RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 THAP9Q9H5L6 903 aa14.38□□□□□ -0.11
USP11-204ENST00000377107 CALCOCO1Q9P1Z2 691 aa14.38□□□□□ -0.11
USP11-204ENST00000377107 NPHP3-ACAD11A0A0J9YXS1 232 aa14.38□□□□□ -0.11
USP11-204ENST00000377107 NCK2O43639 380 aa14.38□□□□□ -0.11
USP11-204ENST00000377107 TAL1P17542 331 aaPredicted RBP14.38□□□□□ -0.11
USP11-204ENST00000377107 EIF4A3P38919 411 aaKnown RBP14.38□□□□□ -0.11
USP11-204ENST00000377107 TCERG1LQ5VWI1 586 aa14.38□□□□□ -0.11
USP11-204ENST00000377107 LEKR1Q6ZMV7 388 aa14.38□□□□□ -0.11
USP11-204ENST00000377107 DHTKD1Q96HY7 919 aaPredicted RBP14.38□□□□□ -0.11
USP11-204ENST00000377107 RAB34Q9BZG1 259 aa14.38□□□□□ -0.11
USP11-204ENST00000377107 ZC3H12CQ9C0D7 883 aaKnown RBP14.38□□□□□ -0.11
USP11-204ENST00000377107 CCSER1Q9C0I3 900 aa14.38□□□□□ -0.11
USP11-204ENST00000377107 BMP2KQ9NSY1 1161 aaPredicted RBP14.38□□□□□ -0.11
USP11-204ENST00000377107 PAPPAQ13219 1627 aa14.38□□□□□ -0.11
USP11-204ENST00000377107 ITIH6Q6UXX5 1313 aa14.38□□□□□ -0.11
USP11-204ENST00000377107 LRRC10BA6NIK2 292 aa14.38□□□□□ -0.11
USP11-204ENST00000377107 DDX12PQ92771 950 aa14.38□□□□□ -0.11
USP11-204ENST00000377107 CAPN11Q9UMQ6 739 aa14.38□□□□□ -0.11
USP11-204ENST00000377107 POTEB2H3BUK9 544 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 MEIS1O00470 390 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 EPHB6O15197 1021 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 RASSF7Q02833 373 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 HERC4Q5GLZ8 1057 aaPredicted RBP14.37□□□□□ -0.11
USP11-204ENST00000377107 CCDC70Q6NSX1 233 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 ZMYND12Q9H0C1 365 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 MAGEA1P43355 309 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 BEND6Q5SZJ8 279 aaPredicted RBP14.37□□□□□ -0.11
USP11-204ENST00000377107 NEDD1Q8NHV4 660 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 TSG101Q99816 390 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 GBP3Q9H0R5 595 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 TMX4Q9H1E5 349 aaPredicted RBP14.37□□□□□ -0.11
USP11-204ENST00000377107 NDST4Q9H3R1 872 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 SEMA6BQ9H3T3 888 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.37□□□□□ -0.11
USP11-204ENST00000377107 POLLQ9UGP5 575 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 KIAA1024Q9UPX6 916 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 CHD4Q14839 1912 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 USP17L10C9JJH3 530 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 CYP2C19P33261 490 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 TMED8Q6PL24 325 aaPredicted RBP14.37□□□□□ -0.11
USP11-204ENST00000377107 KCNK18Q7Z418 384 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 KIAA0825Q8IV33 1275 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 KIAA0895Q8NCT3 520 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 DUOX1Q9NRD9 1551 aa14.37□□□□□ -0.11
USP11-204ENST00000377107 E9PMD0 336 aa14.36□□□□□ -0.11
USP11-204ENST00000377107 STAT3P40763 770 aa14.36□□□□□ -0.11
USP11-204ENST00000377107 ZBED6P86452 979 aa14.36□□□□□ -0.11
USP11-204ENST00000377107 RAPGEF1Q13905 1077 aa14.36□□□□□ -0.11
USP11-204ENST00000377107 ZSCAN26Q16670 478 aa14.36□□□□□ -0.11
USP11-204ENST00000377107 DDX25Q9UHL0 483 aaKnown RBP14.36□□□□□ -0.11
USP11-204ENST00000377107 PCDHA12Q9UN75 941 aa14.36□□□□□ -0.11
USP11-204ENST00000377107 TACC1O75410 805 aa14.36□□□□□ -0.11
USP11-204ENST00000377107 SRGNP10124 158 aa14.36□□□□□ -0.11
USP11-204ENST00000377107 PLCG2P16885 1265 aa14.36□□□□□ -0.11
USP11-204ENST00000377107 DNAAF5Q86Y56 855 aa14.36□□□□□ -0.11
USP11-204ENST00000377107 ZNF622Q969S3 477 aaKnown RBP eCLIP14.36□□□□□ -0.11
USP11-204ENST00000377107 LZTS2Q9BRK4 669 aa14.36□□□□□ -0.11
USP11-204ENST00000377107 ACBD3Q9H3P7 528 aa14.36□□□□□ -0.11
USP11-204ENST00000377107 MYH8P13535 1937 aa14.36□□□□□ -0.11
USP11-204ENST00000377107 DOT1LQ8TEK3 1739 aa14.36□□□□□ -0.11
USP11-204ENST00000377107 LRRC53A6NM62 1247 aa14.36□□□□□ -0.11
USP11-204ENST00000377107 PDHBP11177 359 aa14.36□□□□□ -0.11
USP11-204ENST00000377107 GFPT1Q06210 699 aaPredicted RBP14.36□□□□□ -0.11
USP11-204ENST00000377107 KCNB1Q14721 858 aa14.36□□□□□ -0.11
USP11-204ENST00000377107 SHROOM1Q2M3G4 852 aaPredicted RBP14.36□□□□□ -0.11
USP11-204ENST00000377107 RBM17Q96I25 401 aaKnown RBP14.36□□□□□ -0.11
USP11-204ENST00000377107 PDS5AQ29RF7 1337 aaKnown RBP14.35□□□□□ -0.11
USP11-204ENST00000377107 CYP4A11Q02928 519 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 GRB10Q13322 594 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 TTC19Q6DKK2 380 aaPredicted RBP14.35□□□□□ -0.11
USP11-204ENST00000377107 GALNT17Q6IS24 598 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 NFRKBQ6P4R8 1299 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 BARGINQ6ZT62 677 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 SLF2Q8IX21 1173 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 PSTPIP2Q9H939 334 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 DBNDD1Q9H9R9 158 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 MKRN1Q9UHC7 482 aaKnown RBP14.35□□□□□ -0.11
USP11-204ENST00000377107 CNTNAP4Q9C0A0 1308 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 POLR2FP61218 127 aaKnown RBP14.35□□□□□ -0.11
USP11-204ENST00000377107 EZH2Q15910 746 aaKnown RBP14.35□□□□□ -0.11
USP11-204ENST00000377107 SLC30A10Q6XR72 485 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 C16orf86Q6ZW13 317 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 TXLNBQ8N3L3 684 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 RSPH14Q9UHP6 348 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 DAGLAQ9Y4D2 1042 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 LRRIQ3A6PVS8 624 aaPredicted RBP14.35□□□□□ -0.11
USP11-204ENST00000377107 TOM1O60784 492 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 KIF11P52732 1056 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 VWA3BQ502W6 1294 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 ADGRF4Q8IZF3 695 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 IFT81Q8WYA0 676 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 AK8Q96MA6 479 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 MMTAG2Q9BU76 263 aaKnown RBP14.35□□□□□ -0.11
USP11-204ENST00000377107 CENPHQ9H3R5 247 aa14.35□□□□□ -0.11
USP11-204ENST00000377107 SND1Q7KZF4 910 aaKnown RBP eCLIP14.34□□□□□ -0.11
USP11-204ENST00000377107 C10orf67Q8IYJ2 551 aa14.34□□□□□ -0.11
USP11-204ENST00000377107 SPICE1Q8N0Z3 855 aa14.34□□□□□ -0.11
USP11-204ENST00000377107 ZNF507Q8TCN5 953 aa14.34□□□□□ -0.11
USP11-204ENST00000377107 NUP58Q9BVL2 599 aa14.34□□□□□ -0.11
USP11-204ENST00000377107 SPZ1Q9BXG8 430 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms