RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 IRX2Q9BZI1 471 aaPredicted RBP11.36□□□□□ -0.59
C9orf85-202ENST00000377027 IL17RBQ9NRM6 502 aa11.36□□□□□ -0.59
C9orf85-202ENST00000377027 SLC5A4Q9NY91 659 aa11.36□□□□□ -0.59
C9orf85-202ENST00000377027 STXBP5LQ9Y2K9 1186 aa11.36□□□□□ -0.59
C9orf85-202ENST00000377027 XIRP2A4UGR9 3374 aa11.36□□□□□ -0.59
C9orf85-202ENST00000377027 LAMA4Q16363 1823 aa11.36□□□□□ -0.59
C9orf85-202ENST00000377027 GBF1Q92538 1859 aa11.36□□□□□ -0.59
C9orf85-202ENST00000377027 SYNGAP1Q96PV0 1343 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 WNT7AO00755 349 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 CTAGE5O15320 804 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 NMT2O60551 498 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 RARBP10826 455 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 AKR1A1P14550 325 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 GNAT2P19087 354 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 PRR20EP86478 221 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 PRR20CP86479 221 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 PRR20DP86480 221 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 PRR20BP86481 221 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 PRR20AP86496 221 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 PPARAQ07869 468 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 CPXCR1Q8N123 301 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 PRPF38AQ8NAV1 312 aaKnown RBP11.35□□□□□ -0.59
C9orf85-202ENST00000377027 SLC17A8Q8NDX2 589 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 ARMC2Q8NEN0 867 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 KIFC2Q96AC6 838 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 CHMP4CQ96CF2 233 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 FAM161BQ96MY7 647 aa11.35□□□□□ -0.59
C9orf85-202ENST00000377027 PRDM5Q9NQX1 630 aaPredicted RBP11.35□□□□□ -0.59
C9orf85-202ENST00000377027 TNFRSF10AO00220 468 aa11.34□□□□□ -0.59
C9orf85-202ENST00000377027 GFRA3O60609 400 aa11.34□□□□□ -0.59
C9orf85-202ENST00000377027 TTLL1O95922 423 aa11.34□□□□□ -0.59
C9orf85-202ENST00000377027 MX1P20591 662 aa11.34□□□□□ -0.59
C9orf85-202ENST00000377027 NOVP48745 357 aa11.34□□□□□ -0.59
C9orf85-202ENST00000377027 RRP1P56182 461 aaKnown RBP11.34□□□□□ -0.59
C9orf85-202ENST00000377027 CNTN2Q02246 1040 aa11.34□□□□□ -0.59
C9orf85-202ENST00000377027 FAM109BQ6ICB4 259 aaPredicted RBP11.34□□□□□ -0.59
C9orf85-202ENST00000377027 GPATCH3Q96I76 525 aa11.34□□□□□ -0.59
C9orf85-202ENST00000377027 FSD1Q9BTV5 496 aa11.34□□□□□ -0.59
C9orf85-202ENST00000377027 TTYH1Q9H313 450 aaPredicted RBP11.34□□□□□ -0.59
C9orf85-202ENST00000377027 SYNPO2Q9UMS6 1093 aa11.34□□□□□ -0.59
C9orf85-202ENST00000377027 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.33□□□□□ -0.6
C9orf85-202ENST00000377027 KIAA0355O15063 1070 aa11.33□□□□□ -0.6
C9orf85-202ENST00000377027 APPP05067 770 aa11.33□□□□□ -0.6
C9orf85-202ENST00000377027 COPB2P35606 906 aa11.33□□□□□ -0.6
C9orf85-202ENST00000377027 ACLYP53396 1101 aa11.33□□□□□ -0.6
C9orf85-202ENST00000377027 SNAP25P60880 206 aa11.33□□□□□ -0.6
C9orf85-202ENST00000377027 TFAP4Q01664 338 aa11.33□□□□□ -0.6
C9orf85-202ENST00000377027 FAAP100Q0VG06 881 aa11.33□□□□□ -0.6
C9orf85-202ENST00000377027 TMEM63BQ5T3F8 832 aa11.33□□□□□ -0.6
C9orf85-202ENST00000377027 SLFN13Q68D06 897 aa11.33□□□□□ -0.6
C9orf85-202ENST00000377027 ZNF444Q8N0Y2 327 aaPredicted RBP11.33□□□□□ -0.6
C9orf85-202ENST00000377027 MSL3Q8N5Y2 521 aaKnown RBP11.33□□□□□ -0.6
C9orf85-202ENST00000377027 AGBL1Q96MI9 1066 aa11.33□□□□□ -0.6
C9orf85-202ENST00000377027 CRBNQ96SW2 442 aa11.33□□□□□ -0.6
C9orf85-202ENST00000377027 LBHD1Q9BQE6 289 aaPredicted RBP11.33□□□□□ -0.6
C9orf85-202ENST00000377027 UPF3AQ9H1J1 476 aaKnown RBP11.33□□□□□ -0.6
C9orf85-202ENST00000377027 FKBPLQ9UIM3 349 aa11.33□□□□□ -0.6
C9orf85-202ENST00000377027 FEM1BQ9UK73 627 aa11.33□□□□□ -0.6
C9orf85-202ENST00000377027 ZHX1Q9UKY1 873 aaPredicted RBP11.33□□□□□ -0.6
C9orf85-202ENST00000377027 TRANK1O15050 2925 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 A0A0D9SFI3 127 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 TMEM232C9JQI7 657 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 PQBP1O60828 265 aaKnown RBP11.32□□□□□ -0.6
C9orf85-202ENST00000377027 CLTBP09497 229 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 TSPY3P0CV98 308 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 TSPY8P0CW00 308 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 BMP3P12645 472 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 CST5P28325 142 aaPredicted RBP11.32□□□□□ -0.6
C9orf85-202ENST00000377027 ACVR2BQ13705 512 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 KCNA10Q16322 511 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 CCDC144BQ3MJ40 725 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 MUM1L1Q5H9M0 696 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 KCTD1Q719H9 257 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 ARMCX2Q7L311 632 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 ANKRD33Q7Z3H0 272 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 RNF180Q86T96 592 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 CCDC144CPQ8IYA2 1237 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 FAM133AQ8N9E0 248 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 GMCL1Q96IK5 515 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 MRGPRX2Q96LB1 330 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 FAM227BQ96M60 508 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 PURBQ96QR8 312 aaKnown RBP11.32□□□□□ -0.6
C9orf85-202ENST00000377027 NAPBQ9H115 298 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 A1CFQ9NQ94 594 aaKnown RBP11.32□□□□□ -0.6
C9orf85-202ENST00000377027 HOMER2Q9NSB8 354 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 TBX21Q9UL17 535 aa11.32□□□□□ -0.6
C9orf85-202ENST00000377027 DLL1O00548 723 aa11.31□□□□□ -0.6
C9orf85-202ENST00000377027 ERC2O15083 957 aa11.31□□□□□ -0.6
C9orf85-202ENST00000377027 ZBED4O75132 1171 aa11.31□□□□□ -0.6
C9orf85-202ENST00000377027 DUSP11O75319 330 aaKnown RBP11.31□□□□□ -0.6
C9orf85-202ENST00000377027 FGRP09769 529 aa11.31□□□□□ -0.6
C9orf85-202ENST00000377027 MCCP23508 829 aa11.31□□□□□ -0.6
C9orf85-202ENST00000377027 CDK7P50613 346 aa11.31□□□□□ -0.6
C9orf85-202ENST00000377027 OAZ1P54368 228 aa11.31□□□□□ -0.6
C9orf85-202ENST00000377027 ZNF589Q86UQ0 364 aaPredicted RBP11.31□□□□□ -0.6
C9orf85-202ENST00000377027 CHST13Q8NET6 341 aa11.31□□□□□ -0.6
C9orf85-202ENST00000377027 DDX11Q96FC9 970 aa11.31□□□□□ -0.6
C9orf85-202ENST00000377027 TSEN34Q9BSV6 310 aaKnown RBP11.31□□□□□ -0.6
C9orf85-202ENST00000377027 PRKAG2Q9UGJ0 569 aa11.31□□□□□ -0.6
C9orf85-202ENST00000377027 ANAPC4Q9UJX5 808 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 400.3 ms