RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 POLLQ9UGP5 575 aa16.86■□□□□ 0.29
CSDC2-201ENST00000306149 PDHBP11177 359 aa16.85■□□□□ 0.29
CSDC2-201ENST00000306149 CYLC1P35663 651 aaPredicted RBP16.85■□□□□ 0.29
CSDC2-201ENST00000306149 UBE2SQ16763 222 aa16.85■□□□□ 0.29
CSDC2-201ENST00000306149 KCNK18Q7Z418 384 aa16.85■□□□□ 0.29
CSDC2-201ENST00000306149 GGA1Q9UJY5 639 aa16.85■□□□□ 0.29
CSDC2-201ENST00000306149 LRRIQ3A6PVS8 624 aaPredicted RBP16.85■□□□□ 0.29
CSDC2-201ENST00000306149 KRT86O43790 486 aa16.85■□□□□ 0.29
CSDC2-201ENST00000306149 LMAN1P49257 510 aa16.85■□□□□ 0.29
CSDC2-201ENST00000306149 AMPD3Q01432 767 aa16.85■□□□□ 0.29
CSDC2-201ENST00000306149 CNNM4Q6P4Q7 775 aa16.85■□□□□ 0.29
CSDC2-201ENST00000306149 ZNF662Q6ZS27 426 aa16.85■□□□□ 0.29
CSDC2-201ENST00000306149 GOLGA5Q8TBA6 731 aa16.85■□□□□ 0.29
CSDC2-201ENST00000306149 DRC1Q96MC2 740 aa16.85■□□□□ 0.29
CSDC2-201ENST00000306149 DDX60LQ5H9U9 1706 aaKnown RBP16.85■□□□□ 0.29
CSDC2-201ENST00000306149 C6orf229H3BNL8 230 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 RIMBP2O15034 1052 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 IPO7O95373 1038 aaKnown RBP16.84■□□□□ 0.29
CSDC2-201ENST00000306149 AKR1B1P15121 316 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 TNNI2P48788 182 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 VPS72Q15906 364 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 ZSCAN26Q16670 478 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 AEBP2Q6ZN18 517 aaPredicted RBP16.84■□□□□ 0.29
CSDC2-201ENST00000306149 CCDC155Q8N6L0 562 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 CDK5RAP3Q96JB5 506 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 MTMR9Q96QG7 549 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 MMRN2Q9H8L6 949 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 GTF2IP78347 998 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 RAD51AP2Q09MP3 1159 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 FKBP15Q5T1M5 1219 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 C2CD5Q86YS7 1000 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 FAM114A1Q8IWE2 563 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 CCDC102AQ96A19 550 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 NUP58Q9BVL2 599 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 MAGEF1Q9HAY2 307 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 JADE2Q9NQC1 790 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 BTAF1O14981 1849 aa16.84■□□□□ 0.29
CSDC2-201ENST00000306149 PDE2AO00408 941 aaPredicted RBP16.83■□□□□ 0.29
CSDC2-201ENST00000306149 NT5C2P49902 561 aa16.83■□□□□ 0.29
CSDC2-201ENST00000306149 DPP8Q6V1X1 898 aaPredicted RBP16.83■□□□□ 0.29
CSDC2-201ENST00000306149 LARP4BQ92615 738 aaKnown RBP16.83■□□□□ 0.29
CSDC2-201ENST00000306149 CCDC42Q96M95 316 aa16.83■□□□□ 0.29
CSDC2-201ENST00000306149 RIOX1Q9H6W3 641 aa16.83■□□□□ 0.29
CSDC2-201ENST00000306149 FAN1Q9Y2M0 1017 aa16.83■□□□□ 0.29
CSDC2-201ENST00000306149 CDK5RAP2Q96SN8 1893 aa16.83■□□□□ 0.29
CSDC2-201ENST00000306149 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.83■□□□□ 0.28
CSDC2-201ENST00000306149 SLC16A2P36021 539 aa16.83■□□□□ 0.28
CSDC2-201ENST00000306149 CCDC96Q2M329 555 aa16.83■□□□□ 0.28
CSDC2-201ENST00000306149 PAPD7Q5XG87 772 aaKnown RBP16.83■□□□□ 0.28
CSDC2-201ENST00000306149 CENPPQ6IPU0 288 aa16.83■□□□□ 0.28
CSDC2-201ENST00000306149 TTBK2Q6IQ55 1244 aa16.83■□□□□ 0.28
CSDC2-201ENST00000306149 GSPT2Q8IYD1 628 aaKnown RBP16.83■□□□□ 0.28
CSDC2-201ENST00000306149 SNX29Q8TEQ0 813 aa16.83■□□□□ 0.28
CSDC2-201ENST00000306149 LRRC4BQ9NT99 713 aa16.83■□□□□ 0.28
CSDC2-201ENST00000306149 MTMR4Q9NYA4 1195 aa16.83■□□□□ 0.28
CSDC2-201ENST00000306149 EIF3CLB5ME19 914 aaKnown RBP16.83■□□□□ 0.28
CSDC2-201ENST00000306149 ZBTB22O15209 634 aa16.83■□□□□ 0.28
CSDC2-201ENST00000306149 IL1R1P14778 569 aa16.83■□□□□ 0.28
CSDC2-201ENST00000306149 ADCY7P51828 1080 aa16.83■□□□□ 0.28
CSDC2-201ENST00000306149 USP14P54578 494 aa16.83■□□□□ 0.28
CSDC2-201ENST00000306149 MRPS25P82663 173 aaKnown RBP16.83■□□□□ 0.28
CSDC2-201ENST00000306149 ECM1Q16610 540 aa16.83■□□□□ 0.28
CSDC2-201ENST00000306149 ZSCAN29Q8IWY8 852 aaPredicted RBP16.83■□□□□ 0.28
CSDC2-201ENST00000306149 CAGE1Q8TC20 777 aa16.83■□□□□ 0.28
CSDC2-201ENST00000306149 ERGIC2Q96RQ1 377 aa16.83■□□□□ 0.28
CSDC2-201ENST00000306149 EIF3CQ99613 913 aaKnown RBP16.83■□□□□ 0.28
CSDC2-201ENST00000306149 MXD3Q9BW11 206 aa16.83■□□□□ 0.28
CSDC2-201ENST00000306149 NDST4Q9H3R1 872 aa16.83■□□□□ 0.28
CSDC2-201ENST00000306149 ARHGAP20Q9P2F6 1191 aa16.83■□□□□ 0.28
CSDC2-201ENST00000306149 MYH10P35580 1976 aa16.82■□□□□ 0.28
CSDC2-201ENST00000306149 VWA3BQ502W6 1294 aa16.82■□□□□ 0.28
CSDC2-201ENST00000306149 RETREG2Q8NC44 543 aa16.82■□□□□ 0.28
CSDC2-201ENST00000306149 EHBP1Q8NDI1 1231 aa16.82■□□□□ 0.28
CSDC2-201ENST00000306149 FAM71BQ8TC56 605 aa16.82■□□□□ 0.28
CSDC2-201ENST00000306149 PSMB7Q99436 277 aa16.82■□□□□ 0.28
CSDC2-201ENST00000306149 TSPYL1Q9H0U9 437 aa16.82■□□□□ 0.28
CSDC2-201ENST00000306149 ACBD3Q9H3P7 528 aa16.82■□□□□ 0.28
CSDC2-201ENST00000306149 MLXIPQ9HAP2 919 aa16.82■□□□□ 0.28
CSDC2-201ENST00000306149 CWC15Q9P013 229 aaKnown RBP16.82■□□□□ 0.28
CSDC2-201ENST00000306149 DAGLAQ9Y4D2 1042 aa16.82■□□□□ 0.28
CSDC2-201ENST00000306149 KIF5AQ12840 1032 aa16.82■□□□□ 0.28
CSDC2-201ENST00000306149 ANKRD13CQ8N6S4 541 aa16.82■□□□□ 0.28
CSDC2-201ENST00000306149 TBC1D16Q8TBP0 767 aa16.82■□□□□ 0.28
CSDC2-201ENST00000306149 DDX12PQ92771 950 aa16.82■□□□□ 0.28
CSDC2-201ENST00000306149 TBC1D7Q9P0N9 293 aa16.82■□□□□ 0.28
CSDC2-201ENST00000306149 RAD21O60216 631 aa16.81■□□□□ 0.28
CSDC2-201ENST00000306149 PPP1R11O60927 126 aaPredicted RBP16.81■□□□□ 0.28
CSDC2-201ENST00000306149 SSBP05455 408 aaKnown RBP eCLIP16.81■□□□□ 0.28
CSDC2-201ENST00000306149 ATP2B4P23634 1241 aa16.81■□□□□ 0.28
CSDC2-201ENST00000306149 UNC13DQ70J99 1090 aa16.81■□□□□ 0.28
CSDC2-201ENST00000306149 CCDC170Q8IYT3 715 aa16.81■□□□□ 0.28
CSDC2-201ENST00000306149 MED4Q9NPJ6 270 aa16.81■□□□□ 0.28
CSDC2-201ENST00000306149 DDX4Q9NQI0 724 aaKnown RBP16.81■□□□□ 0.28
CSDC2-201ENST00000306149 CAPN6Q9Y6Q1 641 aa16.81■□□□□ 0.28
CSDC2-201ENST00000306149 PLCG2P16885 1265 aa16.81■□□□□ 0.28
CSDC2-201ENST00000306149 CAPN2P17655 700 aa16.81■□□□□ 0.28
CSDC2-201ENST00000306149 MCM3P25205 808 aa16.81■□□□□ 0.28
CSDC2-201ENST00000306149 ACTN2P35609 894 aa16.81■□□□□ 0.28
CSDC2-201ENST00000306149 TNNT3P45378 269 aaPredicted RBP16.81■□□□□ 0.28
CSDC2-201ENST00000306149 C2orf54Q08AI8 447 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms