RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 CST5P28325 142 aaPredicted RBP20.53■□□□□ 0.88
CCS-201ENST00000310190 CNGA1P29973 690 aa20.53■□□□□ 0.88
CCS-201ENST00000310190 MLLT1Q03111 559 aaPredicted RBP20.53■□□□□ 0.88
CCS-201ENST00000310190 PKN1Q16512 942 aa20.53■□□□□ 0.88
CCS-201ENST00000310190 XRRA1Q6P2D8 792 aa20.53■□□□□ 0.88
CCS-201ENST00000310190 GNEQ9Y223 722 aaKnown RBP20.53■□□□□ 0.88
CCS-201ENST00000310190 ADAMTS4O75173 837 aa20.52■□□□□ 0.88
CCS-201ENST00000310190 FARP2O94887 1054 aaPredicted RBP20.52■□□□□ 0.88
CCS-201ENST00000310190 NEK4P51957 841 aa20.52■□□□□ 0.88
CCS-201ENST00000310190 AK2P54819 239 aa20.52■□□□□ 0.88
CCS-201ENST00000310190 GJA9P57773 515 aa20.52■□□□□ 0.88
CCS-201ENST00000310190 WWC2Q6AWC2 1192 aa20.52■□□□□ 0.88
CCS-201ENST00000310190 VSIG10LQ86VR7 867 aa20.52■□□□□ 0.88
CCS-201ENST00000310190 CCDC82Q8N4S0 544 aa20.52■□□□□ 0.88
CCS-201ENST00000310190 KLHDC9Q8NEP7 349 aa20.52■□□□□ 0.88
CCS-201ENST00000310190 PDCD2LQ9BRP1 358 aa20.52■□□□□ 0.88
CCS-201ENST00000310190 TSEN34Q9BSV6 310 aaKnown RBP20.52■□□□□ 0.88
CCS-201ENST00000310190 PSTPIP2Q9H939 334 aa20.52■□□□□ 0.88
CCS-201ENST00000310190 TPCN1Q9ULQ1 816 aa20.52■□□□□ 0.88
CCS-201ENST00000310190 CEP290O15078 2479 aa20.52■□□□□ 0.88
CCS-201ENST00000310190 STXBP3O00186 592 aa20.51■□□□□ 0.87
CCS-201ENST00000310190 NKRFO15226 690 aaKnown RBP eCLIP20.51■□□□□ 0.87
CCS-201ENST00000310190 EIF3JO75822 258 aaKnown RBP20.51■□□□□ 0.87
CCS-201ENST00000310190 STAM2O75886 525 aa20.51■□□□□ 0.87
CCS-201ENST00000310190 NR3C2P08235 984 aa20.51■□□□□ 0.87
CCS-201ENST00000310190 SCG2P13521 617 aa20.51■□□□□ 0.87
CCS-201ENST00000310190 PDE4DQ08499 809 aa20.51■□□□□ 0.87
CCS-201ENST00000310190 STXBP2Q15833 593 aa20.51■□□□□ 0.87
CCS-201ENST00000310190 NECAB2Q7Z6G3 386 aa20.51■□□□□ 0.87
CCS-201ENST00000310190 RIC8AQ9NPQ8 531 aa20.51■□□□□ 0.87
CCS-201ENST00000310190 SH3GLB2Q9NR46 395 aa20.51■□□□□ 0.87
CCS-201ENST00000310190 ZHX1Q9UKY1 873 aaPredicted RBP20.51■□□□□ 0.87
CCS-201ENST00000310190 LRRC41Q15345 812 aa20.5■□□□□ 0.87
CCS-201ENST00000310190 DUSP28Q4G0W2 176 aa20.5■□□□□ 0.87
CCS-201ENST00000310190 MCTP2Q6DN12 878 aa20.5■□□□□ 0.87
CCS-201ENST00000310190 CCSAPQ6IQ19 270 aaPredicted RBP20.5■□□□□ 0.87
CCS-201ENST00000310190 TYW1BQ6NUM6 668 aa20.5■□□□□ 0.87
CCS-201ENST00000310190 CCDC62Q6P9F0 684 aa20.5■□□□□ 0.87
CCS-201ENST00000310190 CPLX2Q6PUV4 134 aaKnown RBP20.5■□□□□ 0.87
CCS-201ENST00000310190 SCFD2Q8WU76 684 aa20.5■□□□□ 0.87
CCS-201ENST00000310190 BACH2Q9BYV9 841 aa20.5■□□□□ 0.87
CCS-201ENST00000310190 ZMYND12Q9H0C1 365 aa20.5■□□□□ 0.87
CCS-201ENST00000310190 UPF2Q9HAU5 1272 aaKnown RBP20.5■□□□□ 0.87
CCS-201ENST00000310190 XPNPEP3Q9NQH7 507 aa20.5■□□□□ 0.87
CCS-201ENST00000310190 ADCY6O43306 1168 aa20.49■□□□□ 0.87
CCS-201ENST00000310190 TNFAIP2Q03169 654 aa20.49■□□□□ 0.87
CCS-201ENST00000310190 PGM5Q15124 567 aa20.49■□□□□ 0.87
CCS-201ENST00000310190 ARHGEF16Q5VV41 709 aa20.49■□□□□ 0.87
CCS-201ENST00000310190 CCDC12Q8WUD4 166 aaPredicted RBP20.49■□□□□ 0.87
CCS-201ENST00000310190 PIBF1Q8WXW3 757 aa20.49■□□□□ 0.87
CCS-201ENST00000310190 CUL5Q93034 780 aa20.49■□□□□ 0.87
CCS-201ENST00000310190 TBC1D32Q96NH3 1257 aa20.49■□□□□ 0.87
CCS-201ENST00000310190 NCOA5Q9HCD5 579 aaKnown RBP20.49■□□□□ 0.87
CCS-201ENST00000310190 NAP1L2Q9ULW6 460 aaPredicted RBP20.49■□□□□ 0.87
CCS-201ENST00000310190 STK36Q9NRP7 1315 aa20.49■□□□□ 0.87
CCS-201ENST00000310190 hCG_1642624A0A1W2PR95 340 aa20.48■□□□□ 0.87
CCS-201ENST00000310190 CTAGE5O15320 804 aa20.48■□□□□ 0.87
CCS-201ENST00000310190 CDKL5O76039 1030 aa20.48■□□□□ 0.87
CCS-201ENST00000310190 FOSP01100 380 aaPredicted RBP20.48■□□□□ 0.87
CCS-201ENST00000310190 TGFB3P10600 412 aa20.48■□□□□ 0.87
CCS-201ENST00000310190 HOXA13P31271 388 aaPredicted RBP20.48■□□□□ 0.87
CCS-201ENST00000310190 CLK2P49760 499 aaKnown RBP20.48■□□□□ 0.87
CCS-201ENST00000310190 CCT2P78371 535 aaKnown RBP20.48■□□□□ 0.87
CCS-201ENST00000310190 SCRN1Q12765 414 aa20.48■□□□□ 0.87
CCS-201ENST00000310190 RABEP1Q15276 862 aa20.48■□□□□ 0.87
CCS-201ENST00000310190 C1orf53Q5VUE5 145 aa20.48■□□□□ 0.87
CCS-201ENST00000310190 KCNV1Q6PIU1 500 aa20.48■□□□□ 0.87
CCS-201ENST00000310190 HEATR3Q7Z4Q2 680 aa20.48■□□□□ 0.87
CCS-201ENST00000310190 RNF180Q86T96 592 aa20.48■□□□□ 0.87
CCS-201ENST00000310190 FBXO16Q8IX29 292 aaPredicted RBP20.48■□□□□ 0.87
CCS-201ENST00000310190 PAWRQ96IZ0 340 aaKnown RBP20.48■□□□□ 0.87
CCS-201ENST00000310190 SLKQ9H2G2 1235 aaPredicted RBP20.48■□□□□ 0.87
CCS-201ENST00000310190 PHF24Q9UPV7 400 aa20.48■□□□□ 0.87
CCS-201ENST00000310190 SYNRGQ9UMZ2 1314 aa20.48■□□□□ 0.87
CCS-201ENST00000310190 DEXIO95424 95 aa20.47■□□□□ 0.87
CCS-201ENST00000310190 SMPD1P17405 629 aa20.47■□□□□ 0.87
CCS-201ENST00000310190 ADCYAP1R1P41586 468 aa20.47■□□□□ 0.87
CCS-201ENST00000310190 NAPAP54920 295 aa20.47■□□□□ 0.87
CCS-201ENST00000310190 PCNX4Q63HM2 1172 aa20.47■□□□□ 0.87
CCS-201ENST00000310190 USP17L6PQ6QN14 398 aa20.47■□□□□ 0.87
CCS-201ENST00000310190 TRIM22Q8IYM9 498 aa20.47■□□□□ 0.87
CCS-201ENST00000310190 GPKOWQ92917 476 aaPredicted RBP eCLIP20.47■□□□□ 0.876e-7■■□□□ 13.9
CCS-201ENST00000310190 GTF3C6Q969F1 213 aa20.47■□□□□ 0.87
CCS-201ENST00000310190 INPP4AQ96PE3 977 aaPredicted RBP20.47■□□□□ 0.87
CCS-201ENST00000310190 HTATIP2Q9BUP3 242 aa20.47■□□□□ 0.87
CCS-201ENST00000310190 C11orf49Q9H6J7 331 aa20.47■□□□□ 0.87
CCS-201ENST00000310190 PDGFCQ9NRA1 345 aa20.47■□□□□ 0.87
CCS-201ENST00000310190 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.46■□□□□ 0.87
CCS-201ENST00000310190 MOXD2PA6NHM9 499 aa20.46■□□□□ 0.87
CCS-201ENST00000310190 CPLX1O14810 134 aa20.46■□□□□ 0.87
CCS-201ENST00000310190 RGS20O76081 388 aa20.46■□□□□ 0.87
CCS-201ENST00000310190 EIF2AK2P19525 551 aaKnown RBP20.46■□□□□ 0.87
CCS-201ENST00000310190 ICAM3P32942 547 aa20.46■□□□□ 0.87
CCS-201ENST00000310190 AKAP17AQ02040 695 aaKnown RBP20.46■□□□□ 0.87
CCS-201ENST00000310190 SSRP1Q08945 709 aaKnown RBP20.46■□□□□ 0.87
CCS-201ENST00000310190 AP3B2Q13367 1082 aa20.46■□□□□ 0.87
CCS-201ENST00000310190 ME3Q16798 604 aa20.46■□□□□ 0.87
CCS-201ENST00000310190 SMARCC2Q8TAQ2 1214 aa20.46■□□□□ 0.87
CCS-201ENST00000310190 PHKBQ93100 1093 aa20.46■□□□□ 0.87
CCS-201ENST00000310190 EMID1Q96A84 441 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms