RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 NGLY1Q96IV0 654 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 TRIM45Q9H8W5 580 aaPredicted RBP10.06□□□□□ -0.8
VPS13A-203ENST00000360280 BIN2Q9UBW5 565 aaPredicted RBP10.06□□□□□ -0.8
VPS13A-203ENST00000360280 TRPM2O94759 1503 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 TEX9Q8N6V9 391 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 DYDC2Q96IM9 177 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 TRIM8Q9BZR9 551 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 CDC23Q9UJX2 597 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 H7C0C1 242 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 ATP5OP48047 213 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 PANK4Q9NVE7 773 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 TOM1L1O75674 476 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 SPOPLQ6IQ16 392 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 TRMT44Q8IYL2 757 aaKnown RBP10.06□□□□□ -0.8
VPS13A-203ENST00000360280 DNAAF3Q8N9W5 541 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 OTUB1Q96FW1 271 aaPredicted RBP10.06□□□□□ -0.8
VPS13A-203ENST00000360280 MMS19Q96T76 1030 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 DUOX2Q9NRD8 1548 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 DISP3Q9P2K9 1392 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 ZNF233A6NK53 670 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 MYO1FO00160 1098 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 TAC1P20366 129 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 NELFCDQ8IXH7 590 aa10.06□□□□□ -0.8
VPS13A-203ENST00000360280 STX18Q9P2W9 335 aaKnown RBP10.06□□□□□ -0.8
VPS13A-203ENST00000360280 FAM83GA6ND36 823 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 NLRX1Q86UT6 975 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 CYTH2Q99418 400 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 RIMS2Q9UQ26 1411 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 ZBTB18Q99592 522 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 V9GY48 417 aaPredicted RBP10.05□□□□□ -0.8
VPS13A-203ENST00000360280 MED21Q13503 144 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 ANGPTL8Q6UXH0 198 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 CDC37L1Q7L3B6 337 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 MRPL50Q8N5N7 158 aaKnown RBP10.05□□□□□ -0.8
VPS13A-203ENST00000360280 RNF169Q8NCN4 708 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 K7ENM7 598 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 CHUKO15111 745 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 KRT75O95678 551 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 PAMP19021 973 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 ZNF212Q9UDV6 495 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 STRIP2Q9ULQ0 834 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 NUP160Q12769 1436 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 DEAF1O75398 565 aaPredicted RBP10.05□□□□□ -0.8
VPS13A-203ENST00000360280 KSR1Q8IVT5 923 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 CATSPER1Q8NEC5 780 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 CEP55Q53EZ4 464 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 APPBP2Q92624 585 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 DDIT3P35638 169 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 GRM1Q13255 1194 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 AKAP4Q5JQC9 854 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 DEPTORQ8TB45 409 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 NEK9Q8TD19 979 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 PBKQ96KB5 322 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 ZNF229Q9UJW7 825 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 FLT4P35916 1363 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 GSNP06396 782 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 XPAP23025 273 aaPredicted RBP10.05□□□□□ -0.8
VPS13A-203ENST00000360280 EHHADHQ08426 723 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 PPM1KQ8N3J5 372 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 PARD3BQ8TEW8 1205 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 POLR2FP61218 127 aaKnown RBP10.05□□□□□ -0.8
VPS13A-203ENST00000360280 EXOC3L4Q17RC7 722 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 GJC2Q5T442 439 aaPredicted RBP10.05□□□□□ -0.8
VPS13A-203ENST00000360280 METTL13Q8N6R0 699 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 ANO3Q9BYT9 981 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 SLC5A4Q9NY91 659 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 TMEM191BP0C7N4 346 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 PLEKHM3Q6ZWE6 761 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 TRPV6Q9H1D0 765 aa10.05□□□□□ -0.8
VPS13A-203ENST00000360280 MT-ND3P03897 115 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 NFKBIAP25963 317 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 NR1H3Q13133 447 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 USH1GQ495M9 461 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 TCP11X2Q5H9J9 407 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 DAB1O75553 588 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 RNF217Q8TC41 542 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 YWHAHQ04917 246 aaPredicted RBP10.04□□□□□ -0.8
VPS13A-203ENST00000360280 TRIM67Q6ZTA4 783 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 TADA2BQ86TJ2 420 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 RBM17Q96I25 401 aaKnown RBP10.04□□□□□ -0.8
VPS13A-203ENST00000360280 NOS1P29475 1434 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 HIBCHQ6NVY1 386 aaPredicted RBP10.04□□□□□ -0.8
VPS13A-203ENST00000360280 RETREG2Q8NC44 543 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 NSFL1CQ9UNZ2 370 aaKnown RBP10.04□□□□□ -0.8
VPS13A-203ENST00000360280 SESN1Q9Y6P5 492 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 GPAA1O43292 621 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 SCG2P13521 617 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 BRD2P25440 801 aaKnown RBP10.04□□□□□ -0.8
VPS13A-203ENST00000360280 CACTINQ8WUQ7 758 aaKnown RBP10.04□□□□□ -0.8
VPS13A-203ENST00000360280 OPTNQ96CV9 577 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 KLC2Q9H0B6 622 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 MMEP08473 750 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 TPH2Q8IWU9 490 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 JARID2Q92833 1246 aaPredicted RBP10.04□□□□□ -0.8
VPS13A-203ENST00000360280 BLZF1Q9H2G9 400 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 STK17AQ9UEE5 414 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 S100A5P33763 92 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 CAPRIN1Q14444 709 aaKnown RBP10.04□□□□□ -0.8
VPS13A-203ENST00000360280 MYSM1Q5VVJ2 828 aa10.04□□□□□ -0.8
VPS13A-203ENST00000360280 KRT39Q6A163 491 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms