RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 SHC2P98077 582 aa10.98□□□□□ -0.65
UBE2D3-205ENST00000350435 RING1Q06587 406 aa10.98□□□□□ -0.65
UBE2D3-205ENST00000350435 CCDC27Q2M243 656 aa10.98□□□□□ -0.65
UBE2D3-205ENST00000350435 KIAA1755Q5JYT7 1200 aa10.98□□□□□ -0.65
UBE2D3-205ENST00000350435 PRR23BQ6ZRT6 265 aa10.98□□□□□ -0.65
UBE2D3-205ENST00000350435 ANKRD35Q8N283 1001 aa10.98□□□□□ -0.65
UBE2D3-205ENST00000350435 SMOC2Q9H3U7 446 aa10.98□□□□□ -0.65
UBE2D3-205ENST00000350435 TSHZ2Q9NRE2 1034 aa10.98□□□□□ -0.65
UBE2D3-205ENST00000350435 CEP126Q9P2H0 1117 aa10.98□□□□□ -0.65
UBE2D3-205ENST00000350435 RWDD3Q9Y3V2 267 aa10.98□□□□□ -0.65
UBE2D3-205ENST00000350435 FARP1Q9Y4F1 1045 aaPredicted RBP10.98□□□□□ -0.65
UBE2D3-205ENST00000350435 NAV1Q8NEY1 1877 aa10.98□□□□□ -0.65
UBE2D3-205ENST00000350435 BPTFQ12830 3046 aa10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 CYSRT1A8MQ03 144 aa10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 MPHOSPH10O00566 681 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 WDR46O15213 610 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 UPP2O95045 317 aa10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 MMP1P03956 469 aa10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 NBPF7P0C2Y1 421 aaPredicted RBP10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 PMLP29590 882 aa10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 NRIP1P48552 1158 aa10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 SLC4A3P48751 1232 aa10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 CPT1AP50416 773 aa10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 PTGISQ16647 500 aa10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 IQSEC1Q6DN90 963 aa10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 SNRNP48Q6IEG0 339 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 FIBCD1Q8N539 461 aa10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 ANKRD44Q8N8A2 993 aa10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 PPP1R13LQ8WUF5 828 aa10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 FGD4Q96M96 766 aa10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 TEX13BQ9BXU2 312 aa10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 MYH8P13535 1937 aa10.97□□□□□ -0.65
UBE2D3-205ENST00000350435 E9PSI1 815 aa10.96□□□□□ -0.65
UBE2D3-205ENST00000350435 TAF4O00268 1085 aa10.96□□□□□ -0.65
UBE2D3-205ENST00000350435 GLP2RO95838 553 aa10.96□□□□□ -0.65
UBE2D3-205ENST00000350435 ADORA1P30542 326 aa10.96□□□□□ -0.65
UBE2D3-205ENST00000350435 BMPR1AP36894 532 aa10.96□□□□□ -0.65
UBE2D3-205ENST00000350435 ADGRD2Q7Z7M1 963 aa10.96□□□□□ -0.65
UBE2D3-205ENST00000350435 SRCIN1Q9C0H9 1055 aa10.96□□□□□ -0.65
UBE2D3-205ENST00000350435 EHD4Q9H223 541 aa10.96□□□□□ -0.65
UBE2D3-205ENST00000350435 SH2D4AQ9H788 454 aa10.96□□□□□ -0.65
UBE2D3-205ENST00000350435 ANKFY1Q9P2R3 1169 aa10.96□□□□□ -0.65
UBE2D3-205ENST00000350435 STK25O00506 426 aa10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 SLC30A4O14863 429 aa10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 LGR5O75473 907 aa10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 SP9P0CG40 484 aa10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 NPR3P17342 541 aa10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 BRDTQ58F21 947 aaPredicted RBP10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 SLC4A10Q6U841 1118 aa10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 UNQ6494/PRO21346Q6UXR6 183 aa10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 TBC1D9Q6ZT07 1266 aa10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 ATG9AQ7Z3C6 839 aa10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 RBM23Q86U06 439 aaKnown RBP10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 FAM133AQ8N9E0 248 aa10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 REPS2Q8NFH8 660 aa10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 TOP1MTQ969P6 601 aa10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 VCPKMTQ9H867 229 aa10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 ARHGEF10LQ9HCE6 1279 aa10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 FBXO28Q9NVF7 368 aa10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 PPP1R9AQ9ULJ8 1098 aa10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 COL4A3Q01955 1670 aa10.95□□□□□ -0.66
UBE2D3-205ENST00000350435 ASB14A6NK59 587 aa10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 C1QTNF9BB2RNN3 333 aa10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 C1QTNF9P0C862 333 aa10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 ARP10275 920 aa10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 CKBP12277 381 aa10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 CHMP4BP1P59074 171 aa10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 PPP4CP60510 307 aa10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 NAA16Q6N069 864 aaPredicted RBP10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 TTC6Q86TZ1 520 aa10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 KDF1Q8NAX2 398 aaPredicted RBP10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 NETO1Q8TDF5 533 aa10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 DDX1Q92499 740 aaKnown RBP10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 BORCS6Q96GS4 357 aa10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 NEK1Q96PY6 1258 aa10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 PDGFCQ9NRA1 345 aa10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 LRP2BPQ9P2M1 347 aa10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 RIPK3Q9Y572 518 aa10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 HELZ2Q9BYK8 2649 aaKnown RBP10.94□□□□□ -0.66
UBE2D3-205ENST00000350435 CEP295Q9C0D2 2601 aa10.93□□□□□ -0.66
UBE2D3-205ENST00000350435 DSPP15924 2871 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-205ENST00000350435 RFX1P22670 979 aa10.93□□□□□ -0.66
UBE2D3-205ENST00000350435 SHMT1P34896 483 aa10.93□□□□□ -0.66
UBE2D3-205ENST00000350435 RBL2Q08999 1139 aa10.93□□□□□ -0.66
UBE2D3-205ENST00000350435 KIAA1211Q6ZU35 1233 aa10.93□□□□□ -0.66
UBE2D3-205ENST00000350435 TSR2Q969E8 191 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-205ENST00000350435 IL17RAQ96F46 866 aa10.93□□□□□ -0.66
UBE2D3-205ENST00000350435 FBXO40Q9UH90 709 aa10.93□□□□□ -0.66
UBE2D3-205ENST00000350435 FSD2A1L4K1 749 aa10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 C2CD4DB7Z1M9 353 aa10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 KPNA6O60684 536 aa10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 ASGR2P07307 311 aa10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 SRGAP2BP0DMP2 458 aa10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 CNTN2Q02246 1040 aa10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 CAMK1Q14012 370 aa10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 TMEM63BQ5T3F8 832 aa10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 N4BP2L1Q5TBK1 243 aaPredicted RBP10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 EEPD1Q7L9B9 569 aa10.92□□□□□ -0.66
UBE2D3-205ENST00000350435 FBXO16Q8IX29 292 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms