RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 PPP2R2DQ66LE6 453 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 ZDHHC15Q96MV8 337 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 R3HDMLQ9H3Y0 253 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 BRMS1Q9HCU9 246 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 RTEL1Q9NZ71 1219 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 AGTPBP1Q9UPW5 1226 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 COL11A1P12107 1806 aaPredicted RBP4.35□□□□□ -1.71
SMC1B-201ENST00000357450 RPTORQ8N122 1335 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 PITPNM2Q9BZ72 1349 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 SGPL1O95470 568 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 ZFYP08048 801 aaPredicted RBP4.35□□□□□ -1.71
SMC1B-201ENST00000357450 PARP1P09874 1014 aaKnown RBP4.35□□□□□ -1.71
SMC1B-201ENST00000357450 MMP14P50281 582 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 STK3Q13188 491 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 SAFBQ15424 915 aaKnown RBP eCLIP4.35□□□□□ -1.71
SMC1B-201ENST00000357450 L1TD1Q5T7N2 865 aaKnown RBP4.35□□□□□ -1.71
SMC1B-201ENST00000357450 CXCL17Q6UXB2 119 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 ZFPM1Q8IX07 1006 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 TRIM22Q8IYM9 498 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 TEX13BQ9BXU2 312 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 SLITRK6Q9H5Y7 841 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 SAGE1Q9NXZ1 904 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 SUGT1Q9Y2Z0 365 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 GPAA1O43292 621 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 CHMP2AO43633 222 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 EEF2P13639 858 aaKnown RBP4.35□□□□□ -1.71
SMC1B-201ENST00000357450 NCLP19338 710 aaKnown RBP4.35□□□□□ -1.71
SMC1B-201ENST00000357450 MX1P20591 662 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 NLRP5P59047 1200 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 ATP8B2P98198 1209 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 HDLBPQ00341 1268 aaKnown RBP4.35□□□□□ -1.71
SMC1B-201ENST00000357450 BEX3Q00994 111 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 TTC30AQ86WT1 665 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 GTF3C2Q8WUA4 911 aaPredicted RBP4.35□□□□□ -1.71
SMC1B-201ENST00000357450 APOL5Q9BWW9 433 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 RABGAP1Q9Y3P9 1069 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 SPTA1P02549 2419 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 LOC100996750A0A140TA64 210 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 HIP1O00291 1037 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 EDIL3O43854 480 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 TLL1O43897 1013 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 TXNP10599 105 aaKnown RBP4.34□□□□□ -1.71
SMC1B-201ENST00000357450 GNAT2P19087 354 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 RTP1P59025 263 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 GPR142Q7Z601 462 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 RPUSD2Q8IZ73 545 aaKnown RBP4.34□□□□□ -1.71
SMC1B-201ENST00000357450 CCDC155Q8N6L0 562 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 PRPF38AQ8NAV1 312 aaKnown RBP4.34□□□□□ -1.71
SMC1B-201ENST00000357450 TRERF1Q96PN7 1200 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 KRTAP4-6Q9BYQ5 205 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 PRM3Q9NNZ6 103 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 FBXL21Q9UKT6 434 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 INPP5FQ9Y2H2 1132 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 WDFY4Q6ZS81 3184 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 ZNF236Q9UL36 1845 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 OTOFQ9HC10 1997 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 RNF113AO15541 343 aaKnown RBP4.34□□□□□ -1.71
SMC1B-201ENST00000357450 GNRH1P01148 92 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 CASTP20810 708 aaKnown RBP4.34□□□□□ -1.71
SMC1B-201ENST00000357450 ZNF280AP59817 542 aaPredicted RBP4.34□□□□□ -1.71
SMC1B-201ENST00000357450 FAM110CQ1W6H9 321 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 AAK1Q2M2I8 961 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 PAN2Q504Q3 1202 aaKnown RBP4.34□□□□□ -1.71
SMC1B-201ENST00000357450 TREML2Q5T2D2 321 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 NLRX1Q86UT6 975 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 CDK5RAP3Q96JB5 506 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 APOL6Q9BWW8 343 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 SLC12A7Q9Y666 1083 aa4.34□□□□□ -1.71
SMC1B-201ENST00000357450 TSC2P49815 1807 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 ASB14A6NK59 587 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 TBC1D12O60347 775 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 FGBP02675 491 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 AKR1A1P14550 325 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 MCM4P33991 863 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 CDK8P49336 464 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 NAPAP54920 295 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 MAP2K5Q13163 448 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 WTAPQ15007 396 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 LONRF3Q496Y0 759 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 APTXQ7Z2E3 356 aaKnown RBP4.34□□□□□ -1.72
SMC1B-201ENST00000357450 BRAPQ7Z569 592 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 ANKRD23Q86SG2 305 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 TRMT44Q8IYL2 757 aaKnown RBP4.34□□□□□ -1.72
SMC1B-201ENST00000357450 ZNF454Q8N9F8 522 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 APBA2Q99767 749 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 LSG1Q9H089 658 aaKnown RBP4.34□□□□□ -1.72
SMC1B-201ENST00000357450 ACAD9Q9H845 621 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 KCND1Q9NSA2 647 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 SPTLC3Q9NUV7 552 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 SWAP70Q9UH65 585 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 PUF60Q9UHX1 559 aaKnown RBP4.34□□□□□ -1.72
SMC1B-201ENST00000357450 PCDHA1Q9Y5I3 950 aa4.34□□□□□ -1.72
SMC1B-201ENST00000357450 DENND3A2RUS2 1198 aa4.33□□□□□ -1.72
SMC1B-201ENST00000357450 F5H6K3 240 aa4.33□□□□□ -1.72
SMC1B-201ENST00000357450 CTDNEP1O95476 244 aa4.33□□□□□ -1.72
SMC1B-201ENST00000357450 SUPT20HL2P0C7V6 817 aa4.33□□□□□ -1.72
SMC1B-201ENST00000357450 KLRC3Q07444 240 aa4.33□□□□□ -1.72
SMC1B-201ENST00000357450 TTLL4Q14679 1199 aa4.33□□□□□ -1.72
SMC1B-201ENST00000357450 GRIK5Q16478 980 aa4.33□□□□□ -1.72
SMC1B-201ENST00000357450 RNF207Q6ZRF8 634 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms