RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 FBXO38Q6PIJ6 1188 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 KLHL23Q8NBE8 558 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 CLMNQ96JQ2 1002 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 TRPV6Q9H1D0 765 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 NSMCE4AQ9NXX6 385 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 PKD2L2Q9NZM6 624 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 MORC2Q9Y6X9 1032 aaPredicted RBP6.67□□□□□ -1.34
VCAN-203ENST00000343200 HFM1A2PYH4 1435 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 CACNA1IQ9P0X4 2223 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 NVLO15381 856 aaKnown RBP6.67□□□□□ -1.34
VCAN-203ENST00000343200 WASHC5Q12768 1159 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 BEND6Q5SZJ8 279 aaPredicted RBP6.67□□□□□ -1.34
VCAN-203ENST00000343200 KIAA0825Q8IV33 1275 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 MCRS1Q96EZ8 462 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 PARVGQ9HBI0 331 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 IL1RAPL2Q9NP60 686 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 SPINK5Q9NQ38 1064 aaPredicted RBP6.67□□□□□ -1.34
VCAN-203ENST00000343200 FBXL5Q9UKA1 691 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 ALDH1L1O75891 902 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 GNA11P29992 359 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 CASP8Q14790 479 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 FRA10AC1Q70Z53 315 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 OLFM1Q99784 485 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 BOLA2Q9H3K6 86 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 DOPEY2Q9Y3R5 2298 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 PPLO60437 1756 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 DAPK3O43293 454 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 ASNA1O43681 348 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 NLRP12P59046 1061 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 BFSP1Q12934 665 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 TRIM71Q2Q1W2 868 aaKnown RBP6.67□□□□□ -1.34
VCAN-203ENST00000343200 HP1BP3Q5SSJ5 553 aaPredicted RBP6.67□□□□□ -1.34
VCAN-203ENST00000343200 XRCC5P13010 732 aaKnown RBP6.67□□□□□ -1.34
VCAN-203ENST00000343200 PLEKHO1Q53GL0 409 aaPredicted RBP6.67□□□□□ -1.34
VCAN-203ENST00000343200 TJAP1Q5JTD0 557 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 BTBD11A6QL63 1104 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 MTRF1O75570 445 aaKnown RBP6.67□□□□□ -1.34
VCAN-203ENST00000343200 PDE5AO76074 875 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 LRMPQ12912 555 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 METTL24Q5JXM2 366 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 Q6ZUG5 572 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 KCNH3Q9ULD8 1083 aa6.67□□□□□ -1.34
VCAN-203ENST00000343200 TRAF5O00463 557 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 POLR2DO15514 142 aaKnown RBP6.66□□□□□ -1.34
VCAN-203ENST00000343200 GRK2P25098 689 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 TYW1BQ6NUM6 668 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 GDAP1Q8TB36 358 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 CCDC90BQ9GZT6 254 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 KLHL25Q9H0H3 589 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 NRDE2Q9H7Z3 1164 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 ZSCAN32Q9NX65 697 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 CCPG1Q9ULG6 757 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 KLHL20Q9Y2M5 609 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 NSD3Q9BZ95 1437 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 EXOC1LA0A1B0GW35 172 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 SPDYE3A6NKU9 549 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 SLC5A1P13866 664 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 PSMC6P62333 389 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 ITGB3BPQ13352 177 aaPredicted RBP6.66□□□□□ -1.34
VCAN-203ENST00000343200 C10orf76Q5T2E6 689 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 SPATA17Q96L03 361 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 TTC25Q96NG3 672 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 SMYD3Q9H7B4 428 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 DISC1Q9NRI5 854 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 PLXNC1O60486 1568 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 GNAQP50148 359 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 ZNF444Q8N0Y2 327 aaPredicted RBP6.66□□□□□ -1.34
VCAN-203ENST00000343200 CSGALNACT2Q8N6G5 542 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 FAM96AQ9H5X1 160 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 ECHDC1Q9NTX5 307 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 C6orf203Q9P0P8 240 aaPredicted RBP6.66□□□□□ -1.34
VCAN-203ENST00000343200 FER1L5A0AVI2 2057 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 AKAP12Q02952 1782 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 UHRF1BP1Q6BDS2 1440 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 NCOA2Q15596 1464 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 KRT9P35527 623 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 RINT1Q6NUQ1 792 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 NSMCE1Q8WV22 266 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 ZFYVE19Q96K21 471 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 CLEC4MQ9H2X3 399 aaPredicted RBP6.66□□□□□ -1.34
VCAN-203ENST00000343200 PAPOLBQ9NRJ5 636 aaKnown RBP6.66□□□□□ -1.34
VCAN-203ENST00000343200 PARP1P09874 1014 aaKnown RBP6.66□□□□□ -1.34
VCAN-203ENST00000343200 MLH1P40692 756 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 HSPA13P48723 471 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 KRT81Q14533 505 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 NEUROG2Q9H2A3 272 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 ECT2Q9H8V3 914 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 PARP3Q9Y6F1 533 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 SMARCA5O60264 1052 aaPredicted RBP6.66□□□□□ -1.34
VCAN-203ENST00000343200 VCAM1P19320 739 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 KRT76Q01546 638 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 PPP2R5CQ13362 524 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 CCDC149Q6ZUS6 474 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 RASSF3Q86WH2 238 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 ZNF555Q8NEP9 628 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 EPS8L2Q9H6S3 715 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 RNF14Q9UBS8 474 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 CDC23Q9UJX2 597 aa6.66□□□□□ -1.34
VCAN-203ENST00000343200 BAZ2AQ9UIF9 1905 aaKnown RBP6.66□□□□□ -1.34
VCAN-203ENST00000343200 KRT87PA6NCN2 255 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms