RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PDXDC1Q6P996 788 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 ZC3H18Q86VM9 953 aaKnown RBP17.78■□□□□ 0.44
PTCH1-201ENST00000331920 FGFR1OP2Q9NVK5 253 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 SEPT9Q9UHD8 586 aaPredicted RBP17.78■□□□□ 0.44
PTCH1-201ENST00000331920 HS1BP3Q53T59 392 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 ARHGEF18Q6ZSZ5 1173 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 PDE11AQ9HCR9 933 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 KDM3AQ9Y4C1 1321 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 MCF2LO15068 1137 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 KITP10721 976 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 TIMM10P62072 90 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 PLEKHM3Q6ZWE6 761 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 DIS3L2Q8IYB7 885 aaKnown RBP17.78■□□□□ 0.44
PTCH1-201ENST00000331920 MYRIPQ8NFW9 859 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 SNX25Q9H3E2 840 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 HPS4Q9NQG7 708 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 WASLO00401 505 aaPredicted RBP17.78■□□□□ 0.44
PTCH1-201ENST00000331920 CREB3O43889 395 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 REXO1Q8N1G1 1221 aaKnown RBP17.78■□□□□ 0.44
PTCH1-201ENST00000331920 PPP1R16BQ96T49 567 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 KIFC3Q9BVG8 833 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 UPF3AQ9H1J1 476 aaKnown RBP17.78■□□□□ 0.44
PTCH1-201ENST00000331920 CHCHD3Q9NX63 227 aaKnown RBP17.78■□□□□ 0.44
PTCH1-201ENST00000331920 ALAS1P13196 640 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 GFAPP14136 432 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 MRPS15P82914 257 aaKnown RBP17.78■□□□□ 0.44
PTCH1-201ENST00000331920 GNPTABQ3T906 1256 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 FBXL5Q9UKA1 691 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 SLC8A2Q9UPR5 921 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 TTC41PQ6P2S7 1318 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 EHHADHQ08426 723 aa17.77■□□□□ 0.44
PTCH1-201ENST00000331920 IMPG1Q17R60 797 aa17.77■□□□□ 0.44
PTCH1-201ENST00000331920 KRT25Q7Z3Z0 450 aa17.77■□□□□ 0.44
PTCH1-201ENST00000331920 TRIM42Q8IWZ5 723 aa17.77■□□□□ 0.44
PTCH1-201ENST00000331920 SLITRK6Q9H5Y7 841 aa17.77■□□□□ 0.44
PTCH1-201ENST00000331920 PRKAG2Q9UGJ0 569 aa17.77■□□□□ 0.44
PTCH1-201ENST00000331920 SLC27A2O14975 620 aa17.77■□□□□ 0.44
PTCH1-201ENST00000331920 MOCS3O95396 460 aa17.77■□□□□ 0.44
PTCH1-201ENST00000331920 HNRNPCP07910 306 aaKnown RBP eCLIP17.77■□□□□ 0.44
PTCH1-201ENST00000331920 DPP8Q6V1X1 898 aaPredicted RBP17.77■□□□□ 0.44
PTCH1-201ENST00000331920 SULF1Q8IWU6 871 aa17.77■□□□□ 0.44
PTCH1-201ENST00000331920 BBOF1Q8ND07 529 aa17.77■□□□□ 0.44
PTCH1-201ENST00000331920 ANGPTL2Q9UKU9 493 aa17.77■□□□□ 0.44
PTCH1-201ENST00000331920 ATP8A1Q9Y2Q0 1164 aa17.77■□□□□ 0.44
PTCH1-201ENST00000331920 TTI1O43156 1089 aa17.77■□□□□ 0.44
PTCH1-201ENST00000331920 PLS3P13797 630 aa17.77■□□□□ 0.44
PTCH1-201ENST00000331920 ITGA6P23229 1130 aa17.77■□□□□ 0.44
PTCH1-201ENST00000331920 FAM178BQ8IXR5 827 aa17.77■□□□□ 0.44
PTCH1-201ENST00000331920 MAGOHBQ96A72 148 aaKnown RBP17.77■□□□□ 0.44
PTCH1-201ENST00000331920 SERPINI1Q99574 410 aa17.77■□□□□ 0.44
PTCH1-201ENST00000331920 CHEK2O96017 543 aa17.77■□□□□ 0.43
PTCH1-201ENST00000331920 NSFP46459 744 aaKnown RBP17.77■□□□□ 0.43
PTCH1-201ENST00000331920 FAM89AQ96GI7 184 aa17.77■□□□□ 0.43
PTCH1-201ENST00000331920 ZNF18P17022 549 aa17.77■□□□□ 0.43
PTCH1-201ENST00000331920 TRIP13Q15645 432 aaPredicted RBP17.77■□□□□ 0.43
PTCH1-201ENST00000331920 KCTD17Q8N5Z5 321 aa17.77■□□□□ 0.43
PTCH1-201ENST00000331920 SLMAPQ14BN4 828 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 PDCD6IPQ8WUM4 868 aaKnown RBP17.76■□□□□ 0.43
PTCH1-201ENST00000331920 SMCO2A6NFE2 343 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 HDLBPQ00341 1268 aaKnown RBP17.76■□□□□ 0.43
PTCH1-201ENST00000331920 METTL23Q86XA0 190 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 ASZ1Q8WWH4 475 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 ZFYVE1Q9HBF4 777 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 L3MBTL1Q9Y468 752 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 UBAP1LF5GYI3 381 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 MYOCDQ8IZQ8 938 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 SYNDIG1Q9H7V2 258 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 PRDM5Q9NQX1 630 aaPredicted RBP17.76■□□□□ 0.43
PTCH1-201ENST00000331920 DRP2Q13474 957 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 ST13P4Q8IZP2 240 aaPredicted RBP17.76■□□□□ 0.43
PTCH1-201ENST00000331920 PI4K2BQ8TCG2 481 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 GCNAQ96QF7 691 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 PI4K2BG5E9Z4 385 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 TMEM87BQ96K49 555 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 TRIM8Q9BZR9 551 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 GOLGA8SH3BPF8 625 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 GPAA1O43292 621 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 ANKRD36BP1Q96IX9 119 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 ZNF594Q96JF6 807 aaPredicted RBP17.76■□□□□ 0.43
PTCH1-201ENST00000331920 CALN1Q9BXU9 219 aa17.76■□□□□ 0.43
PTCH1-201ENST00000331920 PRR23D1E9PI22 279 aaPredicted RBP17.75■□□□□ 0.43
PTCH1-201ENST00000331920 PRR23D2P0DMB1 279 aaPredicted RBP17.75■□□□□ 0.43
PTCH1-201ENST00000331920 RWDD4Q6NW29 188 aaKnown RBP17.75■□□□□ 0.43
PTCH1-201ENST00000331920 CABLES1Q8TDN4 633 aa17.75■□□□□ 0.43
PTCH1-201ENST00000331920 XPO4Q9C0E2 1151 aaKnown RBP17.75■□□□□ 0.43
PTCH1-201ENST00000331920 ZNF229Q9UJW7 825 aa17.75■□□□□ 0.43
PTCH1-201ENST00000331920 H0YIN7 160 aa17.75■□□□□ 0.43
PTCH1-201ENST00000331920 MYL7Q01449 175 aa17.75■□□□□ 0.43
PTCH1-201ENST00000331920 KRT8P05787 483 aa17.75■□□□□ 0.43
PTCH1-201ENST00000331920 PDHA1P08559 390 aa17.75■□□□□ 0.43
PTCH1-201ENST00000331920 LVRNQ6Q4G3 990 aa17.75■□□□□ 0.43
PTCH1-201ENST00000331920 MIS12Q9H081 205 aa17.75■□□□□ 0.43
PTCH1-201ENST00000331920 ZCWPW1Q9H0M4 648 aa17.75■□□□□ 0.43
PTCH1-201ENST00000331920 DDX25Q9UHL0 483 aaKnown RBP17.75■□□□□ 0.43
PTCH1-201ENST00000331920 LZTS1Q9Y250 596 aa17.75■□□□□ 0.43
PTCH1-201ENST00000331920 CXCR5P32302 372 aa17.75■□□□□ 0.43
PTCH1-201ENST00000331920 YIPF2Q9BWQ6 316 aa17.75■□□□□ 0.43
PTCH1-201ENST00000331920 SPZ1Q9BXG8 430 aa17.75■□□□□ 0.43
PTCH1-201ENST00000331920 USP26Q9BXU7 913 aa17.75■□□□□ 0.43
PTCH1-201ENST00000331920 NDUFB9Q9Y6M9 179 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms