RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 PNMA5Q96PV4 448 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 PANX2Q96RD6 677 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 ANO3Q9BYT9 981 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 PPP1R1BQ9UD71 204 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.51■□□□□ 0.872e-7■■□□□ 12.8
PDLIM7-203ENST00000359895 FER1L6Q2WGJ9 1857 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 PVALEFA0A1B0GWK0 134 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 TEX33O43247 280 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 TBC1D12O60347 775 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 TPM1P09493 284 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 EEF1GP26641 437 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 MMP14P50281 582 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 FAM83AQ86UY5 434 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 KIF18AQ8NI77 898 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 SNX29Q8TEQ0 813 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 LARP4BQ92615 738 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 NAA15Q9BXJ9 866 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 GOPCQ9HD26 462 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 KDM3AQ9Y4C1 1321 aa20.5■□□□□ 0.87
PDLIM7-203ENST00000359895 CNTNAP1P78357 1384 aa20.5■□□□□ 0.87
PDLIM7-203ENST00000359895 CLRN2A0PK11 232 aa20.5■□□□□ 0.87
PDLIM7-203ENST00000359895 N4BP3O15049 544 aa20.5■□□□□ 0.87
PDLIM7-203ENST00000359895 TGFB2P61812 414 aa20.5■□□□□ 0.87
PDLIM7-203ENST00000359895 JAG1P78504 1218 aa20.5■□□□□ 0.87
PDLIM7-203ENST00000359895 TRIM14Q14142 442 aa20.5■□□□□ 0.87
PDLIM7-203ENST00000359895 TMEM119Q4V9L6 283 aa20.5■□□□□ 0.87
PDLIM7-203ENST00000359895 RAD54LQ92698 747 aa20.5■□□□□ 0.87
PDLIM7-203ENST00000359895 HAS1Q92839 578 aa20.5■□□□□ 0.87
PDLIM7-203ENST00000359895 CCDC51Q96ER9 411 aa20.5■□□□□ 0.87
PDLIM7-203ENST00000359895 MBOAT7Q96N66 472 aa20.5■□□□□ 0.87
PDLIM7-203ENST00000359895 BLOC1S4Q9NUP1 217 aa20.5■□□□□ 0.87
PDLIM7-203ENST00000359895 PCDHA12Q9UN75 941 aa20.5■□□□□ 0.87
PDLIM7-203ENST00000359895 GOLGA6L9A6NEM1 432 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 USP17L15C9J2P7 530 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 USP17L13C9JLJ4 530 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 USP17L11C9JVI0 530 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 USP17L18D6R9N7 530 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 USP17L22D6RA61 530 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 USP17L17D6RBQ6 530 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 USP17L19D6RCP7 530 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 USP17L20D6RJB6 530 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 CCNE1P24864 410 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 USP17L24Q0WX57 530 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 RRP1BQ14684 758 aaKnown RBP20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 PTPN21Q16825 1174 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 USP17L6PQ6QN14 398 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 UNC13DQ70J99 1090 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 SLFN12Q8IYM2 578 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 TRIM47Q96LD4 638 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 NT5C3AQ9H0P0 336 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 PIM2Q9P1W9 311 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 MAPK8IP1Q9UQF2 711 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 TMX2Q9Y320 296 aa20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 BRCA1P38398 1863 aaKnown RBP20.49■□□□□ 0.87
PDLIM7-203ENST00000359895 POTEMA6NI47 508 aa20.48■□□□□ 0.87
PDLIM7-203ENST00000359895 MEIS2O14770 477 aa20.48■□□□□ 0.87
PDLIM7-203ENST00000359895 ADKP55263 362 aaKnown RBP20.48■□□□□ 0.87
PDLIM7-203ENST00000359895 HYIQ5T013 277 aa20.48■□□□□ 0.87
PDLIM7-203ENST00000359895 CNGA4Q8IV77 575 aa20.48■□□□□ 0.87
PDLIM7-203ENST00000359895 FAM114A1Q8IWE2 563 aa20.48■□□□□ 0.87
PDLIM7-203ENST00000359895 ZNF592Q92610 1267 aa20.48■□□□□ 0.87
PDLIM7-203ENST00000359895 P2RX5Q93086 422 aa20.48■□□□□ 0.87
PDLIM7-203ENST00000359895 NUP88Q99567 741 aaPredicted RBP20.48■□□□□ 0.87
PDLIM7-203ENST00000359895 MAGEC2Q9UBF1 373 aaPredicted RBP20.48■□□□□ 0.87
PDLIM7-203ENST00000359895 ATAD5Q96QE3 1844 aa20.48■□□□□ 0.87
PDLIM7-203ENST00000359895 A0A1W2PRG0 241 aa20.47■□□□□ 0.87
PDLIM7-203ENST00000359895 TBX3O15119 743 aa20.47■□□□□ 0.87
PDLIM7-203ENST00000359895 CCT6AP40227 531 aaKnown RBP20.47■□□□□ 0.87
PDLIM7-203ENST00000359895 GOLGA8FQ08AF8 430 aa20.47■□□□□ 0.87
PDLIM7-203ENST00000359895 GOLGA8DPQ0D2H9 430 aa20.47■□□□□ 0.87
PDLIM7-203ENST00000359895 MCM6Q14566 821 aa20.47■□□□□ 0.87
PDLIM7-203ENST00000359895 TTI2Q6NXR4 508 aa20.47■□□□□ 0.87
PDLIM7-203ENST00000359895 SH2D4AQ9H788 454 aa20.47■□□□□ 0.87
PDLIM7-203ENST00000359895 KCNMB3Q9NPA1 279 aa20.47■□□□□ 0.87
PDLIM7-203ENST00000359895 ZBTB21Q9ULJ3 1066 aa20.47■□□□□ 0.87
PDLIM7-203ENST00000359895 SPDYE3A6NKU9 549 aa20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 CTIFO43310 598 aaKnown RBP20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 STAT2P52630 851 aa20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 PSMD2Q13200 908 aa20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 CRYGNQ8WXF5 182 aa20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 VEZTQ9HBM0 779 aa20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 TAB2Q9NYJ8 693 aa20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 PRR12Q9ULL5 1215 aa20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 ZBTB12Q9Y330 459 aaPredicted RBP20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 STK24Q9Y6E0 443 aa20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 TRIM49BA6NDI0 452 aa20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 MYMKA6NI61 221 aa20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 COBLO75128 1261 aa20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 ARHGAP4P98171 946 aa20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 RBL2Q08999 1139 aa20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 SYCP1Q15431 976 aa20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 Q4G0T1 1027 aa20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 MTERF4Q7Z6M4 381 aaKnown RBP20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 ZBED3Q96IU2 234 aaPredicted RBP20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 MAP7D2Q96T17 732 aa20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 SRRTQ9BXP5 876 aaKnown RBP20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 VPS16Q9H269 839 aa20.46■□□□□ 0.87
PDLIM7-203ENST00000359895 PIK3CDO00329 1044 aa20.45■□□□□ 0.86
PDLIM7-203ENST00000359895 PLA2G6O60733 806 aa20.45■□□□□ 0.86
PDLIM7-203ENST00000359895 MFAP3LO75121 409 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms