RNA–Protein interactions for RNA: ENST00000376836.7

COMMD3-201, Transcript of COMM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-201ENST00000376836 DDX49Q9Y6V7 483 aaKnown RBP31.26■■■□□ 2.6
COMMD3-201ENST00000376836 BRCA2P51587 3418 aa31.26■■■□□ 2.59
COMMD3-201ENST00000376836 EIF2AK2P19525 551 aaKnown RBP31.25■■■□□ 2.59
COMMD3-201ENST00000376836 EDNRBP24530 442 aa31.25■■■□□ 2.59
COMMD3-201ENST00000376836 NEK4P51957 841 aa31.25■■■□□ 2.59
COMMD3-201ENST00000376836 STXBP2Q15833 593 aa31.25■■■□□ 2.59
COMMD3-201ENST00000376836 C22orf23Q9BZE7 217 aa31.25■■■□□ 2.59
COMMD3-201ENST00000376836 PXMP2Q9NR77 195 aa31.25■■■□□ 2.59
COMMD3-201ENST00000376836 GJC2Q5T442 439 aaPredicted RBP31.24■■■□□ 2.59
COMMD3-201ENST00000376836 DIS3LQ8TF46 1054 aaKnown RBP31.24■■■□□ 2.59
COMMD3-201ENST00000376836 GPKOWQ92917 476 aaPredicted RBP eCLIP31.24■■■□□ 2.59
COMMD3-201ENST00000376836 ADCYAP1R1P41586 468 aa31.24■■■□□ 2.59
COMMD3-201ENST00000376836 NAPAP54920 295 aa31.24■■■□□ 2.59
COMMD3-201ENST00000376836 STK3Q13188 491 aa31.24■■■□□ 2.59
COMMD3-201ENST00000376836 TAPT1Q6NXT6 567 aa31.24■■■□□ 2.59
COMMD3-201ENST00000376836 PPP1R18Q6NYC8 613 aa31.24■■■□□ 2.59
COMMD3-201ENST00000376836 PRPF3O43395 683 aaKnown RBP31.23■■■□□ 2.59
COMMD3-201ENST00000376836 PGK1P00558 417 aa31.23■■■□□ 2.59
COMMD3-201ENST00000376836 LRRC41Q15345 812 aa31.23■■■□□ 2.59
COMMD3-201ENST00000376836 WWC2Q6AWC2 1192 aa31.23■■■□□ 2.59
COMMD3-201ENST00000376836 TRIM22Q8IYM9 498 aa31.23■■■□□ 2.59
COMMD3-201ENST00000376836 AP5M1Q9H0R1 490 aa31.23■■■□□ 2.59
COMMD3-201ENST00000376836 SLKQ9H2G2 1235 aaPredicted RBP31.23■■■□□ 2.59
COMMD3-201ENST00000376836 NCOA5Q9HCD5 579 aaKnown RBP31.23■■■□□ 2.59
COMMD3-201ENST00000376836 PDE4DIPQ5VU43 2346 aa31.22■■■□□ 2.59
COMMD3-201ENST00000376836 PIK3CDO00329 1044 aa31.22■■■□□ 2.59
COMMD3-201ENST00000376836 NR3C2P08235 984 aa31.22■■■□□ 2.59
COMMD3-201ENST00000376836 IFNAR1P17181 557 aa31.22■■■□□ 2.59
COMMD3-201ENST00000376836 MNX1P50219 401 aaPredicted RBP31.22■■■□□ 2.59
COMMD3-201ENST00000376836 AK2P54819 239 aa31.22■■■□□ 2.59
COMMD3-201ENST00000376836 PFKFB3Q16875 520 aaPredicted RBP31.22■■■□□ 2.59
COMMD3-201ENST00000376836 DPF3Q92784 378 aa31.22■■■□□ 2.59
COMMD3-201ENST00000376836 LENG1Q96BZ8 264 aaPredicted RBP31.22■■■□□ 2.59
COMMD3-201ENST00000376836 SLC26A6Q9BXS9 759 aa31.22■■■□□ 2.59
COMMD3-201ENST00000376836 RNF26Q9BY78 433 aaPredicted RBP31.22■■■□□ 2.59
COMMD3-201ENST00000376836 WDR11Q9BZH6 1224 aa31.22■■■□□ 2.59
COMMD3-201ENST00000376836 PDGFCQ9NRA1 345 aa31.22■■■□□ 2.59
COMMD3-201ENST00000376836 LCTP09848 1927 aa31.21■■■□□ 2.59
COMMD3-201ENST00000376836 EIF3JO75822 258 aaKnown RBP31.21■■■□□ 2.59
COMMD3-201ENST00000376836 MYCLP12524 364 aaPredicted RBP31.21■■■□□ 2.59
COMMD3-201ENST00000376836 SCG2P13521 617 aa31.21■■■□□ 2.59
COMMD3-201ENST00000376836 SCFD2Q8WU76 684 aa31.21■■■□□ 2.59
COMMD3-201ENST00000376836 CCDC12Q8WUD4 166 aaPredicted RBP31.21■■■□□ 2.59
COMMD3-201ENST00000376836 PHKBQ93100 1093 aa31.21■■■□□ 2.59
COMMD3-201ENST00000376836 PDCD2LQ9BRP1 358 aa31.21■■■□□ 2.59
COMMD3-201ENST00000376836 GLT8D2Q9H1C3 349 aa31.21■■■□□ 2.59
COMMD3-201ENST00000376836 BARHL2Q9NY43 387 aa31.21■■■□□ 2.59
COMMD3-201ENST00000376836 SYNRGQ9UMZ2 1314 aa31.2■■■□□ 2.59
COMMD3-201ENST00000376836 C11orf97A0A1B0GVM6 126 aaPredicted RBP31.2■■■□□ 2.58
COMMD3-201ENST00000376836 C6orf222P0C671 652 aaPredicted RBP31.2■■■□□ 2.58
COMMD3-201ENST00000376836 CCND2P30279 289 aa31.2■■■□□ 2.58
COMMD3-201ENST00000376836 SSRP1Q08945 709 aaKnown RBP31.2■■■□□ 2.58
COMMD3-201ENST00000376836 USP17L6PQ6QN14 398 aa31.2■■■□□ 2.58
COMMD3-201ENST00000376836 TEX2Q8IWB9 1127 aa31.2■■■□□ 2.58
COMMD3-201ENST00000376836 SENP6Q9GZR1 1112 aaPredicted RBP31.2■■■□□ 2.58
COMMD3-201ENST00000376836 RBM47A0AV96 593 aaKnown RBP31.19■■■□□ 2.58
COMMD3-201ENST00000376836 CDKL5O76039 1030 aa31.19■■■□□ 2.58
COMMD3-201ENST00000376836 SMPD1P17405 629 aa31.19■■■□□ 2.58
COMMD3-201ENST00000376836 TTLL4Q14679 1199 aa31.19■■■□□ 2.58
COMMD3-201ENST00000376836 NTRK3Q16288 839 aa31.19■■■□□ 2.58
COMMD3-201ENST00000376836 TPCN1Q9ULQ1 816 aa31.19■■■□□ 2.58
COMMD3-201ENST00000376836 Q9Y3F1 56 aa31.19■■■□□ 2.58
COMMD3-201ENST00000376836 MCM3APO60318 1980 aa31.18■■■□□ 2.58
COMMD3-201ENST00000376836 SPDYE3A6NKU9 549 aa31.18■■■□□ 2.58
COMMD3-201ENST00000376836 MEIS2O14770 477 aa31.18■■■□□ 2.58
COMMD3-201ENST00000376836 ADCY7P51828 1080 aa31.18■■■□□ 2.58
COMMD3-201ENST00000376836 GJA9P57773 515 aa31.18■■■□□ 2.58
COMMD3-201ENST00000376836 PGM5Q15124 567 aa31.18■■■□□ 2.58
COMMD3-201ENST00000376836 DUSP28Q4G0W2 176 aa31.18■■■□□ 2.58
COMMD3-201ENST00000376836 SEPT14Q6ZU15 432 aa31.18■■■□□ 2.58
COMMD3-201ENST00000376836 TLK2Q86UE8 772 aa31.18■■■□□ 2.58
COMMD3-201ENST00000376836 EHMT1Q9H9B1 1298 aa31.18■■■□□ 2.58
COMMD3-201ENST00000376836 SMCO2A6NFE2 343 aa31.17■■■□□ 2.58
COMMD3-201ENST00000376836 STXBP3O00186 592 aa31.17■■■□□ 2.58
COMMD3-201ENST00000376836 NKRFO15226 690 aaKnown RBP eCLIP31.17■■■□□ 2.58
COMMD3-201ENST00000376836 DYNC1LI2O43237 492 aaPredicted RBP31.17■■■□□ 2.58
COMMD3-201ENST00000376836 ADAMTS4O75173 837 aa31.17■■■□□ 2.58
COMMD3-201ENST00000376836 COL6A1P12109 1028 aa31.17■■■□□ 2.58
COMMD3-201ENST00000376836 RBM25P49756 843 aaKnown RBP31.17■■■□□ 2.58
COMMD3-201ENST00000376836 PCSK9Q8NBP7 692 aaKnown RBP31.17■■■□□ 2.58
COMMD3-201ENST00000376836 TSEN34Q9BSV6 310 aaKnown RBP31.17■■■□□ 2.58
COMMD3-201ENST00000376836 UPF3AQ9H1J1 476 aaKnown RBP31.17■■■□□ 2.58
COMMD3-201ENST00000376836 RIC8AQ9NPQ8 531 aa31.17■■■□□ 2.58
COMMD3-201ENST00000376836 GNEQ9Y223 722 aaKnown RBP31.17■■■□□ 2.58
COMMD3-201ENST00000376836 FRMPD3Q5JV73 1810 aa31.17■■■□□ 2.58
COMMD3-201ENST00000376836 ADCY6O43306 1168 aa31.16■■■□□ 2.58
COMMD3-201ENST00000376836 PFKFB2O60825 505 aa31.16■■■□□ 2.58
COMMD3-201ENST00000376836 TXNP10599 105 aaKnown RBP31.16■■■□□ 2.58
COMMD3-201ENST00000376836 GNASQ5JWF2 1037 aa31.16■■■□□ 2.58
COMMD3-201ENST00000376836 VSIG10LQ86VR7 867 aa31.16■■■□□ 2.58
COMMD3-201ENST00000376836 ZEB2O60315 1214 aa31.15■■■□□ 2.58
COMMD3-201ENST00000376836 MOXD2PA6NHM9 499 aa31.14■■■□□ 2.58
COMMD3-201ENST00000376836 EVI5O60447 810 aa31.14■■■□□ 2.58
COMMD3-201ENST00000376836 STAM2O75886 525 aa31.14■■■□□ 2.58
COMMD3-201ENST00000376836 CST5P28325 142 aaPredicted RBP31.14■■■□□ 2.58
COMMD3-201ENST00000376836 SCRN1Q12765 414 aa31.14■■■□□ 2.58
COMMD3-201ENST00000376836 UBE2SQ16763 222 aa31.14■■■□□ 2.58
COMMD3-201ENST00000376836 KLHDC9Q8NEP7 349 aa31.14■■■□□ 2.58
COMMD3-201ENST00000376836 C6orf50Q9HD87 102 aa31.14■■■□□ 2.58
COMMD3-201ENST00000376836 PHF24Q9UPV7 400 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms