RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SLC38A10Q9HBR0 1119 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 MRPL11Q9Y3B7 192 aaKnown RBP13.69□□□□□ -0.22
USF1-203ENST00000368021 PARP14Q460N5 1801 aa13.69□□□□□ -0.22
USF1-203ENST00000368021 HTTP42858 3142 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 SMCHD1A6NHR9 2005 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 BRCA2P51587 3418 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 ABCB11O95342 1321 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 USP17L15C9J2P7 530 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 USP17L13C9JLJ4 530 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 USP17L11C9JVI0 530 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 USP17L18D6R9N7 530 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 USP17L22D6RA61 530 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 USP17L17D6RBQ6 530 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 USP17L19D6RCP7 530 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 USP17L20D6RJB6 530 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 OPLAHO14841 1288 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 FLOT1O75955 427 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 ZNF202O95125 648 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 SYKP43405 635 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 USP17L24Q0WX57 530 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 CRHR2Q13324 411 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 MOGSQ13724 837 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 TAF1CQ15572 869 aaPredicted RBP13.68□□□□□ -0.22
USF1-203ENST00000368021 LETM2Q2VYF4 491 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 PPP4R3AQ6IN85 833 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 USP17L6PQ6QN14 398 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 GAS2L3Q86XJ1 694 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 NAP1L4Q99733 375 aaKnown RBP13.68□□□□□ -0.22
USF1-203ENST00000368021 CSRNP2Q9H175 543 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 FAM13BQ9NYF5 915 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 TMOD4Q9NZQ9 345 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 PTPRFP10586 1907 aa13.68□□□□□ -0.22
USF1-203ENST00000368021 PDHXO00330 501 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 CCNT1O60563 726 aaKnown RBP13.67□□□□□ -0.22
USF1-203ENST00000368021 ALDH1A1P00352 501 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 GCFC2P16383 781 aaKnown RBP13.67□□□□□ -0.22
USF1-203ENST00000368021 GRIN1Q05586 938 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 CCDC173Q0VFZ6 552 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 TREML2Q5T2D2 321 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 CCDC174Q6PII3 467 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 SAGE1Q9NXZ1 904 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 KCNH3Q9ULD8 1083 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 MRVI1Q9Y6F6 885 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 MYH7BA7E2Y1 1941 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 RLFQ13129 1914 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 ZNF536O15090 1300 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 MYPNQ86TC9 1320 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 NEMFO60524 1076 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 ECM2O94769 699 aaPredicted RBP13.67□□□□□ -0.22
USF1-203ENST00000368021 CYP2C8P10632 490 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 LONP1P36776 959 aaKnown RBP13.67□□□□□ -0.22
USF1-203ENST00000368021 USP11P51784 963 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 CAMK4Q16566 473 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 GPAT2Q6NUI2 795 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 FASTKD5Q7L8L6 764 aaKnown RBP13.67□□□□□ -0.22
USF1-203ENST00000368021 ELOA2Q8IYF1 753 aaPredicted RBP13.67□□□□□ -0.22
USF1-203ENST00000368021 ANO3Q9BYT9 981 aa13.67□□□□□ -0.22
USF1-203ENST00000368021 VWA3AA6NCI4 1184 aa13.66□□□□□ -0.22
USF1-203ENST00000368021 SPDYE3A6NKU9 549 aa13.66□□□□□ -0.22
USF1-203ENST00000368021 EDIL3O43854 480 aa13.66□□□□□ -0.22
USF1-203ENST00000368021 COL13A1Q5TAT6 717 aaPredicted RBP13.66□□□□□ -0.22
USF1-203ENST00000368021 MOXD1Q6UVY6 613 aa13.66□□□□□ -0.22
USF1-203ENST00000368021 DTHD1Q6ZMT9 781 aa13.66□□□□□ -0.22
USF1-203ENST00000368021 CRYGNQ8WXF5 182 aa13.66□□□□□ -0.22
USF1-203ENST00000368021 FUCA2Q9BTY2 467 aa13.66□□□□□ -0.22
USF1-203ENST00000368021 CCPG1Q9ULG6 757 aa13.66□□□□□ -0.22
USF1-203ENST00000368021 ADAMTS5Q9UNA0 930 aa13.66□□□□□ -0.22
USF1-203ENST00000368021 VWA5AO00534 786 aa13.65□□□□□ -0.22
USF1-203ENST00000368021 ZBED4O75132 1171 aa13.65□□□□□ -0.22
USF1-203ENST00000368021 OR52Z1P0C646 297 aa13.65□□□□□ -0.22
USF1-203ENST00000368021 OAZ1P54368 228 aa13.65□□□□□ -0.22
USF1-203ENST00000368021 GHRHRQ02643 423 aa13.65□□□□□ -0.22
USF1-203ENST00000368021 COG2Q14746 738 aa13.65□□□□□ -0.22
USF1-203ENST00000368021 CATSPERGQ6ZRH7 1159 aa13.65□□□□□ -0.22
USF1-203ENST00000368021 SAMD3Q8N6K7 520 aa13.65□□□□□ -0.22
USF1-203ENST00000368021 SDF4Q9BRK5 362 aa13.65□□□□□ -0.22
USF1-203ENST00000368021 TMEM60Q9H2L4 133 aa13.65□□□□□ -0.22
USF1-203ENST00000368021 TSPY26PQ9H489 355 aa13.65□□□□□ -0.22
USF1-203ENST00000368021 CASP8AP2Q9UKL3 1982 aa13.65□□□□□ -0.22
USF1-203ENST00000368021 CYP3A7-CYP3A51PA0A087WV96 503 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 GCOM1H8Y6P7 765 aaPredicted RBP13.64□□□□□ -0.23
USF1-203ENST00000368021 POLR2MP0CAP2 368 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 CCDC192P0DO97 292 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 CYP3A7P24462 503 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 DSG3P32926 999 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 SREBF1P36956 1147 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 IL17AQ16552 155 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 SPECC1Q5M775 1068 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
USF1-203ENST00000368021 ANKRD23Q86SG2 305 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 PROCA1Q8NCQ7 364 aaPredicted RBP13.64□□□□□ -0.23
USF1-203ENST00000368021 ZNF296Q8WUU4 475 aaPredicted RBP13.64□□□□□ -0.23
USF1-203ENST00000368021 AK8Q96MA6 479 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 PYM1Q9BRP8 204 aaKnown RBP13.64□□□□□ -0.23
USF1-203ENST00000368021 ZFYVE28Q9HCC9 887 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 MAP3K20Q9NYL2 800 aaKnown RBP13.64□□□□□ -0.23
USF1-203ENST00000368021 LOC285556D6RIA3 1793 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 GPR25O00155 361 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 ATP2A1O14983 1001 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 ZSCAN30Q86W11 494 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms