RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 TTLL1O95922 423 aa22.26■■□□□ 1.15
SCUBE1-201ENST00000290460 ZNF543Q08ER8 600 aa22.26■■□□□ 1.15
SCUBE1-201ENST00000290460 ORC2Q13416 577 aaPredicted RBP22.26■■□□□ 1.15
SCUBE1-201ENST00000290460 TUBB2AQ13885 445 aa22.26■■□□□ 1.15
SCUBE1-201ENST00000290460 DOK7Q18PE1 504 aa22.26■■□□□ 1.15
SCUBE1-201ENST00000290460 TMEM266Q2M3C6 531 aa22.26■■□□□ 1.15
SCUBE1-201ENST00000290460 SNX29Q8TEQ0 813 aa22.26■■□□□ 1.15
SCUBE1-201ENST00000290460 TUBB2BQ9BVA1 445 aa22.26■■□□□ 1.15
SCUBE1-201ENST00000290460 HAUS4Q9H6D7 363 aa22.26■■□□□ 1.15
SCUBE1-201ENST00000290460 ZCCHC17Q9NP64 241 aaKnown RBP22.26■■□□□ 1.15
SCUBE1-201ENST00000290460 USP40Q9NVE5 1235 aa22.26■■□□□ 1.15
SCUBE1-201ENST00000290460 CTAGE15A4D2H0 777 aa22.25■■□□□ 1.15
SCUBE1-201ENST00000290460 CTAGE8P0CG41 777 aa22.25■■□□□ 1.15
SCUBE1-201ENST00000290460 IDEP14735 1019 aa22.25■■□□□ 1.15
SCUBE1-201ENST00000290460 WHAMMP3Q1A5X7 153 aa22.25■■□□□ 1.15
SCUBE1-201ENST00000290460 KCTD1Q719H9 257 aa22.25■■□□□ 1.15
SCUBE1-201ENST00000290460 CTAGE6Q86UF2 777 aa22.25■■□□□ 1.15
SCUBE1-201ENST00000290460 CTAGE4Q8IX94 777 aa22.25■■□□□ 1.15
SCUBE1-201ENST00000290460 NOA1Q8NC60 698 aaKnown RBP22.25■■□□□ 1.15
SCUBE1-201ENST00000290460 GLIS3Q8NEA6 775 aa22.25■■□□□ 1.15
SCUBE1-201ENST00000290460 UBXN6Q9BZV1 441 aa22.25■■□□□ 1.15
SCUBE1-201ENST00000290460 NHEJ1Q9H9Q4 299 aaPredicted RBP22.25■■□□□ 1.15
SCUBE1-201ENST00000290460 MPHOSPH10O00566 681 aaKnown RBP22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 SHMT1P34896 483 aa22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 CENPPQ6IPU0 288 aa22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 ZSCAN29Q8IWY8 852 aaPredicted RBP22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 LACRTQ9GZZ8 138 aa22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 STK17AQ9UEE5 414 aa22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 ANKRD31Q8N7Z5 1873 aa22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 PNMA6FA0A0J9YX94 578 aa22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 ZBED6P86452 979 aa22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 CYP27A1Q02318 531 aa22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 BRD3Q15059 726 aa22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 ECM1Q16610 540 aa22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 UNC13DQ70J99 1090 aa22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 KIAA1328Q86T90 577 aa22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 SP8Q8IXZ3 490 aa22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 MSANTD4Q8NCY6 345 aa22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 NUP58Q9BVL2 599 aa22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 COA1Q9GZY4 146 aa22.24■■□□□ 1.15
SCUBE1-201ENST00000290460 ATP1A1P05023 1023 aaKnown RBP22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 OAS2P29728 719 aaKnown RBP22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 SMC1AQ14683 1233 aaKnown RBP22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 CCDC96Q2M329 555 aa22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 GPIHBP1Q8IV16 184 aa22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 RAD54LQ92698 747 aa22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 RIC8AQ9NPQ8 531 aa22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 DUSP10Q9Y6W6 482 aa22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 ARFGEF1Q9Y6D6 1849 aa22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 AFF2P51816 1311 aa22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 SPATA31A6Q5VVP1 1343 aa22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 USP17L10C9JJH3 530 aa22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 PSMD14O00487 310 aa22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 EPHB6O15197 1021 aa22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 PLEKP08567 350 aaPredicted RBP22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 LRRC41Q15345 812 aa22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 RETREG2Q8NC44 543 aa22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 ERGIC2Q96RQ1 377 aa22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 SUGCTQ9HAC7 445 aa22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 ZNHIT6Q9NWK9 470 aaKnown RBP22.23■■□□□ 1.15
SCUBE1-201ENST00000290460 KLRG2A4D1S0 409 aaPredicted RBP22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 SRGAP2O75044 1071 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 PPP1R2P41236 205 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 NFIAQ12857 509 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 COBLL1Q53SF7 1204 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 KRT79Q5XKE5 535 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 TRAPPC11Q7Z392 1133 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 DDX12PQ92771 950 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 JAKMIP2Q96AA8 810 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 ZC3H12CQ9C0D7 883 aaKnown RBP22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 RAB21Q9UL25 225 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 ATP6V0A2Q9Y487 856 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 ERICH4A6NGS2 130 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 RAD21O60216 631 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 CYLC1P35663 651 aaPredicted RBP22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 VSNL1P62760 191 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 KRT83P78385 493 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 SHROOM1Q2M3G4 852 aaPredicted RBP22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 BEND6Q5SZJ8 279 aaPredicted RBP22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 FKBP15Q5T1M5 1219 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 CDC42EP5Q6NZY7 148 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 HAS1Q92839 578 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 RAB34Q9BZG1 259 aa22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 FAM207AQ9NSI2 230 aaPredicted RBP22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 DDX25Q9UHL0 483 aaKnown RBP22.22■■□□□ 1.15
SCUBE1-201ENST00000290460 PDIA5Q14554 519 aa22.21■■□□□ 1.15
SCUBE1-201ENST00000290460 ZFPM1Q8IX07 1006 aa22.21■■□□□ 1.15
SCUBE1-201ENST00000290460 MYH10P35580 1976 aa22.21■■□□□ 1.15
SCUBE1-201ENST00000290460 QSER1Q2KHR3 1735 aa22.21■■□□□ 1.15
SCUBE1-201ENST00000290460 PVALEFA0A1B0GWK0 134 aa22.2■■□□□ 1.15
SCUBE1-201ENST00000290460 FAM196BA6NMK8 535 aa22.2■■□□□ 1.15
SCUBE1-201ENST00000290460 CLK2P49760 499 aaKnown RBP22.2■■□□□ 1.15
SCUBE1-201ENST00000290460 KRT26Q7Z3Y9 468 aa22.2■■□□□ 1.15
SCUBE1-201ENST00000290460 NDST4Q9H3R1 872 aa22.2■■□□□ 1.15
SCUBE1-201ENST00000290460 ABCB6Q9NP58 842 aa22.2■■□□□ 1.15
SCUBE1-201ENST00000290460 RNF216Q9NWF9 866 aaPredicted RBP22.2■■□□□ 1.15
SCUBE1-201ENST00000290460 VWA3BQ502W6 1294 aa22.2■■□□□ 1.14
SCUBE1-201ENST00000290460 CUL5Q93034 780 aa22.2■■□□□ 1.14
SCUBE1-201ENST00000290460 SWAP70Q9UH65 585 aa22.2■■□□□ 1.14
SCUBE1-201ENST00000290460 MACROD2A1Z1Q3 448 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms