RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 GMNNO75496 209 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 GAS8O95995 478 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 EIF2S1P05198 315 aaKnown RBP10.86□□□□□ -0.67
PTPRM-203ENST00000400060 INF2Q27J81 1249 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 BZW1Q7L1Q6 419 aaKnown RBP10.86□□□□□ -0.67
PTPRM-203ENST00000400060 CD302Q8IX05 232 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 MB21D1Q8N884 522 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 CEP70Q8NHQ1 597 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 MGARPQ8TDB4 240 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 FOXP1Q9H334 677 aaPredicted RBP10.86□□□□□ -0.67
PTPRM-203ENST00000400060 NRDE2Q9H7Z3 1164 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 ETNK1Q9HBU6 452 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 NCOA5Q9HCD5 579 aaKnown RBP10.86□□□□□ -0.67
PTPRM-203ENST00000400060 ATG3Q9NT62 314 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 DLGAP2Q9P1A6 1054 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.86□□□□□ -0.67
PTPRM-203ENST00000400060 CEBPAP49715 358 aaPredicted RBP10.86□□□□□ -0.67
PTPRM-203ENST00000400060 TMED10P49755 219 aaKnown RBP10.86□□□□□ -0.67
PTPRM-203ENST00000400060 TCP11X2Q5H9J9 407 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 PAPD7Q5XG87 772 aaKnown RBP10.86□□□□□ -0.67
PTPRM-203ENST00000400060 IFNL2Q8IZJ0 200 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 TBC1D23Q9NUY8 699 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 CCNHP51946 323 aaPredicted RBP10.86□□□□□ -0.67
PTPRM-203ENST00000400060 NR1I3Q14994 352 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 METTL24Q5JXM2 366 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 WASHC2DQ5SRD0 308 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 ZNF449Q6P9G9 518 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 RBM12BQ8IXT5 1001 aaKnown RBP10.86□□□□□ -0.67
PTPRM-203ENST00000400060 KCNV2Q8TDN2 545 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 EZH1Q92800 747 aaPredicted RBP10.86□□□□□ -0.67
PTPRM-203ENST00000400060 LRWD1Q9UFC0 647 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 INTUQ9ULD6 942 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 STRNO43815 780 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 RRAGAQ7L523 313 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 GSDMBQ8TAX9 411 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 UIMC1Q96RL1 719 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 ZHX3Q9H4I2 956 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 RPL26L1Q9UNX3 145 aaKnown RBP10.86□□□□□ -0.67
PTPRM-203ENST00000400060 ABCA9Q8IUA7 1624 aa10.86□□□□□ -0.67
PTPRM-203ENST00000400060 ATP1A1P05023 1023 aaKnown RBP10.85□□□□□ -0.67
PTPRM-203ENST00000400060 UQCRFS1P1P0C7P4 283 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 MSH2P43246 934 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 SERPINB4P48594 390 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 ELF3P78545 371 aaPredicted RBP10.85□□□□□ -0.67
PTPRM-203ENST00000400060 PDE4DQ08499 809 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 EIF1ADQ8N9N8 165 aaKnown RBP10.85□□□□□ -0.67
PTPRM-203ENST00000400060 FAM129AQ9BZQ8 928 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 SAMSN1Q9NSI8 373 aaKnown RBP10.85□□□□□ -0.67
PTPRM-203ENST00000400060 NDE1Q9NXR1 346 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 ANKIB1Q9P2G1 1089 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 CD2APQ9Y5K6 639 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 SLC4A7Q9Y6M7 1214 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 SYF2O95926 243 aaKnown RBP10.85□□□□□ -0.67
PTPRM-203ENST00000400060 AKAP4Q5JQC9 854 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 TTC38Q5R3I4 469 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 PSMB7Q99436 277 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 TMBIM4Q9HC24 238 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 CABP5Q9NP86 173 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 MAP3K15Q6ZN16 1313 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 IQCA1LA6NCM1 817 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 PODXLO00592 558 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 IDH1O75874 414 aaKnown RBP10.85□□□□□ -0.67
PTPRM-203ENST00000400060 PRR29P0C7W0 189 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 CDR2Q01850 454 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 SNX1Q13596 522 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 CROCCP3Q8IVE0 287 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 GSPT2Q8IYD1 628 aaKnown RBP10.85□□□□□ -0.67
PTPRM-203ENST00000400060 DRAXINQ8NBI3 349 aaPredicted RBP10.85□□□□□ -0.67
PTPRM-203ENST00000400060 C1orf131Q8NDD1 294 aaKnown RBP10.85□□□□□ -0.67
PTPRM-203ENST00000400060 PI4K2BQ8TCG2 481 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 CASP10Q92851 521 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 LRRC37BQ96QE4 947 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 PAGR1Q9BTK6 254 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 SEC63Q9UGP8 760 aaKnown RBP10.85□□□□□ -0.67
PTPRM-203ENST00000400060 LIMA1Q9UHB6 759 aaKnown RBP10.85□□□□□ -0.67
PTPRM-203ENST00000400060 G3BP2Q9UN86 482 aaKnown RBP10.85□□□□□ -0.67
PTPRM-203ENST00000400060 LRCH1Q9Y2L9 728 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 TSC22D4Q9Y3Q8 395 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 WDR19Q8NEZ3 1342 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 FAM187AA6NFU0 413 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 FOXP2O15409 715 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 TAF5LO75529 589 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 HAND2P61296 217 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 NOP14P78316 857 aaKnown RBP10.85□□□□□ -0.67
PTPRM-203ENST00000400060 SLC7A5Q01650 507 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 LBRQ14739 615 aaKnown RBP10.85□□□□□ -0.67
PTPRM-203ENST00000400060 KRT31Q15323 416 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 LGSNQ5TDP6 509 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 SCYL3Q8IZE3 742 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 ENGASEQ8NFI3 743 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 ESR2Q92731 530 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 DDX23Q9BUQ8 820 aaKnown RBP10.85□□□□□ -0.67
PTPRM-203ENST00000400060 ZNF287Q9HBT7 754 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 CHPF2Q9P2E5 772 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 ABCF2Q9UG63 623 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 COMMD3-BMI1R4GMX3 469 aa10.85□□□□□ -0.67
PTPRM-203ENST00000400060 USP42Q9H9J4 1324 aaKnown RBP10.85□□□□□ -0.67
PTPRM-203ENST00000400060 LGALS16A8MUM7 142 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 IFNAR2P48551 515 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 TOB2Q14106 344 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms