RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 EPN3Q9H201 632 aa18.09■□□□□ 0.49
PHTF1-205ENST00000393357 LRRC4CQ9HCJ2 640 aa18.09■□□□□ 0.49
PHTF1-205ENST00000393357 RAD21O60216 631 aa18.09■□□□□ 0.49
PHTF1-205ENST00000393357 TXNRD1Q16881 649 aa18.09■□□□□ 0.49
PHTF1-205ENST00000393357 BICDL1Q6ZP65 573 aa18.09■□□□□ 0.49
PHTF1-205ENST00000393357 MICALCLQ6ZW33 695 aa18.09■□□□□ 0.49
PHTF1-205ENST00000393357 NLRP10Q86W26 655 aa18.09■□□□□ 0.49
PHTF1-205ENST00000393357 STAG1Q8WVM7 1258 aa18.09■□□□□ 0.49
PHTF1-205ENST00000393357 LPIN2Q92539 896 aa18.09■□□□□ 0.49
PHTF1-205ENST00000393357 TBC1D5Q92609 795 aa18.09■□□□□ 0.49
PHTF1-205ENST00000393357 ISCA1Q9BUE6 129 aa18.09■□□□□ 0.49
PHTF1-205ENST00000393357 RAD51CO43502 376 aa18.08■□□□□ 0.49
PHTF1-205ENST00000393357 UQCRFS1P1P0C7P4 283 aa18.08■□□□□ 0.49
PHTF1-205ENST00000393357 PSEN1P49768 467 aa18.08■□□□□ 0.49
PHTF1-205ENST00000393357 POLR2FP61218 127 aaKnown RBP18.08■□□□□ 0.49
PHTF1-205ENST00000393357 IFFO1Q0D2I5 559 aa18.08■□□□□ 0.49
PHTF1-205ENST00000393357 FAM133BQ5BKY9 247 aaKnown RBP18.08■□□□□ 0.49
PHTF1-205ENST00000393357 HIBCHQ6NVY1 386 aaPredicted RBP18.08■□□□□ 0.49
PHTF1-205ENST00000393357 TTI2Q6NXR4 508 aa18.08■□□□□ 0.49
PHTF1-205ENST00000393357 TMOD3Q9NYL9 352 aa18.08■□□□□ 0.49
PHTF1-205ENST00000393357 MDH1P40925 334 aaKnown RBP18.08■□□□□ 0.48
PHTF1-205ENST00000393357 KIAA0753Q2KHM9 967 aa18.08■□□□□ 0.48
PHTF1-205ENST00000393357 CYFIP2Q96F07 1278 aa18.08■□□□□ 0.48
PHTF1-205ENST00000393357 NOX5Q96PH1 765 aa18.08■□□□□ 0.48
PHTF1-205ENST00000393357 MED1Q15648 1581 aaPredicted RBP18.08■□□□□ 0.48
PHTF1-205ENST00000393357 ELF1P32519 619 aa18.08■□□□□ 0.48
PHTF1-205ENST00000393357 FLT3P36888 993 aa18.08■□□□□ 0.48
PHTF1-205ENST00000393357 NPY5RQ15761 445 aa18.08■□□□□ 0.48
PHTF1-205ENST00000393357 SWT1Q5T5J6 900 aaKnown RBP18.08■□□□□ 0.48
PHTF1-205ENST00000393357 PLCD4Q9BRC7 762 aa18.08■□□□□ 0.48
PHTF1-205ENST00000393357 DNM1LO00429 736 aa18.07■□□□□ 0.48
PHTF1-205ENST00000393357 EEF1GP26641 437 aaKnown RBP18.07■□□□□ 0.48
PHTF1-205ENST00000393357 FNTAP49354 379 aa18.07■□□□□ 0.48
PHTF1-205ENST00000393357 SPTY2D1Q68D10 685 aaPredicted RBP18.07■□□□□ 0.48
PHTF1-205ENST00000393357 CABP7Q86V35 215 aa18.07■□□□□ 0.48
PHTF1-205ENST00000393357 VEZTQ9HBM0 779 aa18.07■□□□□ 0.48
PHTF1-205ENST00000393357 PDS5AQ29RF7 1337 aaKnown RBP18.07■□□□□ 0.48
PHTF1-205ENST00000393357 KLRC1P26715 233 aa18.07■□□□□ 0.48
PHTF1-205ENST00000393357 ADCY1Q08828 1119 aa18.07■□□□□ 0.48
PHTF1-205ENST00000393357 KRT71Q3SY84 523 aa18.07■□□□□ 0.48
PHTF1-205ENST00000393357 SMIM5Q71RC9 77 aa18.07■□□□□ 0.48
PHTF1-205ENST00000393357 BLIDQ8IZY5 108 aa18.07■□□□□ 0.48
PHTF1-205ENST00000393357 CELF4Q9BZC1 486 aaKnown RBP18.07■□□□□ 0.48
PHTF1-205ENST00000393357 NDST4Q9H3R1 872 aa18.07■□□□□ 0.48
PHTF1-205ENST00000393357 L3MBTL1Q9Y468 752 aa18.07■□□□□ 0.48
PHTF1-205ENST00000393357 AFDNP55196 1824 aaKnown RBP18.06■□□□□ 0.48
PHTF1-205ENST00000393357 GCOM1H8Y6P7 765 aaPredicted RBP18.06■□□□□ 0.48
PHTF1-205ENST00000393357 CHUKO15111 745 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 PRPF3O43395 683 aaKnown RBP18.06■□□□□ 0.48
PHTF1-205ENST00000393357 MYZAPP0CAP1 466 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 TCP1P17987 556 aaKnown RBP18.06■□□□□ 0.48
PHTF1-205ENST00000393357 SLCO1A2P46721 670 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 TROAPQ12815 778 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 PAK2Q13177 524 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 NEDD9Q14511 834 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 EMBQ6PCB8 327 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 FAM133AQ8N9E0 248 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 MLXIPLQ9NP71 852 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 ZBTB1Q9Y2K1 713 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 CD2APQ9Y5K6 639 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 EVA1CP58658 441 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 MAGOHP61326 146 aaKnown RBP18.06■□□□□ 0.48
PHTF1-205ENST00000393357 ACCSLQ4AC99 568 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 MMGT1Q8N4V1 131 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 CCDC47Q96A33 483 aaKnown RBP18.06■□□□□ 0.48
PHTF1-205ENST00000393357 MAGOHBQ96A72 148 aaKnown RBP18.06■□□□□ 0.48
PHTF1-205ENST00000393357 DYNLL2Q96FJ2 89 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 TCP11L1Q9NUJ3 509 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 MARCH6O60337 910 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 SEC23AQ15436 765 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 SNCBQ16143 134 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 KLHDC7AQ5VTJ3 777 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 TMTC3Q6ZXV5 915 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 TBC1D1Q86TI0 1168 aaPredicted RBP18.06■□□□□ 0.48
PHTF1-205ENST00000393357 MSL3Q8N5Y2 521 aaKnown RBP18.06■□□□□ 0.48
PHTF1-205ENST00000393357 MGARPQ8TDB4 240 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 TAF4BQ92750 862 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 ATP6V1G3Q96LB4 118 aa18.06■□□□□ 0.48
PHTF1-205ENST00000393357 DDX20Q9UHI6 824 aaKnown RBP18.06■□□□□ 0.48
PHTF1-205ENST00000393357 DHX9Q08211 1270 aaKnown RBP18.05■□□□□ 0.48
PHTF1-205ENST00000393357 ELOA2Q8IYF1 753 aaPredicted RBP18.05■□□□□ 0.48
PHTF1-205ENST00000393357 FNBP4Q8N3X1 1017 aaPredicted RBP18.05■□□□□ 0.48
PHTF1-205ENST00000393357 LBHD1Q9BQE6 289 aaPredicted RBP18.05■□□□□ 0.48
PHTF1-205ENST00000393357 ANO9A1A5B4 782 aa18.05■□□□□ 0.48
PHTF1-205ENST00000393357 FECHP22830 423 aa18.05■□□□□ 0.48
PHTF1-205ENST00000393357 NAIF1Q69YI7 327 aaPredicted RBP18.05■□□□□ 0.48
PHTF1-205ENST00000393357 CDK5RAP3Q96JB5 506 aa18.05■□□□□ 0.48
PHTF1-205ENST00000393357 TFCP2L1Q9NZI6 479 aa18.05■□□□□ 0.48
PHTF1-205ENST00000393357 AMACRQ9UHK6 382 aa18.05■□□□□ 0.48
PHTF1-205ENST00000393357 USP17L3A6NCW0 530 aa18.04■□□□□ 0.48
PHTF1-205ENST00000393357 USP17L4A6NCW7 530 aa18.04■□□□□ 0.48
PHTF1-205ENST00000393357 TRAF5O00463 557 aa18.04■□□□□ 0.48
PHTF1-205ENST00000393357 MIIPQ5JXC2 388 aa18.04■□□□□ 0.48
PHTF1-205ENST00000393357 ALS2CLQ60I27 953 aa18.04■□□□□ 0.48
PHTF1-205ENST00000393357 MSL1Q68DK7 614 aa18.04■□□□□ 0.48
PHTF1-205ENST00000393357 CYB5D1Q6P9G0 228 aa18.04■□□□□ 0.48
PHTF1-205ENST00000393357 USP17L1Q7RTZ2 530 aa18.04■□□□□ 0.48
PHTF1-205ENST00000393357 ATP8A1Q9Y2Q0 1164 aa18.04■□□□□ 0.48
PHTF1-205ENST00000393357 N4BP2Q86UW6 1770 aaPredicted RBP18.04■□□□□ 0.48
PHTF1-205ENST00000393357 EPS15P42566 896 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms