RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 C17orf53Q8N3J3 647 aaPredicted RBP7.88□□□□□ -1.15
SOX6-201ENST00000316399 CDKL2Q92772 493 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 BSDC1Q9NW68 430 aaPredicted RBP7.88□□□□□ -1.15
SOX6-201ENST00000316399 TMEM94Q12767 1356 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 PFASO15067 1338 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 HNRNPCL1O60812 293 aaKnown RBP7.88□□□□□ -1.15
SOX6-201ENST00000316399 NDUFA10O95299 355 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 SERPING1P05155 500 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 ICA1Q05084 483 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 KIRREL3Q8IZU9 778 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 CACTINQ8WUQ7 758 aaKnown RBP7.88□□□□□ -1.15
SOX6-201ENST00000316399 ZNF277Q9NRM2 450 aaPredicted RBP7.88□□□□□ -1.15
SOX6-201ENST00000316399 FGFR1OP2Q9NVK5 253 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 ODF2LQ9ULJ1 636 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 PYCARDQ9ULZ3 195 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 PTPRMP28827 1452 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 BBOX1O75936 387 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 TMTC3Q6ZXV5 915 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 MB21D2Q8IYB1 491 aaPredicted RBP7.88□□□□□ -1.15
SOX6-201ENST00000316399 VPS52Q8N1B4 723 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 C3orf20Q8ND61 904 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 PCDHA12Q9UN75 941 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 USP17L12C9JPN9 530 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 USP17L21D6R901 530 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 PSMC2P35998 433 aaKnown RBP7.88□□□□□ -1.15
SOX6-201ENST00000316399 CHRNDQ07001 517 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 TTLL12Q14166 644 aaPredicted RBP7.88□□□□□ -1.15
SOX6-201ENST00000316399 NACC1Q96RE7 527 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 GPCPD1Q9NPB8 672 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 DISC1Q9NRI5 854 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 MRGBPQ9NV56 204 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 PTPN12Q05209 780 aaKnown RBP7.88□□□□□ -1.15
SOX6-201ENST00000316399 RCSD1Q6JBY9 416 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 ZNF594Q96JF6 807 aaPredicted RBP7.88□□□□□ -1.15
SOX6-201ENST00000316399 TRERF1Q96PN7 1200 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 MRPL47Q9HD33 250 aaKnown RBP7.88□□□□□ -1.15
SOX6-201ENST00000316399 VWDEQ8N2E2 1590 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 ABCB11O95342 1321 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 PDS5AQ29RF7 1337 aaKnown RBP7.88□□□□□ -1.15
SOX6-201ENST00000316399 ITIH6Q6UXX5 1313 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 KCNK3O14649 394 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 TTI1O43156 1089 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 KLHL7Q8IXQ5 586 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 MIPOL1Q8TD10 442 aa7.88□□□□□ -1.15
SOX6-201ENST00000316399 RRP15Q9Y3B9 282 aaKnown RBP7.88□□□□□ -1.15
SOX6-201ENST00000316399 TMEM110-MUSTN1A8MSY1 372 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 ADRA2BP18089 450 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 LTKP29376 864 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 CLCN6P51797 869 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 TERF2Q15554 542 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 BCAS4Q8TDM0 211 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 TTC25Q96NG3 672 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 DESI2Q9BSY9 194 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 HAUS8Q9BT25 410 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 MYL10Q9BUA6 226 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 PODXLO00592 558 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 KIAA0391O15091 583 aaKnown RBP7.87□□□□□ -1.15
SOX6-201ENST00000316399 HEXIM1O94992 359 aaKnown RBP7.87□□□□□ -1.15
SOX6-201ENST00000316399 NR2F2P24468 414 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 PABPC4Q13310 644 aaKnown RBP eCLIP7.87□□□□□ -1.15
SOX6-201ENST00000316399 KCNB1Q14721 858 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 FAM160B1Q5W0V3 765 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 PNMA8AQ86V59 439 aaPredicted RBP7.87□□□□□ -1.15
SOX6-201ENST00000316399 DCAF4Q8WV16 495 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 NT5C1BQ96P26 610 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 VPS37BQ9H9H4 285 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 KCND2Q9NZV8 630 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 ARHGEF37A1IGU5 675 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 SLC16A3O15427 465 aaKnown RBP7.87□□□□□ -1.15
SOX6-201ENST00000316399 ZNF131P52739 623 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 USPL1Q5W0Q7 1092 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 LMNAP02545 664 aaKnown RBP7.87□□□□□ -1.15
SOX6-201ENST00000316399 PNMA6AP0CW24 399 aaPredicted RBP7.87□□□□□ -1.15
SOX6-201ENST00000316399 ADCY8P40145 1251 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 CNKSR1Q969H4 720 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 PCDHA1Q9Y5I3 950 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 GGPS1O95749 300 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 LONRF3Q496Y0 759 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 MMS22LQ6ZRQ5 1243 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 KRT12Q99456 494 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 BLZF1Q9H2G9 400 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 CPDO75976 1380 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 ADD1P35611 737 aaKnown RBP7.87□□□□□ -1.15
SOX6-201ENST00000316399 GJC1P36383 396 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 PTK2Q05397 1052 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 UNC13DQ70J99 1090 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 NSMCE1Q8WV22 266 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 SLITRK6Q9H5Y7 841 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 VEZTQ9HBM0 779 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 PRR36Q9H6K5 1346 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 MYO3AQ8NEV4 1616 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 DIP2CQ9Y2E4 1556 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 CD2BP2O95400 341 aaKnown RBP7.87□□□□□ -1.15
SOX6-201ENST00000316399 TNNC2P02585 160 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 LRMPQ12912 555 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 NUF2Q9BZD4 464 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 CLIC4Q9Y696 253 aa7.87□□□□□ -1.15
SOX6-201ENST00000316399 SMAPO00193 183 aa7.86□□□□□ -1.15
SOX6-201ENST00000316399 ERCC3P19447 782 aa7.86□□□□□ -1.15
SOX6-201ENST00000316399 JAK3P52333 1124 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms