RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 ARHGAP4P98171 946 aa12.47□□□□□ -0.41
BRCC3-204ENST00000369462 STK38Q15208 465 aa12.47□□□□□ -0.41
BRCC3-204ENST00000369462 SHCBP1Q8NEM2 672 aa12.47□□□□□ -0.41
BRCC3-204ENST00000369462 LEO1Q8WVC0 666 aaPredicted RBP12.47□□□□□ -0.41
BRCC3-204ENST00000369462 TAAR1Q96RJ0 339 aa12.47□□□□□ -0.41
BRCC3-204ENST00000369462 ADGRA2Q96PE1 1338 aa12.46□□□□□ -0.41
BRCC3-204ENST00000369462 EDIL3O43854 480 aa12.46□□□□□ -0.41
BRCC3-204ENST00000369462 ECM2O94769 699 aaPredicted RBP12.46□□□□□ -0.41
BRCC3-204ENST00000369462 BCRP11274 1271 aa12.46□□□□□ -0.41
BRCC3-204ENST00000369462 MCM4P33991 863 aa12.46□□□□□ -0.41
BRCC3-204ENST00000369462 MAP2K2P36507 400 aa12.46□□□□□ -0.41
BRCC3-204ENST00000369462 SREBF1P36956 1147 aa12.46□□□□□ -0.41
BRCC3-204ENST00000369462 NASPP49321 788 aaPredicted RBP12.46□□□□□ -0.41
BRCC3-204ENST00000369462 REM2Q8IYK8 340 aaPredicted RBP12.46□□□□□ -0.41
BRCC3-204ENST00000369462 LINC00301Q8NCQ3 95 aa12.46□□□□□ -0.41
BRCC3-204ENST00000369462 RMDN3Q96TC7 470 aa12.46□□□□□ -0.41
BRCC3-204ENST00000369462 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.46□□□□□ -0.41
BRCC3-204ENST00000369462 GOLGA6L22H0YM25 854 aa12.46□□□□□ -0.42
BRCC3-204ENST00000369462 PRPF40AO75400 957 aaKnown RBP12.46□□□□□ -0.42
BRCC3-204ENST00000369462 KCTD2Q14681 263 aa12.46□□□□□ -0.42
BRCC3-204ENST00000369462 C17orf99Q6UX52 265 aa12.46□□□□□ -0.42
BRCC3-204ENST00000369462 RCOR1Q9UKL0 485 aa12.46□□□□□ -0.42
BRCC3-204ENST00000369462 PFASO15067 1338 aa12.46□□□□□ -0.42
BRCC3-204ENST00000369462 YEATS4O95619 227 aa12.45□□□□□ -0.42
BRCC3-204ENST00000369462 FCER1AP12319 257 aa12.45□□□□□ -0.42
BRCC3-204ENST00000369462 EIF2AK2P19525 551 aaKnown RBP12.45□□□□□ -0.42
BRCC3-204ENST00000369462 USP11P51784 963 aa12.45□□□□□ -0.42
BRCC3-204ENST00000369462 CNTN2Q02246 1040 aa12.45□□□□□ -0.42
BRCC3-204ENST00000369462 SLC39A14Q15043 492 aa12.45□□□□□ -0.42
BRCC3-204ENST00000369462 PTPAQ15257 358 aa12.45□□□□□ -0.42
BRCC3-204ENST00000369462 CRYGNQ8WXF5 182 aa12.45□□□□□ -0.42
BRCC3-204ENST00000369462 MMP19Q99542 508 aa12.45□□□□□ -0.42
BRCC3-204ENST00000369462 EHMT1Q9H9B1 1298 aa12.45□□□□□ -0.42
BRCC3-204ENST00000369462 TDP2O95551 362 aa12.45□□□□□ -0.42
BRCC3-204ENST00000369462 PGK2P07205 417 aa12.45□□□□□ -0.42
BRCC3-204ENST00000369462 MARCKSP29966 332 aaPredicted RBP12.45□□□□□ -0.42
BRCC3-204ENST00000369462 PTGDRQ13258 359 aa12.45□□□□□ -0.42
BRCC3-204ENST00000369462 NFKBIBQ15653 356 aa12.45□□□□□ -0.42
BRCC3-204ENST00000369462 MAF1Q9H063 256 aa12.45□□□□□ -0.42
BRCC3-204ENST00000369462 CEP131Q9UPN4 1083 aa12.45□□□□□ -0.42
BRCC3-204ENST00000369462 MRVI1Q9Y6F6 885 aa12.45□□□□□ -0.42
BRCC3-204ENST00000369462 POTEB2H3BUK9 544 aa12.44□□□□□ -0.42
BRCC3-204ENST00000369462 SPTLC2O15270 562 aa12.44□□□□□ -0.42
BRCC3-204ENST00000369462 C1QTNF8P60827 252 aa12.44□□□□□ -0.42
BRCC3-204ENST00000369462 ARHGEF16Q5VV41 709 aa12.44□□□□□ -0.42
BRCC3-204ENST00000369462 ZFP91Q96JP5 570 aaPredicted RBP12.44□□□□□ -0.42
BRCC3-204ENST00000369462 PXMP2Q9NR77 195 aa12.44□□□□□ -0.42
BRCC3-204ENST00000369462 IVNS1ABPQ9Y6Y0 642 aa12.44□□□□□ -0.42
BRCC3-204ENST00000369462 TRPA1O75762 1119 aa12.44□□□□□ -0.42
BRCC3-204ENST00000369462 HSPA6P17066 643 aa12.44□□□□□ -0.42
BRCC3-204ENST00000369462 ZNF76P36508 570 aa12.44□□□□□ -0.42
BRCC3-204ENST00000369462 ME1P48163 572 aa12.44□□□□□ -0.42
BRCC3-204ENST00000369462 CSPP1Q1MSJ5 1256 aa12.44□□□□□ -0.42
BRCC3-204ENST00000369462 IL31RAQ8NI17 732 aa12.44□□□□□ -0.42
BRCC3-204ENST00000369462 KCNG4Q8TDN1 519 aa12.44□□□□□ -0.42
BRCC3-204ENST00000369462 NSUN6Q8TEA1 469 aaKnown RBP12.44□□□□□ -0.42
BRCC3-204ENST00000369462 MYH15Q9Y2K3 1946 aa12.44□□□□□ -0.42
BRCC3-204ENST00000369462 MYH7BA7E2Y1 1941 aa12.44□□□□□ -0.42
BRCC3-204ENST00000369462 NEMFO60524 1076 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 MAPK4P31152 587 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 PPP4R3AQ6IN85 833 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.43□□□□□ -0.42
BRCC3-204ENST00000369462 GPR142Q7Z601 462 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 CYP2W1Q8TAV3 490 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 PDCD2LQ9BRP1 358 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 RPTORQ8N122 1335 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 FAM86B1E9PN63 330 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 STRNO43815 780 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 SLC37A4O43826 429 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 TBC1D8O95759 1140 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 BMP15O95972 392 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 CYP3A4P08684 503 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 FAM86B2P0C5J1 330 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 MYCLP12524 364 aaPredicted RBP12.43□□□□□ -0.42
BRCC3-204ENST00000369462 PGM5Q15124 567 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 FAM133AQ8N9E0 248 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 TMEM60Q9H2L4 133 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 DDX25Q9UHL0 483 aaKnown RBP12.43□□□□□ -0.42
BRCC3-204ENST00000369462 DDX49Q9Y6V7 483 aaKnown RBP12.43□□□□□ -0.42
BRCC3-204ENST00000369462 ELP1O95163 1332 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 GCFC2P16383 781 aaKnown RBP12.43□□□□□ -0.42
BRCC3-204ENST00000369462 ADORA2AP29274 412 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 PRR16Q569H4 304 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 POTEDQ86YR6 584 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 TMEM87AQ8NBN3 555 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 LMBRD1Q9NUN5 540 aa12.43□□□□□ -0.42
BRCC3-204ENST00000369462 ASTN1O14525 1302 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 CYP3A7-CYP3A51PA0A087WV96 503 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 NR3C2P08235 984 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 CYP3A7P24462 503 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 CIITAP33076 1130 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 ATP2C1P98194 919 aaPredicted RBP12.42□□□□□ -0.42
BRCC3-204ENST00000369462 PCNX4Q63HM2 1172 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 PLEKHH3Q7Z736 793 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 C4orf32Q8N8J7 132 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 JMYQ8N9B5 988 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 DNERQ8NFT8 737 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 UIMC1Q96RL1 719 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 NAP1L4Q99733 375 aaKnown RBP12.42□□□□□ -0.42
BRCC3-204ENST00000369462 RNF186Q9NXI6 227 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms