RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 HAUS4Q9H6D7 363 aa21.61■■□□□ 1.05
PCDH8-202ENST00000377942 MYO1AQ9UBC5 1043 aa21.61■■□□□ 1.05
PCDH8-202ENST00000377942 HNRNPDLO14979 420 aaKnown RBP21.61■■□□□ 1.05
PCDH8-202ENST00000377942 GPSM2P81274 684 aa21.61■■□□□ 1.05
PCDH8-202ENST00000377942 FAM81BQ96LP2 452 aa21.61■■□□□ 1.05
PCDH8-202ENST00000377942 TMEM47Q9BQJ4 181 aa21.61■■□□□ 1.05
PCDH8-202ENST00000377942 BZW2Q9Y6E2 419 aaKnown RBP21.61■■□□□ 1.05
PCDH8-202ENST00000377942 PNPLA7Q6ZV29 1317 aa21.61■■□□□ 1.05
PCDH8-202ENST00000377942 KIAA1210Q9ULL0 1709 aa21.61■■□□□ 1.05
PCDH8-202ENST00000377942 FKBP3Q00688 224 aaKnown RBP21.61■■□□□ 1.05
PCDH8-202ENST00000377942 EXOC3L4Q17RC7 722 aa21.61■■□□□ 1.05
PCDH8-202ENST00000377942 CNOT6LQ96LI5 555 aaKnown RBP21.61■■□□□ 1.05
PCDH8-202ENST00000377942 NACA2Q9H009 215 aa21.61■■□□□ 1.05
PCDH8-202ENST00000377942 LARGE1O95461 756 aa21.6■■□□□ 1.05
PCDH8-202ENST00000377942 POLR2BP30876 1174 aaKnown RBP21.6■■□□□ 1.05
PCDH8-202ENST00000377942 ARL1P40616 181 aaPredicted RBP21.6■■□□□ 1.05
PCDH8-202ENST00000377942 PDE6CP51160 858 aa21.6■■□□□ 1.05
PCDH8-202ENST00000377942 TDRD3Q9H7E2 651 aaKnown RBP21.6■■□□□ 1.05
PCDH8-202ENST00000377942 HESX1Q9UBX0 185 aa21.6■■□□□ 1.05
PCDH8-202ENST00000377942 PPP1R18Q6NYC8 613 aa21.6■■□□□ 1.05
PCDH8-202ENST00000377942 FBXO40Q9UH90 709 aa21.6■■□□□ 1.05
PCDH8-202ENST00000377942 PSMC2P35998 433 aaKnown RBP21.6■■□□□ 1.05
PCDH8-202ENST00000377942 TUBGCP2Q9BSJ2 902 aa21.6■■□□□ 1.05
PCDH8-202ENST00000377942 SORBS3O60504 671 aa21.6■■□□□ 1.05
PCDH8-202ENST00000377942 NSMCE1Q8WV22 266 aa21.6■■□□□ 1.05
PCDH8-202ENST00000377942 CCDC127Q96BQ5 260 aa21.6■■□□□ 1.05
PCDH8-202ENST00000377942 ASIC3Q9UHC3 531 aa21.6■■□□□ 1.05
PCDH8-202ENST00000377942 DLATP10515 647 aaKnown RBP21.59■■□□□ 1.05
PCDH8-202ENST00000377942 TERF1P54274 439 aa21.59■■□□□ 1.05
PCDH8-202ENST00000377942 POLR2FP61218 127 aaKnown RBP21.59■■□□□ 1.05
PCDH8-202ENST00000377942 SEPT14Q6ZU15 432 aa21.59■■□□□ 1.05
PCDH8-202ENST00000377942 NKIRAS1Q9NYS0 192 aa21.59■■□□□ 1.05
PCDH8-202ENST00000377942 ZBTB5O15062 677 aa21.59■■□□□ 1.05
PCDH8-202ENST00000377942 CYP2D6P10635 497 aa21.59■■□□□ 1.05
PCDH8-202ENST00000377942 NR2F2P24468 414 aa21.59■■□□□ 1.05
PCDH8-202ENST00000377942 PGBD1Q96JS3 809 aa21.59■■□□□ 1.05
PCDH8-202ENST00000377942 RIOK1Q9BRS2 568 aaKnown RBP21.59■■□□□ 1.05
PCDH8-202ENST00000377942 CPS1P31327 1500 aa21.59■■□□□ 1.05
PCDH8-202ENST00000377942 H2AFZP0C0S5 128 aa21.59■■□□□ 1.05
PCDH8-202ENST00000377942 H2AFVQ71UI9 128 aa21.59■■□□□ 1.05
PCDH8-202ENST00000377942 DAAM2Q86T65 1068 aa21.59■■□□□ 1.05
PCDH8-202ENST00000377942 APOBEC3FQ8IUX4 373 aaKnown RBP21.59■■□□□ 1.05
PCDH8-202ENST00000377942 CEP170P1Q96L14 293 aa21.59■■□□□ 1.05
PCDH8-202ENST00000377942 PLEKHA8P1O95397 391 aa21.59■■□□□ 1.05
PCDH8-202ENST00000377942 RNASE9P60153 205 aaKnown RBP21.59■■□□□ 1.05
PCDH8-202ENST00000377942 PAK2Q13177 524 aa21.59■■□□□ 1.05
PCDH8-202ENST00000377942 PPM1KQ8N3J5 372 aa21.59■■□□□ 1.05
PCDH8-202ENST00000377942 MARCH10Q8NA82 808 aaPredicted RBP21.59■■□□□ 1.05
PCDH8-202ENST00000377942 SMIM23A6NLE4 172 aa21.58■■□□□ 1.05
PCDH8-202ENST00000377942 PSAPP07602 524 aa21.58■■□□□ 1.05
PCDH8-202ENST00000377942 ALCAMQ13740 583 aa21.58■■□□□ 1.05
PCDH8-202ENST00000377942 LONRF3Q496Y0 759 aa21.58■■□□□ 1.05
PCDH8-202ENST00000377942 ATG9AQ7Z3C6 839 aa21.58■■□□□ 1.05
PCDH8-202ENST00000377942 MB21D2Q8IYB1 491 aaPredicted RBP21.58■■□□□ 1.05
PCDH8-202ENST00000377942 KMT5AQ9NQR1 393 aa21.58■■□□□ 1.05
PCDH8-202ENST00000377942 FEM1BQ9UK73 627 aa21.58■■□□□ 1.05
PCDH8-202ENST00000377942 PXDNLA1KZ92 1463 aa21.58■■□□□ 1.05
PCDH8-202ENST00000377942 CAMTA2O94983 1202 aa21.58■■□□□ 1.05
PCDH8-202ENST00000377942 ZBTB16Q05516 673 aa21.58■■□□□ 1.05
PCDH8-202ENST00000377942 PFKFB3Q16875 520 aaPredicted RBP21.58■■□□□ 1.05
PCDH8-202ENST00000377942 KCNK9Q9NPC2 374 aa21.58■■□□□ 1.05
PCDH8-202ENST00000377942 CD2APQ9Y5K6 639 aa21.58■■□□□ 1.05
PCDH8-202ENST00000377942 SAR1BQ9Y6B6 198 aa21.58■■□□□ 1.05
PCDH8-202ENST00000377942 SPATA31A5Q5VU36 1347 aa21.58■■□□□ 1.04
PCDH8-202ENST00000377942 SPATA31A7Q8IWB4 1347 aa21.58■■□□□ 1.04
PCDH8-202ENST00000377942 TOB2Q14106 344 aaPredicted RBP21.58■■□□□ 1.04
PCDH8-202ENST00000377942 FAM76AQ8TAV0 307 aa21.58■■□□□ 1.04
PCDH8-202ENST00000377942 NBPF3Q9H094 633 aa21.58■■□□□ 1.04
PCDH8-202ENST00000377942 ST7Q9NRC1 585 aa21.58■■□□□ 1.04
PCDH8-202ENST00000377942 HOXC10Q9NYD6 342 aa21.58■■□□□ 1.04
PCDH8-202ENST00000377942 IGBP1P78318 339 aa21.58■■□□□ 1.04
PCDH8-202ENST00000377942 NBPF11Q86T75 865 aa21.58■■□□□ 1.04
PCDH8-202ENST00000377942 NT5C1BQ96P26 610 aa21.58■■□□□ 1.04
PCDH8-202ENST00000377942 USP32Q8NFA0 1604 aa21.57■■□□□ 1.04
PCDH8-202ENST00000377942 ORC2Q13416 577 aaPredicted RBP21.57■■□□□ 1.04
PCDH8-202ENST00000377942 SPOUT1Q5T280 376 aaKnown RBP21.57■■□□□ 1.04
PCDH8-202ENST00000377942 RCSD1Q6JBY9 416 aa21.57■■□□□ 1.04
PCDH8-202ENST00000377942 PCDHB6Q9Y5E3 794 aa21.57■■□□□ 1.04
PCDH8-202ENST00000377942 NEDD4P46934 1319 aa21.57■■□□□ 1.04
PCDH8-202ENST00000377942 USP17L5A8MUK1 530 aa21.57■■□□□ 1.04
PCDH8-202ENST00000377942 ORC4O43929 436 aa21.57■■□□□ 1.04
PCDH8-202ENST00000377942 NKX1-1Q15270 411 aaPredicted RBP21.57■■□□□ 1.04
PCDH8-202ENST00000377942 HADHQ16836 314 aaKnown RBP21.57■■□□□ 1.04
PCDH8-202ENST00000377942 ALDH8A1Q9H2A2 487 aaPredicted RBP21.57■■□□□ 1.04
PCDH8-202ENST00000377942 ZEB2O60315 1214 aa21.57■■□□□ 1.04
PCDH8-202ENST00000377942 CSF1RP07333 972 aa21.57■■□□□ 1.04
PCDH8-202ENST00000377942 MFAP3P55082 362 aa21.57■■□□□ 1.04
PCDH8-202ENST00000377942 UBE2SQ16763 222 aa21.57■■□□□ 1.04
PCDH8-202ENST00000377942 CCDC105Q8IYK2 499 aa21.57■■□□□ 1.04
PCDH8-202ENST00000377942 FBF1Q8TES7 1133 aa21.57■■□□□ 1.04
PCDH8-202ENST00000377942 MAN2A1Q16706 1144 aa21.56■■□□□ 1.04
PCDH8-202ENST00000377942 WHAMMP3Q1A5X7 153 aa21.56■■□□□ 1.04
PCDH8-202ENST00000377942 RNF169Q8NCN4 708 aa21.56■■□□□ 1.04
PCDH8-202ENST00000377942 FAM193BQ96PV7 902 aaPredicted RBP21.56■■□□□ 1.04
PCDH8-202ENST00000377942 ANKFY1Q9P2R3 1169 aa21.56■■□□□ 1.04
PCDH8-202ENST00000377942 USP42Q9H9J4 1324 aaKnown RBP21.56■■□□□ 1.04
PCDH8-202ENST00000377942 GSG1L2A8MUP6 293 aa21.56■■□□□ 1.04
PCDH8-202ENST00000377942 FDX1P10109 184 aa21.56■■□□□ 1.04
PCDH8-202ENST00000377942 CACNB3P54284 484 aa21.56■■□□□ 1.04
PCDH8-202ENST00000377942 MYL7Q01449 175 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms