RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 CTSWP56202 376 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 ARHGAP44Q17R89 818 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 NEK8Q86SG6 692 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 USP37Q86T82 979 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.49■□□□□ 0.391e-10■■□□□ 12.4
CLSTN1-201ENST00000361311 NEK9Q8TD19 979 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 C8orf37Q96NL8 207 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 ATG3Q9NT62 314 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 PCDH11XQ9BZA7 1347 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 PCDH11YQ9BZA8 1340 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 PRPF3O43395 683 aaKnown RBP17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 MAGOHP61326 146 aaKnown RBP17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 FOXR1Q6PIV2 292 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 KRT26Q7Z3Y9 468 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 PNMA1Q8ND90 353 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 MAGOHBQ96A72 148 aaKnown RBP17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 RUNDC3BQ96NL0 473 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 DISC1Q9NRI5 854 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 KCND1Q9NSA2 647 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 BIN2Q9UBW5 565 aaPredicted RBP17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 LIMA1Q9UHB6 759 aaKnown RBP17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 ECM2O94769 699 aaPredicted RBP17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 PCCAP05165 728 aaPredicted RBP17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 IL2RBP14784 551 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 ADAM9Q13443 819 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 RASIP1Q5U651 963 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 EHMT1Q9H9B1 1298 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 PALMO75781 387 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 LSP1P33241 339 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 MDH1P40925 334 aaKnown RBP17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 PPP2R2AP63151 447 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 FKBP3Q00688 224 aaKnown RBP17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 SPDL1Q96EA4 605 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 LZTS2Q9BRK4 669 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 DNAJC10Q8IXB1 793 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 FAM133AQ8N9E0 248 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 CAPN11Q9UMQ6 739 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 BZW2Q9Y6E2 419 aaKnown RBP17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 ITIH6Q6UXX5 1313 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 KRT14P02533 472 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 LDHBP07195 334 aaKnown RBP17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 MMEP08473 750 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 ADCY7P51828 1080 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 DRP2Q13474 957 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 CCDC13Q8IYE1 715 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 ZBTB38Q8NAP3 1195 aaPredicted RBP17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 NAP1L4Q99733 375 aaKnown RBP17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 GPCPD1Q9NPB8 672 aa17.48■□□□□ 0.39
CLSTN1-201ENST00000361311 ADGRB3O60242 1522 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 A0A1W2PQC6 194 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 SERPING1P05155 500 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 LRRC41Q15345 812 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 TEX2Q8IWB9 1127 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 ARMC2Q8NEN0 867 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 GREM2Q9H772 168 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 SOS2Q07890 1332 aaPredicted RBP17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 PSMD14O00487 310 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 ATP2A2P16615 1042 aaKnown RBP17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 VPS41P49754 854 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 BCAMP50895 628 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 ARL6IP4Q66PJ3 421 aaKnown RBP17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 P3H4Q92791 437 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 NT5C3AQ9H0P0 336 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 DNAJC5Q9H3Z4 198 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 SAP30BPQ9UHR5 308 aaKnown RBP17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 ROBO2Q9HCK4 1378 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 HLA-DOAP06340 250 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 PHLDB3Q6NSJ2 640 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 USP49Q70CQ1 688 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 PSMD1Q99460 953 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 LY9Q9HBG7 655 aa17.47■□□□□ 0.39
CLSTN1-201ENST00000361311 TMEM2Q9UHN6 1383 aa17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 AK8Q96MA6 479 aa17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 STRBPQ96SI9 672 aaKnown RBP17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 ORAI2Q96SN7 254 aa17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 PANK4Q9NVE7 773 aa17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 TROVE2P10155 538 aaKnown RBP eCLIP17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 EXOC3L4Q17RC7 722 aa17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 GALNT17Q6IS24 598 aa17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 KSR1Q8IVT5 923 aa17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 YIPF3Q9GZM5 350 aa17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 RAB21Q9UL25 225 aa17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 LAD1O00515 517 aa17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 THAP12O43422 761 aa17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 PLCG1P19174 1290 aa17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 SEC24CP53992 1094 aa17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 GPBP1Q86WP2 473 aa17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 LARP4BQ92615 738 aaKnown RBP17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 THOC1Q96FV9 657 aaKnown RBP17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 NLRP3Q96P20 1036 aa17.46■□□□□ 0.39
CLSTN1-201ENST00000361311 GCNT3O95395 438 aa17.46■□□□□ 0.38
CLSTN1-201ENST00000361311 PIH1D3Q9NQM4 214 aaKnown RBP17.46■□□□□ 0.38
CLSTN1-201ENST00000361311 HAUS2Q9NVX0 235 aa17.46■□□□□ 0.38
CLSTN1-201ENST00000361311 NEDD4P46934 1319 aa17.46■□□□□ 0.38
CLSTN1-201ENST00000361311 CCDC188H7C350 402 aa17.45■□□□□ 0.38
CLSTN1-201ENST00000361311 TULP2O00295 520 aa17.45■□□□□ 0.38
CLSTN1-201ENST00000361311 PICALMQ13492 652 aa17.45■□□□□ 0.38
CLSTN1-201ENST00000361311 PHLDB2Q86SQ0 1253 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms