RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ZBTB48P10074 688 aaPredicted RBP16.67■□□□□ 0.26
CXCL12-201ENST00000343575 SREBF1P36956 1147 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 GTF2A2P52657 109 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 SPECC1Q5M775 1068 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 FCHSD1Q86WN1 690 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 JMYQ8N9B5 988 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 PRIMPOLQ96LW4 560 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 PTPN18Q99952 460 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 TEX13BQ9BXU2 312 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 TXNRD2Q9NNW7 524 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 FAM13BQ9NYF5 915 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 A0A1B0GVL5 298 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 CETPP11597 493 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 CMA1P23946 247 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 STAT3P40763 770 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 IRX3P78415 501 aaPredicted RBP16.67■□□□□ 0.26
CXCL12-201ENST00000343575 ARHGAP4P98171 946 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 PPP4R3AQ6IN85 833 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 USP49Q70CQ1 688 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 RNF146Q9NTX7 359 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 RBPJLQ9UBG7 517 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 CTDP1Q9Y5B0 961 aaPredicted RBP16.67■□□□□ 0.26
CXCL12-201ENST00000343575 CCL15-CCL14A0A0B4J2E2 113 aa16.66■□□□□ 0.26
CXCL12-201ENST00000343575 FAM237AA0A1B0GTK4 181 aa16.66■□□□□ 0.26
CXCL12-201ENST00000343575 USP11P51784 963 aa16.66■□□□□ 0.26
CXCL12-201ENST00000343575 NDUFA8P51970 172 aa16.66■□□□□ 0.26
CXCL12-201ENST00000343575 CCL15Q16663 113 aa16.66■□□□□ 0.26
CXCL12-201ENST00000343575 RESP18Q5W5W9 173 aa16.66■□□□□ 0.26
CXCL12-201ENST00000343575 MCTP2Q6DN12 878 aa16.66■□□□□ 0.26
CXCL12-201ENST00000343575 POTEDQ86YR6 584 aa16.66■□□□□ 0.26
CXCL12-201ENST00000343575 RASAL3Q86YV0 1011 aa16.66■□□□□ 0.26
CXCL12-201ENST00000343575 FSIP1Q8NA03 581 aa16.66■□□□□ 0.26
CXCL12-201ENST00000343575 SYTL5Q8TDW5 730 aaPredicted RBP16.66■□□□□ 0.26
CXCL12-201ENST00000343575 MBOAT7Q96N66 472 aa16.66■□□□□ 0.26
CXCL12-201ENST00000343575 MTMR9Q96QG7 549 aa16.66■□□□□ 0.26
CXCL12-201ENST00000343575 CSRNP2Q9H175 543 aa16.66■□□□□ 0.26
CXCL12-201ENST00000343575 DACT1Q9NYF0 836 aa16.66■□□□□ 0.26
CXCL12-201ENST00000343575 PNMA2Q9UL42 364 aa16.66■□□□□ 0.26
CXCL12-201ENST00000343575 HPSEQ9Y251 543 aa16.66■□□□□ 0.26
CXCL12-201ENST00000343575 CYP3A7-CYP3A51PA0A087WV96 503 aa16.65■□□□□ 0.26
CXCL12-201ENST00000343575 SPDYE3A6NKU9 549 aa16.65■□□□□ 0.26
CXCL12-201ENST00000343575 LETM1O95202 739 aaPredicted RBP16.65■□□□□ 0.26
CXCL12-201ENST00000343575 CYP2C8P10632 490 aa16.65■□□□□ 0.26
CXCL12-201ENST00000343575 CYP3A7P24462 503 aa16.65■□□□□ 0.26
CXCL12-201ENST00000343575 RPS6P62753 249 aaKnown RBP16.65■□□□□ 0.26
CXCL12-201ENST00000343575 Q3C1V9 767 aa16.65■□□□□ 0.26
CXCL12-201ENST00000343575 ARL6IP4Q66PJ3 421 aaKnown RBP16.65■□□□□ 0.26
CXCL12-201ENST00000343575 SLC30A10Q6XR72 485 aa16.65■□□□□ 0.26
CXCL12-201ENST00000343575 FMR1NBQ8N0W7 255 aaPredicted RBP16.65■□□□□ 0.26
CXCL12-201ENST00000343575 MB21D1Q8N884 522 aa16.65■□□□□ 0.26
CXCL12-201ENST00000343575 ZNF579Q8NAF0 562 aaKnown RBP16.65■□□□□ 0.26
CXCL12-201ENST00000343575 SMC1BQ8NDV3 1235 aa16.65■□□□□ 0.26
CXCL12-201ENST00000343575 MRPS27Q92552 414 aaKnown RBP16.65■□□□□ 0.26
CXCL12-201ENST00000343575 LENG9Q96B70 501 aa16.65■□□□□ 0.26
CXCL12-201ENST00000343575 PURBQ96QR8 312 aaKnown RBP16.65■□□□□ 0.26
CXCL12-201ENST00000343575 SYCE3A1L190 88 aa16.65■□□□□ 0.26
CXCL12-201ENST00000343575 CYP3A4P08684 503 aa16.65■□□□□ 0.26
CXCL12-201ENST00000343575 ORC2Q13416 577 aaPredicted RBP16.65■□□□□ 0.26
CXCL12-201ENST00000343575 PLS1Q14651 629 aa16.65■□□□□ 0.26
CXCL12-201ENST00000343575 MCF2L2Q86YR7 1114 aa16.65■□□□□ 0.26
CXCL12-201ENST00000343575 RPTORQ8N122 1335 aa16.65■□□□□ 0.26
CXCL12-201ENST00000343575 FERMT2Q96AC1 680 aa16.65■□□□□ 0.26
CXCL12-201ENST00000343575 TLL2Q9Y6L7 1015 aa16.65■□□□□ 0.26
CXCL12-201ENST00000343575 TESPA1A2RU30 521 aaPredicted RBP16.64■□□□□ 0.25
CXCL12-201ENST00000343575 VWA3AA6NCI4 1184 aa16.64■□□□□ 0.25
CXCL12-201ENST00000343575 FAM86B1E9PN63 330 aa16.64■□□□□ 0.25
CXCL12-201ENST00000343575 NEMFO60524 1076 aa16.64■□□□□ 0.25
CXCL12-201ENST00000343575 PTMAP06454 111 aaKnown RBP16.64■□□□□ 0.25
CXCL12-201ENST00000343575 FAM86B2P0C5J1 330 aa16.64■□□□□ 0.25
CXCL12-201ENST00000343575 PFKFB1P16118 471 aa16.64■□□□□ 0.25
CXCL12-201ENST00000343575 CIITAP33076 1130 aa16.64■□□□□ 0.25
CXCL12-201ENST00000343575 RBM10P98175 930 aaKnown RBP16.64■□□□□ 0.25
CXCL12-201ENST00000343575 RIOX2Q8IUF8 465 aa16.64■□□□□ 0.25
CXCL12-201ENST00000343575 CYP2W1Q8TAV3 490 aa16.64■□□□□ 0.25
CXCL12-201ENST00000343575 HAS1Q92839 578 aa16.64■□□□□ 0.25
CXCL12-201ENST00000343575 SPATC1LQ9H0A9 340 aa16.64■□□□□ 0.25
CXCL12-201ENST00000343575 MAP3K20Q9NYL2 800 aaKnown RBP16.64■□□□□ 0.25
CXCL12-201ENST00000343575 SLC45A1Q9Y2W3 748 aa16.64■□□□□ 0.25
CXCL12-201ENST00000343575 RBBP6Q7Z6E9 1792 aaKnown RBP16.64■□□□□ 0.25
CXCL12-201ENST00000343575 PDHXO00330 501 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 TOMM70O94826 608 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 OSBPP22059 807 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 PRPHP41219 470 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 ZNF157P51786 506 aaPredicted RBP16.63■□□□□ 0.25
CXCL12-201ENST00000343575 UBXN2AP68543 259 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 FAM160A1Q05DH4 1040 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 BAATQ14032 418 aaPredicted RBP16.63■□□□□ 0.25
CXCL12-201ENST00000343575 TKFCQ3LXA3 575 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 RGMBQ6NW40 437 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 MOXD1Q6UVY6 613 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 ANKRD23Q86SG2 305 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 SAMD3Q8N6K7 520 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 EPSTI1Q96J88 318 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 TAAR1Q96RJ0 339 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 FAM155AB1AL88 458 aaPredicted RBP16.63■□□□□ 0.25
CXCL12-201ENST00000343575 LAD1O00515 517 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 OR52Z1P0C646 297 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 GCFC2P16383 781 aaKnown RBP16.63■□□□□ 0.25
CXCL12-201ENST00000343575 PABPC4Q13310 644 aaKnown RBP eCLIP16.63■□□□□ 0.25
CXCL12-201ENST00000343575 NSMFQ6X4W1 530 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms