RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 PNMA6AP0CW24 399 aaPredicted RBP9.21□□□□□ -0.94
VPS36-201ENST00000378060 KRT15P19012 456 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 PHKA1P46020 1223 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 ZBED6P86452 979 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 TBC1D9BQ66K14 1250 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 FBXO38Q6PIJ6 1188 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 SLFN12Q8IYM2 578 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.21□□□□□ -0.94
VPS36-201ENST00000378060 VTI1AQ96AJ9 217 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 FAM212AQ96EL1 285 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 BPIFA3Q9BQP9 254 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 RWDD2AQ9UIY3 292 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 FAM184BQ9ULE4 1060 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 BCORQ6W2J9 1755 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 SH2B2O14492 632 aaPredicted RBP9.21□□□□□ -0.94
VPS36-201ENST00000378060 CYP2E1P05181 493 aaPredicted RBP9.21□□□□□ -0.94
VPS36-201ENST00000378060 STX2P32856 288 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 EIF6P56537 245 aaKnown RBP9.21□□□□□ -0.94
VPS36-201ENST00000378060 SNX16P57768 344 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 TTLL12Q14166 644 aaPredicted RBP9.21□□□□□ -0.94
VPS36-201ENST00000378060 CCDC38Q502W7 563 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 RBM26Q5T8P6 1007 aaKnown RBP9.21□□□□□ -0.94
VPS36-201ENST00000378060 RUNDC3BQ96NL0 473 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 FTOQ9C0B1 505 aaKnown RBP eCLIP9.21□□□□□ -0.94
VPS36-201ENST00000378060 ALDH8A1Q9H2A2 487 aaPredicted RBP9.21□□□□□ -0.94
VPS36-201ENST00000378060 VCXQ9H320 206 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 KLHL14Q9P2G3 628 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 RRP15Q9Y3B9 282 aaKnown RBP9.21□□□□□ -0.94
VPS36-201ENST00000378060 JRKLQ9Y4A0 524 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 COL4A3BPQ9Y5P4 624 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 ABCC12Q96J65 1359 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 A0A087WUV0 522 aaPredicted RBP9.2□□□□□ -0.94
VPS36-201ENST00000378060 DCAF8L1A6NGE4 600 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 TERF2Q15554 542 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 ANKRD20A3Q5VUR7 823 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 SDR42E1Q8WUS8 393 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 P2RX5Q93086 422 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 VEZTQ9HBM0 779 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 BIN2Q9UBW5 565 aaPredicted RBP9.2□□□□□ -0.94
VPS36-201ENST00000378060 SERPINA10Q9UK55 444 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 ZDHHC9Q9Y397 364 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 PNPLA7Q6ZV29 1317 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 RFX7Q2KHR2 1363 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 SEC31AO94979 1220 aaKnown RBP9.2□□□□□ -0.94
VPS36-201ENST00000378060 ERCC3P19447 782 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 POLR2FP61218 127 aaKnown RBP9.2□□□□□ -0.94
VPS36-201ENST00000378060 GUCY2DQ02846 1103 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 STRN3Q13033 797 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 UAP1Q16222 522 aaPredicted RBP9.2□□□□□ -0.94
VPS36-201ENST00000378060 MAN2A1Q16706 1144 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 ARMC9Q7Z3E5 817 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 APBB1IPQ7Z5R6 666 aaPredicted RBP9.2□□□□□ -0.94
VPS36-201ENST00000378060 GRK7Q8WTQ7 553 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 OSBP2Q969R2 916 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 PUS3Q9BZE2 481 aaKnown RBP9.2□□□□□ -0.94
VPS36-201ENST00000378060 PANK4Q9NVE7 773 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 ADORA1P30542 326 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 LIG3P49916 1009 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 BCAMP50895 628 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 ATP1A2P50993 1020 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 FKBP3Q00688 224 aaKnown RBP9.2□□□□□ -0.94
VPS36-201ENST00000378060 ADAM9Q13443 819 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 DCUN1D2Q6PH85 259 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 PLA2G4DQ86XP0 818 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 VPS52Q8N1B4 723 aa9.2□□□□□ -0.94
VPS36-201ENST00000378060 TYW1Q9NV66 732 aaKnown RBP9.2□□□□□ -0.94
VPS36-201ENST00000378060 CPSF2Q9P2I0 782 aaKnown RBP9.2□□□□□ -0.94
VPS36-201ENST00000378060 CCT5P48643 541 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 RAD51AP2Q09MP3 1159 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 VCX3BQ9H321 246 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 PSTPIP2Q9H939 334 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 SLC39A2Q9NP94 309 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 FAM114A2Q9NRY5 505 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 STK17AQ9UEE5 414 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 SSX2IPQ9Y2D8 614 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 SCN7AQ01118 1682 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 ANKRD36CQ5JPF3 1778 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 PABPN1LA6NDY0 278 aaKnown RBP9.19□□□□□ -0.94
VPS36-201ENST00000378060 BUB1O43683 1085 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 HIP1RO75146 1068 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 TROVE2P10155 538 aaKnown RBP eCLIP9.19□□□□□ -0.94
VPS36-201ENST00000378060 CCNE1P24864 410 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 ARHGAP44Q17R89 818 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 ARL6IP4Q66PJ3 421 aaKnown RBP9.19□□□□□ -0.94
VPS36-201ENST00000378060 BBOF1Q8ND07 529 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 ARHGEF2Q92974 986 aaKnown RBP9.19□□□□□ -0.94
VPS36-201ENST00000378060 KIF2CQ99661 725 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 LARSQ9P2J5 1176 aaKnown RBP9.19□□□□□ -0.94
VPS36-201ENST00000378060 FAN1Q9Y2M0 1017 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 RPAP1Q9BWH6 1393 aaPredicted RBP9.19□□□□□ -0.94
VPS36-201ENST00000378060 ATP10DQ9P241 1426 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 RGPD3A6NKT7 1758 aaPredicted RBP9.19□□□□□ -0.94
VPS36-201ENST00000378060 RGPD4Q7Z3J3 1758 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 N4BP2Q86UW6 1770 aaPredicted RBP9.19□□□□□ -0.94
VPS36-201ENST00000378060 PRPF3O43395 683 aaKnown RBP9.19□□□□□ -0.94
VPS36-201ENST00000378060 NDUFA10O95299 355 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 FOSP01100 380 aaPredicted RBP9.19□□□□□ -0.94
VPS36-201ENST00000378060 ZNF131P52739 623 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 TRPC3Q13507 836 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 TOB2Q14106 344 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms