RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 IRF6O14896 467 aa29.72■■■□□ 2.35
ATPAF1-202ENST00000371937 POTEIP0CG38 1075 aa29.72■■■□□ 2.35
ATPAF1-202ENST00000371937 POTEJP0CG39 1038 aa29.72■■■□□ 2.35
ATPAF1-202ENST00000371937 CIITAP33076 1130 aa29.72■■■□□ 2.35
ATPAF1-202ENST00000371937 TECP42680 631 aa29.72■■■□□ 2.35
ATPAF1-202ENST00000371937 GHRHRQ02643 423 aa29.72■■■□□ 2.35
ATPAF1-202ENST00000371937 PDIA5Q14554 519 aa29.72■■■□□ 2.35
ATPAF1-202ENST00000371937 ANO6Q4KMQ2 910 aa29.72■■■□□ 2.35
ATPAF1-202ENST00000371937 PROCA1Q8NCQ7 364 aaPredicted RBP29.72■■■□□ 2.35
ATPAF1-202ENST00000371937 ERCC4Q92889 916 aaPredicted RBP29.72■■■□□ 2.35
ATPAF1-202ENST00000371937 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.71■■■□□ 2.35
ATPAF1-202ENST00000371937 DCAF8L1A6NGE4 600 aa29.71■■■□□ 2.35
ATPAF1-202ENST00000371937 MDM2Q00987 491 aaPredicted RBP29.71■■■□□ 2.35
ATPAF1-202ENST00000371937 PPIL2Q13356 520 aa29.71■■■□□ 2.35
ATPAF1-202ENST00000371937 POSTNQ15063 836 aa29.71■■■□□ 2.35
ATPAF1-202ENST00000371937 CCDC39Q9UFE4 941 aa29.71■■■□□ 2.35
ATPAF1-202ENST00000371937 TUBE1Q9UJT0 475 aa29.71■■■□□ 2.35
ATPAF1-202ENST00000371937 RLFQ13129 1914 aa29.71■■■□□ 2.35
ATPAF1-202ENST00000371937 A0A0G2JLL6 359 aaPredicted RBP29.71■■■□□ 2.35
ATPAF1-202ENST00000371937 PNOCQ13519 176 aa29.71■■■□□ 2.35
ATPAF1-202ENST00000371937 UVSSAQ2YD98 709 aa29.71■■■□□ 2.35
ATPAF1-202ENST00000371937 Q4G0T1 1027 aa29.71■■■□□ 2.35
ATPAF1-202ENST00000371937 LDLRAD1Q5T700 205 aa29.71■■■□□ 2.35
ATPAF1-202ENST00000371937 PRRT2Q7Z6L0 340 aaPredicted RBP29.71■■■□□ 2.35
ATPAF1-202ENST00000371937 FAM200AQ8TCP9 573 aa29.71■■■□□ 2.35
ATPAF1-202ENST00000371937 ATP2A1O14983 1001 aa29.7■■■□□ 2.34
ATPAF1-202ENST00000371937 REPS2Q8NFH8 660 aa29.7■■■□□ 2.34
ATPAF1-202ENST00000371937 ANP32BQ92688 251 aaKnown RBP29.7■■■□□ 2.34
ATPAF1-202ENST00000371937 KCNH4Q9UQ05 1017 aa29.7■■■□□ 2.34
ATPAF1-202ENST00000371937 RABGAP1Q9Y3P9 1069 aa29.7■■■□□ 2.34
ATPAF1-202ENST00000371937 PTPRFP10586 1907 aa29.69■■■□□ 2.34
ATPAF1-202ENST00000371937 NFIBO00712 420 aa29.69■■■□□ 2.34
ATPAF1-202ENST00000371937 CDC25AP30304 524 aa29.69■■■□□ 2.34
ATPAF1-202ENST00000371937 E2F4Q16254 413 aa29.69■■■□□ 2.34
ATPAF1-202ENST00000371937 SLFN12Q8IYM2 578 aa29.69■■■□□ 2.34
ATPAF1-202ENST00000371937 RASSF8Q8NHQ8 419 aa29.69■■■□□ 2.34
ATPAF1-202ENST00000371937 WNK4Q96J92 1243 aa29.69■■■□□ 2.34
ATPAF1-202ENST00000371937 TRERF1Q96PN7 1200 aa29.69■■■□□ 2.34
ATPAF1-202ENST00000371937 TTC12Q9H892 705 aaPredicted RBP29.69■■■□□ 2.34
ATPAF1-202ENST00000371937 DISC1Q9NRI5 854 aa29.69■■■□□ 2.34
ATPAF1-202ENST00000371937 TBX3O15119 743 aa29.68■■■□□ 2.34
ATPAF1-202ENST00000371937 ZNF76P36508 570 aa29.68■■■□□ 2.34
ATPAF1-202ENST00000371937 HAS1Q92839 578 aa29.68■■■□□ 2.34
ATPAF1-202ENST00000371937 KCNMB3Q9NPA1 279 aa29.68■■■□□ 2.34
ATPAF1-202ENST00000371937 HOMER2Q9NSB8 354 aa29.68■■■□□ 2.34
ATPAF1-202ENST00000371937 LRWD1Q9UFC0 647 aa29.68■■■□□ 2.34
ATPAF1-202ENST00000371937 PP2D1A8MPX8 630 aa29.68■■■□□ 2.34
ATPAF1-202ENST00000371937 HOXA7P31268 230 aaPredicted RBP29.68■■■□□ 2.34
ATPAF1-202ENST00000371937 CABP7Q86V35 215 aa29.68■■■□□ 2.34
ATPAF1-202ENST00000371937 OPTNQ96CV9 577 aa29.68■■■□□ 2.34
ATPAF1-202ENST00000371937 PCDHA12Q9UN75 941 aa29.68■■■□□ 2.34
ATPAF1-202ENST00000371937 SPDYE16A6NNV3 312 aaPredicted RBP29.67■■■□□ 2.34
ATPAF1-202ENST00000371937 TRAF5O00463 557 aa29.67■■■□□ 2.34
ATPAF1-202ENST00000371937 KARSQ15046 597 aaKnown RBP29.67■■■□□ 2.34
ATPAF1-202ENST00000371937 PRR16Q569H4 304 aa29.67■■■□□ 2.34
ATPAF1-202ENST00000371937 TREML2Q5T2D2 321 aa29.67■■■□□ 2.34
ATPAF1-202ENST00000371937 RRAGBQ5VZM2 374 aa29.67■■■□□ 2.34
ATPAF1-202ENST00000371937 GADL1Q6ZQY3 521 aa29.67■■■□□ 2.34
ATPAF1-202ENST00000371937 DNAJC25Q9H1X3 360 aa29.67■■■□□ 2.34
ATPAF1-202ENST00000371937 ZNF214Q9UL59 606 aaPredicted RBP29.67■■■□□ 2.34
ATPAF1-202ENST00000371937 STAT6P42226 847 aa29.66■■■□□ 2.34
ATPAF1-202ENST00000371937 MUM1L1Q5H9M0 696 aa29.66■■■□□ 2.34
ATPAF1-202ENST00000371937 SNRNP48Q6IEG0 339 aaKnown RBP29.66■■■□□ 2.34
ATPAF1-202ENST00000371937 SH3RF1Q7Z6J0 888 aa29.66■■■□□ 2.34
ATPAF1-202ENST00000371937 PAGE5Q96GU1 130 aa29.66■■■□□ 2.34
ATPAF1-202ENST00000371937 TEX13BQ9BXU2 312 aa29.66■■■□□ 2.34
ATPAF1-202ENST00000371937 NAT10Q9H0A0 1025 aaKnown RBP29.66■■■□□ 2.34
ATPAF1-202ENST00000371937 PCDHA5Q9Y5H7 936 aa29.66■■■□□ 2.34
ATPAF1-202ENST00000371937 FOXN1O15353 648 aa29.66■■■□□ 2.34
ATPAF1-202ENST00000371937 ZNF165P49910 485 aa29.66■■■□□ 2.34
ATPAF1-202ENST00000371937 NLRP12P59046 1061 aa29.66■■■□□ 2.34
ATPAF1-202ENST00000371937 FKBP1BP68106 108 aa29.66■■■□□ 2.34
ATPAF1-202ENST00000371937 TKFCQ3LXA3 575 aa29.66■■■□□ 2.34
ATPAF1-202ENST00000371937 ZNF408Q9H9D4 720 aa29.66■■■□□ 2.34
ATPAF1-202ENST00000371937 FAM86B1E9PN63 330 aa29.65■■■□□ 2.34
ATPAF1-202ENST00000371937 SMC2O95347 1197 aa29.65■■■□□ 2.34
ATPAF1-202ENST00000371937 FAM86B2P0C5J1 330 aa29.65■■■□□ 2.34
ATPAF1-202ENST00000371937 TMEM132BQ14DG7 1078 aa29.65■■■□□ 2.34
ATPAF1-202ENST00000371937 PDXDC2PQ6P474 469 aa29.65■■■□□ 2.34
ATPAF1-202ENST00000371937 SLC10A4Q96EP9 437 aa29.65■■■□□ 2.34
ATPAF1-202ENST00000371937 FAM20AQ96MK3 541 aa29.65■■■□□ 2.34
ATPAF1-202ENST00000371937 CUEDC2Q9H467 287 aa29.65■■■□□ 2.34
ATPAF1-202ENST00000371937 RNF146Q9NTX7 359 aa29.65■■■□□ 2.34
ATPAF1-202ENST00000371937 LOC285556D6RIA3 1793 aa29.65■■■□□ 2.34
ATPAF1-202ENST00000371937 NT5DC1Q5TFE4 455 aa29.64■■■□□ 2.34
ATPAF1-202ENST00000371937 FASTKD5Q7L8L6 764 aaKnown RBP29.64■■■□□ 2.34
ATPAF1-202ENST00000371937 MB21D1Q8N884 522 aa29.64■■■□□ 2.34
ATPAF1-202ENST00000371937 SMARCE1Q969G3 411 aa29.64■■■□□ 2.34
ATPAF1-202ENST00000371937 CALML4Q96GE6 196 aa29.64■■■□□ 2.34
ATPAF1-202ENST00000371937 MAF1Q9H063 256 aa29.64■■■□□ 2.34
ATPAF1-202ENST00000371937 ETNPPLQ8TBG4 499 aa29.64■■■□□ 2.33
ATPAF1-202ENST00000371937 LENG9Q96B70 501 aa29.64■■■□□ 2.33
ATPAF1-202ENST00000371937 BIN1O00499 593 aa29.63■■■□□ 2.33
ATPAF1-202ENST00000371937 AFMP43652 599 aa29.63■■■□□ 2.33
ATPAF1-202ENST00000371937 RNF207Q6ZRF8 634 aa29.63■■■□□ 2.33
ATPAF1-202ENST00000371937 GRAMD1CQ8IYS0 662 aa29.63■■■□□ 2.33
ATPAF1-202ENST00000371937 CBX8Q9HC52 389 aa29.63■■■□□ 2.33
ATPAF1-202ENST00000371937 COL11A1P12107 1806 aaPredicted RBP29.63■■■□□ 2.33
ATPAF1-202ENST00000371937 STAT3P40763 770 aa29.62■■■□□ 2.33
ATPAF1-202ENST00000371937 RPS6P62753 249 aaKnown RBP29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms