RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 STAG2Q8N3U4 1231 aa20.65■□□□□ 0.9
CKLF-202ENST00000345436 TAAR1Q96RJ0 339 aa20.65■□□□□ 0.9
CKLF-202ENST00000345436 HIPK3Q9H422 1215 aa20.65■□□□□ 0.9
CKLF-202ENST00000345436 RBM8AQ9Y5S9 174 aaKnown RBP20.65■□□□□ 0.9
CKLF-202ENST00000345436 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.64■□□□□ 0.89
CKLF-202ENST00000345436 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.64■□□□□ 0.89
CKLF-202ENST00000345436 PSRC1Q6PGN9 363 aaPredicted RBP20.64■□□□□ 0.89
CKLF-202ENST00000345436 KCNV1Q6PIU1 500 aa20.64■□□□□ 0.89
CKLF-202ENST00000345436 RPUSD2Q8IZ73 545 aaKnown RBP20.64■□□□□ 0.89
CKLF-202ENST00000345436 SLC17A8Q8NDX2 589 aa20.64■□□□□ 0.89
CKLF-202ENST00000345436 CTCFLQ8NI51 663 aaPredicted RBP20.64■□□□□ 0.89
CKLF-202ENST00000345436 MTMR8Q96EF0 704 aa20.64■□□□□ 0.89
CKLF-202ENST00000345436 MAP3K14Q99558 947 aa20.64■□□□□ 0.89
CKLF-202ENST00000345436 A6NJR5 290 aa20.63■□□□□ 0.89
CKLF-202ENST00000345436 GH1P01241 217 aa20.63■□□□□ 0.89
CKLF-202ENST00000345436 MCM5P33992 734 aa20.63■□□□□ 0.89
CKLF-202ENST00000345436 GNAQP50148 359 aa20.63■□□□□ 0.89
CKLF-202ENST00000345436 PURAQ00577 322 aaKnown RBP20.63■□□□□ 0.89
CKLF-202ENST00000345436 RNF20Q5VTR2 975 aa20.63■□□□□ 0.89
CKLF-202ENST00000345436 SEPT14Q6ZU15 432 aa20.63■□□□□ 0.89
CKLF-202ENST00000345436 HOMER1Q86YM7 354 aa20.63■□□□□ 0.89
CKLF-202ENST00000345436 LZTS2Q9BRK4 669 aa20.63■□□□□ 0.89
CKLF-202ENST00000345436 PPP1R12CQ9BZL4 782 aa20.63■□□□□ 0.89
CKLF-202ENST00000345436 RIOX1Q9H6W3 641 aa20.63■□□□□ 0.89
CKLF-202ENST00000345436 TMEM265A0A087WTH1 108 aa20.62■□□□□ 0.89
CKLF-202ENST00000345436 PNMA6FA0A0J9YX94 578 aa20.62■□□□□ 0.89
CKLF-202ENST00000345436 GCOM1H8Y6P7 765 aaPredicted RBP20.62■□□□□ 0.89
CKLF-202ENST00000345436 POLR2MP0CAP2 368 aa20.62■□□□□ 0.89
CKLF-202ENST00000345436 HSD17B4P51659 736 aa20.62■□□□□ 0.89
CKLF-202ENST00000345436 PTPN11Q06124 597 aaPredicted RBP20.62■□□□□ 0.89
CKLF-202ENST00000345436 NFXL1Q6ZNB6 911 aa20.62■□□□□ 0.89
CKLF-202ENST00000345436 TBC1D5Q92609 795 aa20.62■□□□□ 0.89
CKLF-202ENST00000345436 TMEM87BQ96K49 555 aa20.62■□□□□ 0.89
CKLF-202ENST00000345436 ALDH8A1Q9H2A2 487 aaPredicted RBP20.62■□□□□ 0.89
CKLF-202ENST00000345436 LTBP2Q14767 1821 aa20.62■□□□□ 0.89
CKLF-202ENST00000345436 SZT2Q5T011 3432 aa20.62■□□□□ 0.89
CKLF-202ENST00000345436 NR3C2P08235 984 aa20.61■□□□□ 0.89
CKLF-202ENST00000345436 CALM1P0DP23 149 aa20.61■□□□□ 0.89
CKLF-202ENST00000345436 CALM2P0DP24 149 aa20.61■□□□□ 0.89
CKLF-202ENST00000345436 CALM3P0DP25 149 aa20.61■□□□□ 0.89
CKLF-202ENST00000345436 CSF2RAP15509 400 aa20.61■□□□□ 0.89
CKLF-202ENST00000345436 EIF2AK2P19525 551 aaKnown RBP20.61■□□□□ 0.89
CKLF-202ENST00000345436 CASTP20810 708 aaKnown RBP20.61■□□□□ 0.89
CKLF-202ENST00000345436 EPHB4P54760 987 aa20.61■□□□□ 0.89
CKLF-202ENST00000345436 PSMC6P62333 389 aa20.61■□□□□ 0.89
CKLF-202ENST00000345436 TROAPQ12815 778 aa20.61■□□□□ 0.89
CKLF-202ENST00000345436 FAM47CQ5HY64 1035 aa20.61■□□□□ 0.89
CKLF-202ENST00000345436 TMEM63BQ5T3F8 832 aa20.61■□□□□ 0.89
CKLF-202ENST00000345436 NFRKBQ6P4R8 1299 aa20.61■□□□□ 0.89
CKLF-202ENST00000345436 IGDCC4Q8TDY8 1250 aa20.61■□□□□ 0.89
CKLF-202ENST00000345436 ESYT1Q9BSJ8 1104 aa20.61■□□□□ 0.89
CKLF-202ENST00000345436 TRPV6Q9H1D0 765 aa20.61■□□□□ 0.89
CKLF-202ENST00000345436 IL23AQ9NPF7 189 aa20.61■□□□□ 0.89
CKLF-202ENST00000345436 PXMP2Q9NR77 195 aa20.61■□□□□ 0.89
CKLF-202ENST00000345436 GRIN2DO15399 1336 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 CCDC69A6NI79 296 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 B4GALT4O60513 344 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 DDAH1O94760 285 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 FGBP02675 491 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 SMARCA1P28370 1054 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 CYP2C18P33260 490 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 GHRHRQ02643 423 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 LAMC2Q13753 1193 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 BMP2KLQ5H9B9 411 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 CCDC62Q6P9F0 684 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 STOX1Q6ZVD7 989 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 CHST3Q7LGC8 479 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 MB21D2Q8IYB1 491 aaPredicted RBP20.6■□□□□ 0.89
CKLF-202ENST00000345436 PIGSQ96S52 555 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 ANO2Q9NQ90 1003 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 SEC63Q9UGP8 760 aaKnown RBP20.6■□□□□ 0.89
CKLF-202ENST00000345436 NOD1Q9Y239 953 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 MRVI1Q9Y6F6 885 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 LAMA3Q16787 3333 aa20.6■□□□□ 0.89
CKLF-202ENST00000345436 PRC1O43663 620 aa20.59■□□□□ 0.89
CKLF-202ENST00000345436 DGKDQ16760 1214 aa20.59■□□□□ 0.89
CKLF-202ENST00000345436 TMEM240Q5SV17 173 aa20.59■□□□□ 0.89
CKLF-202ENST00000345436 SYNE3Q6ZMZ3 975 aa20.59■□□□□ 0.89
CKLF-202ENST00000345436 RETREG2Q8NC44 543 aa20.59■□□□□ 0.89
CKLF-202ENST00000345436 RRP36Q96EU6 259 aaKnown RBP20.59■□□□□ 0.89
CKLF-202ENST00000345436 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.59■□□□□ 0.891e-10■□□□□ 8.5
CKLF-202ENST00000345436 SEMA6BQ9H3T3 888 aa20.59■□□□□ 0.89
CKLF-202ENST00000345436 PFKMP08237 780 aa20.58■□□□□ 0.89
CKLF-202ENST00000345436 TGFB3P10600 412 aa20.58■□□□□ 0.89
CKLF-202ENST00000345436 MYCLP12524 364 aaPredicted RBP20.58■□□□□ 0.89
CKLF-202ENST00000345436 PTGS1P23219 599 aa20.58■□□□□ 0.89
CKLF-202ENST00000345436 LY6KQ17RY6 165 aa20.58■□□□□ 0.89
CKLF-202ENST00000345436 NBPF20Q3BBV1 942 aa20.58■□□□□ 0.89
CKLF-202ENST00000345436 ZNF365Q70YC5 407 aa20.58■□□□□ 0.89
CKLF-202ENST00000345436 DHX37Q8IY37 1157 aaKnown RBP20.58■□□□□ 0.89
CKLF-202ENST00000345436 ZNF654Q8IZM8 581 aa20.58■□□□□ 0.89
CKLF-202ENST00000345436 COPS5Q92905 334 aa20.58■□□□□ 0.89
CKLF-202ENST00000345436 CUL5Q93034 780 aa20.58■□□□□ 0.89
CKLF-202ENST00000345436 FAM161BQ96MY7 647 aa20.58■□□□□ 0.89
CKLF-202ENST00000345436 NOC4LQ9BVI4 516 aaKnown RBP20.58■□□□□ 0.89
CKLF-202ENST00000345436 KATNAL1Q9BW62 490 aa20.58■□□□□ 0.89
CKLF-202ENST00000345436 LSG1Q9H089 658 aaKnown RBP20.58■□□□□ 0.89
CKLF-202ENST00000345436 COL20A1Q9P218 1284 aa20.58■□□□□ 0.89
CKLF-202ENST00000345436 CCND2P30279 289 aa20.57■□□□□ 0.88
CKLF-202ENST00000345436 LIFRP42702 1097 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms