6
NUP50-203ENST00000407019 ZBED6P86452 979 aa18.78■□□□□ 0.6
NUP50-203ENST00000407019 FKBP15Q5T1M5 1219 aa18.78■□□□□ 0.6
NUP50-203ENST00000407019 CC2D1AQ6P1N0 951 aaPredicted RBP18.78■□□□□ 0.6
NUP50-203ENST00000407019 PCMTD1Q96MG8 357 aaPredicted RBP18.78■□□□□ 0.6
NUP50-203ENST00000407019 ERGIC2Q96RQ1 377 aa18.78■□□□□ 0.6
NUP50-203ENST00000407019 HAUS4Q9H6D7 363 aa18.78■□□□□ 0.6
NUP50-203ENST00000407019 ZSWIM4Q9H7M6 989 aa18.78■□□□□ 0.6
NUP50-203ENST00000407019 RASSF10A6NK89 507 aa18.77■□□□□ 0.6
NUP50-203ENST00000407019 SEC31AO94979 1220 aaKnown RBP18.77■□□□□ 0.6
NUP50-203ENST00000407019 KLK7P49862 253 aa18.77■□□□□ 0.6
NUP50-203ENST00000407019 WHAMMP3Q1A5X7 153 aa18.77■□□□□ 0.6
NUP50-203ENST00000407019 FIGNQ5HY92 759 aa18.77■□□□□ 0.6
NUP50-203ENST00000407019 GUF1Q8N442 669 aaKnown RBP18.77■□□□□ 0.6
NUP50-203ENST00000407019 MASTLQ96GX5 879 aa18.77■□□□□ 0.6
NUP50-203ENST00000407019 NAP1L4Q99733 375 aaKnown RBP18.77■□□□□ 0.6
NUP50-203ENST00000407019 NUDT12Q9BQG2 462 aa18.77■□□□□ 0.6
NUP50-203ENST00000407019 PSTPIP2Q9H939 334 aa18.77■□□□□ 0.6
NUP50-203ENST00000407019 AGPAT5Q9NUQ2 364 aa18.77■□□□□ 0.6
NUP50-203ENST00000407019 MARCH6O60337 910 aa18.77■□□□□ 0.59
NUP50-203ENST00000407019 FGFR1OPO95684 399 aaKnown RBP18.77■□□□□ 0.59
NUP50-203ENST00000407019 CYLC1P35663 651 aaPredicted RBP18.77■□□□□ 0.59
NUP50-203ENST00000407019 TUBB4BP68371 445 aa18.77■□□□□ 0.59
NUP50-203ENST00000407019 KRT83P78385 493 aa18.77■□□□□ 0.59
NUP50-203ENST00000407019 COL23A1Q86Y22 540 aaPredicted RBP18.77■□□□□ 0.59
NUP50-203ENST00000407019 IQCDQ96DY2 449 aa18.77■□□□□ 0.59
NUP50-203ENST00000407019 ZDHHC15Q96MV8 337 aa18.77■□□□□ 0.59
NUP50-203ENST00000407019 COL11A2P13942 1736 aaPredicted RBP18.76■□□□□ 0.59
NUP50-203ENST00000407019 BRWD3Q6RI45 1802 aa18.76■□□□□ 0.59
NUP50-203ENST00000407019 A0A1W2PQJ5 194 aa18.76■□□□□ 0.59
NUP50-203ENST00000407019 IDEP14735 1019 aa18.76■□□□□ 0.59
NUP50-203ENST00000407019 HERVK_113P62684 666 aa18.76■□□□□ 0.59
NUP50-203ENST00000407019 DDX12PQ92771 950 aa18.76■□□□□ 0.59
NUP50-203ENST00000407019 GLT8D2Q9H1C3 349 aa18.76■□□□□ 0.59
NUP50-203ENST00000407019 DNAJC18Q9H819 358 aa18.76■□□□□ 0.59
NUP50-203ENST00000407019 TRIM10Q9UDY6 481 aa18.76■□□□□ 0.59
NUP50-203ENST00000407019 GUCA1BQ9UMX6 200 aa18.76■□□□□ 0.59
NUP50-203ENST00000407019 MYH4Q9Y623 1939 aa18.76■□□□□ 0.59
NUP50-203ENST00000407019 POTEB2H3BUK9 544 aa18.75■□□□□ 0.59
NUP50-203ENST00000407019 LRRC63Q05C16 580 aa18.75■□□□□ 0.59
NUP50-203ENST00000407019 PSMD2Q13200 908 aa18.75■□□□□ 0.59
NUP50-203ENST00000407019 KCNK18Q7Z418 384 aa18.75■□□□□ 0.59
NUP50-203ENST00000407019 PODNQ7Z5L7 613 aa18.75■□□□□ 0.59
NUP50-203ENST00000407019 ZFPM1Q8IX07 1006 aa18.75■□□□□ 0.59
NUP50-203ENST00000407019 HAS1Q92839 578 aa18.75■□□□□ 0.59
NUP50-203ENST00000407019 DHX36Q9H2U1 1008 aaKnown RBP18.75■□□□□ 0.59
NUP50-203ENST00000407019 DBNDD1Q9H9R9 158 aa18.75■□□□□ 0.59
NUP50-203ENST00000407019 ARFGAP3Q9NP61 516 aa18.75■□□□□ 0.59
NUP50-203ENST00000407019 ATF5Q9Y2D1 282 aaPredicted RBP18.75■□□□□ 0.59
NUP50-203ENST00000407019 ABCB11O95342 1321 aa18.75■□□□□ 0.59
NUP50-203ENST00000407019 SLURP2P0DP57 97 aa18.75■□□□□ 0.59
NUP50-203ENST00000407019 PLA2G4AP47712 749 aa18.75■□□□□ 0.59
NUP50-203ENST00000407019 VWA3BQ502W6 1294 aa18.75■□□□□ 0.59
NUP50-203ENST00000407019 ZNF662Q6ZS27 426 aa18.75■□□□□ 0.59
NUP50-203ENST00000407019 CCDC170Q8IYT3 715 aa18.75■□□□□ 0.59
NUP50-203ENST00000407019 DCAF4Q8WV16 495 aa18.75■□□□□ 0.59
NUP50-203ENST00000407019 PRDM4Q9UKN5 801 aa18.75■□□□□ 0.59
NUP50-203ENST00000407019 KDM3AQ9Y4C1 1321 aa18.74■□□□□ 0.59
NUP50-203ENST00000407019 AMPD2Q01433 879 aa18.74■□□□□ 0.59
NUP50-203ENST00000407019 EHHADHQ08426 723 aa18.74■□□□□ 0.59
NUP50-203ENST00000407019 SEPT2Q15019 361 aa18.74■□□□□ 0.59
NUP50-203ENST00000407019 KIAA1328Q86T90 577 aa18.74■□□□□ 0.59
NUP50-203ENST00000407019 CCDC151A5D8V7 595 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 PSMD14O00487 310 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 RAD21O60216 631 aa18.73■□□□□ 0.59
NUP50-203ENST00000407019 IPO7O95373 1038 aaKnown RBP18.73■□□□□ 0.59
NUP50-203ENST00000407019 TBC1D8O95759 1140 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms