RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 KIFC2Q96AC6 838 aa12.9□□□□□ -0.34
LDLRAD3-201ENST00000315571 EPAS1Q99814 870 aa12.9□□□□□ -0.34
LDLRAD3-201ENST00000315571 EPN3Q9H201 632 aa12.9□□□□□ -0.34
LDLRAD3-201ENST00000315571 LMCD1Q9NZU5 365 aa12.9□□□□□ -0.34
LDLRAD3-201ENST00000315571 TTF2Q9UNY4 1162 aaKnown RBP12.9□□□□□ -0.34
LDLRAD3-201ENST00000315571 PDS5AQ29RF7 1337 aaKnown RBP12.9□□□□□ -0.34
LDLRAD3-201ENST00000315571 ZFYP08048 801 aaPredicted RBP12.9□□□□□ -0.35
LDLRAD3-201ENST00000315571 PAX3P23760 479 aa12.9□□□□□ -0.35
LDLRAD3-201ENST00000315571 FNTAP49354 379 aa12.9□□□□□ -0.35
LDLRAD3-201ENST00000315571 FAM133BQ5BKY9 247 aaKnown RBP12.9□□□□□ -0.35
LDLRAD3-201ENST00000315571 SLC9C2Q5TAH2 1124 aa12.9□□□□□ -0.35
LDLRAD3-201ENST00000315571 SPTY2D1Q68D10 685 aaPredicted RBP12.9□□□□□ -0.35
LDLRAD3-201ENST00000315571 ARHGAP27Q6ZUM4 889 aa12.9□□□□□ -0.35
LDLRAD3-201ENST00000315571 MFN1Q8IWA4 741 aa12.9□□□□□ -0.35
LDLRAD3-201ENST00000315571 ARL8AQ96BM9 186 aa12.9□□□□□ -0.35
LDLRAD3-201ENST00000315571 HVCN1Q96D96 273 aa12.9□□□□□ -0.35
LDLRAD3-201ENST00000315571 HDAC6Q9UBN7 1215 aa12.9□□□□□ -0.35
LDLRAD3-201ENST00000315571 PCDHA7Q9UN72 937 aa12.9□□□□□ -0.35
LDLRAD3-201ENST00000315571 RASSF10A6NK89 507 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 RNF113AO15541 343 aaKnown RBP12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 GUCY2FP51841 1108 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 USP14P54578 494 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 STX17P56962 302 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 SLC7A5Q01650 507 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 NMIQ13287 307 aaPredicted RBP12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 CCDC122Q5T0U0 273 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 NIM1KQ8IY84 436 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 IQCGQ9H095 443 aaKnown RBP12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 KIAA1551Q9HCM1 1747 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 ANKRD33BA6NCL7 494 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 SPTLC2O15270 562 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 PPP1R37O75864 691 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 KRT14P02533 472 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 IARSP41252 1262 aaKnown RBP12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 APBA1Q02410 837 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 AKNAD1Q5T1N1 836 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 RASIP1Q5U651 963 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 TCERG1LQ5VWI1 586 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 WHAMMQ8TF30 809 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 ABTB1Q969K4 478 aaPredicted RBP12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 RFX7Q2KHR2 1363 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 PRPF6O94906 941 aaKnown RBP12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 DESP17661 470 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 LACTBP83111 547 aaPredicted RBP12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 JDP2Q8WYK2 163 aa12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 LSG1Q9H089 658 aaKnown RBP12.89□□□□□ -0.35
LDLRAD3-201ENST00000315571 COL1A1P02452 1464 aaPredicted RBP12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 AHCYL1O43865 530 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 PAFAH1B1P43034 410 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 MFSD14BQ5SR56 506 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 DZIP1Q86YF9 867 aaKnown RBP12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 DDX27Q96GQ7 796 aaKnown RBP12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 CCDC43Q96MW1 224 aaKnown RBP12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 FAM184BQ9ULE4 1060 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 SNED1Q8TER0 1413 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 LTBP1Q14766 1721 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 NFKBIEO00221 500 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 COQ9O75208 318 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 LDHBP07195 334 aaKnown RBP12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 ATP11AP98196 1134 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 C2orf54Q08AI8 447 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 OTUD7BQ6GQQ9 843 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 SDCCAG8Q86SQ7 713 aaPredicted RBP12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 MAGEB6Q8N7X4 407 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 RNPC3Q96LT9 517 aaKnown RBP12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 FAM227BQ96M60 508 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 VPS33BQ9H267 617 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 ZSWIM6Q9HCJ5 1215 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 ERICH2A1L162 156 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 CETN3O15182 167 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 IDEP14735 1019 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 ROR2Q01974 943 aaKnown RBP12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 CCDC113Q9H0I3 377 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 C15orf41Q9Y2V0 281 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 ADGRG1Q9Y653 693 aa12.88□□□□□ -0.35
LDLRAD3-201ENST00000315571 PDE6AP16499 860 aa12.87□□□□□ -0.35
LDLRAD3-201ENST00000315571 RASSF7Q02833 373 aa12.87□□□□□ -0.35
LDLRAD3-201ENST00000315571 PNOCQ13519 176 aa12.87□□□□□ -0.35
LDLRAD3-201ENST00000315571 SLMAPQ14BN4 828 aa12.87□□□□□ -0.35
LDLRAD3-201ENST00000315571 CCDC38Q502W7 563 aa12.87□□□□□ -0.35
LDLRAD3-201ENST00000315571 MIS18BP1Q6P0N0 1132 aa12.87□□□□□ -0.35
LDLRAD3-201ENST00000315571 ZFATQ9P243 1243 aa12.87□□□□□ -0.35
LDLRAD3-201ENST00000315571 DACH1Q9UI36 760 aa12.87□□□□□ -0.35
LDLRAD3-201ENST00000315571 MACROD2A1Z1Q3 448 aa12.87□□□□□ -0.35
LDLRAD3-201ENST00000315571 FMNL1O95466 1100 aaPredicted RBP12.87□□□□□ -0.35
LDLRAD3-201ENST00000315571 AARSP49588 968 aaKnown RBP eCLIP12.87□□□□□ -0.35
LDLRAD3-201ENST00000315571 LONP2Q86WA8 852 aa12.87□□□□□ -0.35
LDLRAD3-201ENST00000315571 FBF1Q8TES7 1133 aa12.87□□□□□ -0.35
LDLRAD3-201ENST00000315571 VCXQ9H320 206 aa12.87□□□□□ -0.35
LDLRAD3-201ENST00000315571 A0A0D9SFI3 127 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 RASSF9O75901 435 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 ATP6V1G2O95670 118 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 RESTQ13127 1097 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 PLCB4Q15147 1175 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 CWF19L1Q69YN2 538 aaKnown RBP12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 MYCBPAPQ8TBZ2 947 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 RCOR1Q9UKL0 485 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 ZNF532Q9HCE3 1301 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 A0A0U1RQJ8 604 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms