RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 PIK3CDO00329 1044 aa28.09■■■□□ 2.09
CTSA-203ENST00000372459 CRYGNQ8WXF5 182 aa28.09■■■□□ 2.09
CTSA-203ENST00000372459 PCDHA12Q9UN75 941 aa28.09■■■□□ 2.09
CTSA-203ENST00000372459 OPLAHO14841 1288 aa28.08■■■□□ 2.09
CTSA-203ENST00000372459 CTNND1O60716 968 aaKnown RBP28.08■■■□□ 2.09
CTSA-203ENST00000372459 GRB10Q13322 594 aa28.08■■■□□ 2.09
CTSA-203ENST00000372459 DHX8Q14562 1220 aaKnown RBP28.08■■■□□ 2.09
CTSA-203ENST00000372459 CCDC84Q86UT8 332 aaPredicted RBP28.08■■■□□ 2.09
CTSA-203ENST00000372459 SREBF1P36956 1147 aa28.08■■■□□ 2.09
CTSA-203ENST00000372459 STX17P56962 302 aa28.08■■■□□ 2.09
CTSA-203ENST00000372459 KMT5BQ4FZB7 885 aa28.08■■■□□ 2.09
CTSA-203ENST00000372459 SNX29Q8TEQ0 813 aa28.08■■■□□ 2.09
CTSA-203ENST00000372459 CCDC47Q96A33 483 aaKnown RBP28.08■■■□□ 2.09
CTSA-203ENST00000372459 P2RX7Q99572 595 aaKnown RBP28.08■■■□□ 2.09
CTSA-203ENST00000372459 C7orf25Q9BPX7 421 aa28.08■■■□□ 2.09
CTSA-203ENST00000372459 SAMSN1Q9NSI8 373 aaKnown RBP28.08■■■□□ 2.09
CTSA-203ENST00000372459 SPTLC3Q9NUV7 552 aa28.08■■■□□ 2.09
CTSA-203ENST00000372459 CTNND2Q9UQB3 1225 aa28.08■■■□□ 2.09
CTSA-203ENST00000372459 UQCRHLA0A096LP55 91 aa28.07■■■□□ 2.08
CTSA-203ENST00000372459 KLRC4O43908 158 aa28.07■■■□□ 2.08
CTSA-203ENST00000372459 UQCRHP07919 91 aa28.07■■■□□ 2.08
CTSA-203ENST00000372459 TAL1P17542 331 aaPredicted RBP28.07■■■□□ 2.08
CTSA-203ENST00000372459 CCDC174Q6PII3 467 aa28.07■■■□□ 2.08
CTSA-203ENST00000372459 KCNMB3Q9NPA1 279 aa28.07■■■□□ 2.08
CTSA-203ENST00000372459 RHOBTB3O94955 611 aa28.06■■■□□ 2.08
CTSA-203ENST00000372459 HSP90AA4PQ58FG1 418 aa28.06■■■□□ 2.08
CTSA-203ENST00000372459 SLFN12Q8IYM2 578 aa28.06■■■□□ 2.08
CTSA-203ENST00000372459 PNMA5Q96PV4 448 aa28.06■■■□□ 2.08
CTSA-203ENST00000372459 TRIM9Q9C026 710 aa28.06■■■□□ 2.08
CTSA-203ENST00000372459 RWDD2AQ9UIY3 292 aa28.06■■■□□ 2.08
CTSA-203ENST00000372459 PAK1Q13153 545 aa28.06■■■□□ 2.08
CTSA-203ENST00000372459 SV2BQ7L1I2 683 aa28.06■■■□□ 2.08
CTSA-203ENST00000372459 Q4G0T1 1027 aa28.05■■■□□ 2.08
CTSA-203ENST00000372459 DCAF15Q66K64 600 aa28.05■■■□□ 2.08
CTSA-203ENST00000372459 LPAR1Q92633 364 aa28.05■■■□□ 2.08
CTSA-203ENST00000372459 GDAQ9Y2T3 454 aa28.05■■■□□ 2.08
CTSA-203ENST00000372459 MRPL11Q9Y3B7 192 aaKnown RBP28.05■■■□□ 2.08
CTSA-203ENST00000372459 HOXA13P31271 388 aaPredicted RBP28.04■■■□□ 2.08
CTSA-203ENST00000372459 ARID5BQ14865 1188 aa28.04■■■□□ 2.08
CTSA-203ENST00000372459 APOBEC3FQ8IUX4 373 aaKnown RBP28.04■■■□□ 2.08
CTSA-203ENST00000372459 C17orf53Q8N3J3 647 aaPredicted RBP28.04■■■□□ 2.08
CTSA-203ENST00000372459 CCDC150Q8NCX0 1101 aa28.04■■■□□ 2.08
CTSA-203ENST00000372459 KIAA1683Q9H0B3 1180 aa28.04■■■□□ 2.08
CTSA-203ENST00000372459 DYNC1I1O14576 645 aa28.04■■■□□ 2.08
CTSA-203ENST00000372459 TBX3O15119 743 aa28.04■■■□□ 2.08
CTSA-203ENST00000372459 WDR46O15213 610 aaKnown RBP28.04■■■□□ 2.08
CTSA-203ENST00000372459 TPD52L1Q16890 204 aaPredicted RBP28.04■■■□□ 2.08
CTSA-203ENST00000372459 NBPF12Q5TAG4 269 aaPredicted RBP28.04■■■□□ 2.08
CTSA-203ENST00000372459 VSTM4Q8IW00 320 aa28.04■■■□□ 2.08
CTSA-203ENST00000372459 LARP4BQ92615 738 aaKnown RBP28.04■■■□□ 2.08
CTSA-203ENST00000372459 HOOK2Q96ED9 719 aa28.04■■■□□ 2.08
CTSA-203ENST00000372459 GTPBP4Q9BZE4 634 aaKnown RBP28.04■■■□□ 2.08
CTSA-203ENST00000372459 BLOC1S4Q9NUP1 217 aa28.04■■■□□ 2.08
CTSA-203ENST00000372459 PRCPP42785 496 aa28.03■■■□□ 2.08
CTSA-203ENST00000372459 TMEM119Q4V9L6 283 aa28.03■■■□□ 2.08
CTSA-203ENST00000372459 ARHGAP27Q6ZUM4 889 aa28.03■■■□□ 2.08
CTSA-203ENST00000372459 NELFBQ8WX92 580 aa28.03■■■□□ 2.08
CTSA-203ENST00000372459 FBXO28Q9NVF7 368 aa28.03■■■□□ 2.08
CTSA-203ENST00000372459 GCOM1H8Y6P7 765 aaPredicted RBP28.02■■■□□ 2.08
CTSA-203ENST00000372459 POLR2MP0CAP2 368 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 CIITAP33076 1130 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 ASIC1P78348 528 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 STIM1Q13586 685 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 PRR16Q569H4 304 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 CDKAL1Q5VV42 579 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 ADSSL1Q8N142 457 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 GIMAP8Q8ND71 665 aaPredicted RBP28.02■■■□□ 2.08
CTSA-203ENST00000372459 GJA10Q969M2 543 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 SPON1Q9HCB6 807 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 ABCB11O95342 1321 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 KDM3AQ9Y4C1 1321 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 SLC26A4O43511 780 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 CFBP00751 764 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 CYP3A4P08684 503 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 LMNB1P20700 586 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 SAMD1Q6SPF0 538 aaPredicted RBP28.02■■■□□ 2.08
CTSA-203ENST00000372459 RAD54LQ92698 747 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 NUDT12Q9BQG2 462 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 LRRC27Q9C0I9 530 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 EXOC1Q9NV70 894 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 GPRC5DQ9NZD1 345 aa28.02■■■□□ 2.08
CTSA-203ENST00000372459 ANGEL2Q5VTE6 544 aaKnown RBP28.01■■■□□ 2.07
CTSA-203ENST00000372459 GPC2Q8N158 579 aa28.01■■■□□ 2.07
CTSA-203ENST00000372459 ETNPPLQ8TBG4 499 aa28.01■■■□□ 2.07
CTSA-203ENST00000372459 NT5C3AQ9H0P0 336 aa28.01■■■□□ 2.07
CTSA-203ENST00000372459 INTS13Q9NVM9 706 aa28.01■■■□□ 2.07
CTSA-203ENST00000372459 MCM6Q14566 821 aa28■■■□□ 2.07
CTSA-203ENST00000372459 HYIQ5T013 277 aa28■■■□□ 2.07
CTSA-203ENST00000372459 FCHSD1Q86WN1 690 aa28■■■□□ 2.07
CTSA-203ENST00000372459 PRIMPOLQ96LW4 560 aa28■■■□□ 2.07
CTSA-203ENST00000372459 CTAGE1Q96RT6 745 aa28■■■□□ 2.07
CTSA-203ENST00000372459 SMCHD1A6NHR9 2005 aa28■■■□□ 2.07
CTSA-203ENST00000372459 INPP5BP32019 993 aa28■■■□□ 2.07
CTSA-203ENST00000372459 PDE4DQ08499 809 aa28■■■□□ 2.07
CTSA-203ENST00000372459 LDHDQ86WU2 507 aa28■■■□□ 2.07
CTSA-203ENST00000372459 PRPF38AQ8NAV1 312 aaKnown RBP28■■■□□ 2.07
CTSA-203ENST00000372459 PDCL3Q9H2J4 239 aa28■■■□□ 2.07
CTSA-203ENST00000372459 MAPK8IP1Q9UQF2 711 aa28■■■□□ 2.07
CTSA-203ENST00000372459 DICER1Q9UPY3 1922 aaKnown RBP28■■■□□ 2.07
CTSA-203ENST00000372459 FAM86B1E9PN63 330 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms