RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 EAF2Q96CJ1 260 aaPredicted RBP18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 PCDHA5Q9Y5H7 936 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 KIAA0825Q8IV33 1275 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 PARD6BQ9BYG5 372 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 CCDC68Q9H2F9 335 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 ZC4H2Q9NQZ6 224 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 RFX1P22670 979 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 PRAG1Q86YV5 1406 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 SUPT20HQ8NEM7 779 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 DSCC1Q9BVC3 393 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 KDM3AQ9Y4C1 1321 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 NVLO15381 856 aaKnown RBP18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 TTC4O95801 387 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 KITP10721 976 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 PARD3BQ8TEW8 1205 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 SLC52A2Q9HAB3 445 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 MLXIPLQ9NP71 852 aa18.28■□□□□ 0.52
TSPAN3-201ENST00000267970 NEURL1BA8MQ27 555 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 M0R2C6 588 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 NSFP46459 744 aaKnown RBP18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 POLGP54098 1239 aaPredicted RBP18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 RSBN1LQ6PCB5 846 aaPredicted RBP18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 RFX8Q6ZV50 586 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 NEK8Q86SG6 692 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 KIF9Q9HAQ2 790 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 A6NJR5 290 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 SRGAP2O75044 1071 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 TMEM191BP0C7N4 346 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 KRT10P13645 584 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 PDIA3P30101 505 aaKnown RBP18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 ERFP50548 548 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 ZBTB17Q13105 803 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 PLA2G4DQ86XP0 818 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 KLHL29Q96CT2 875 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 ARPP21Q9UBL0 812 aaPredicted RBP18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 SEPT9Q9UHD8 586 aaPredicted RBP18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 ADCY9O60503 1353 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 TCP1P17987 556 aaKnown RBP18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 DHX9Q08211 1270 aaKnown RBP18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 NKX1-1Q15270 411 aaPredicted RBP18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 SGO2Q562F6 1265 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 TTLL7Q6ZT98 887 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 ZBTB33Q86T24 672 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 TBC1D1Q86TI0 1168 aaPredicted RBP18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 NCAPG2Q86XI2 1143 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 ANGPTL3Q9Y5C1 460 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 PTPRKQ15262 1439 aa18.27■□□□□ 0.52
TSPAN3-201ENST00000267970 CMA1P23946 247 aa18.27■□□□□ 0.51
TSPAN3-201ENST00000267970 LRRC23Q53EV4 343 aaPredicted RBP18.27■□□□□ 0.51
TSPAN3-201ENST00000267970 TYW1Q9NV66 732 aaKnown RBP18.27■□□□□ 0.51
TSPAN3-201ENST00000267970 MAPK4P31152 587 aa18.27■□□□□ 0.51
TSPAN3-201ENST00000267970 CYP27A1Q02318 531 aa18.27■□□□□ 0.51
TSPAN3-201ENST00000267970 RPGRIP1Q96KN7 1286 aa18.27■□□□□ 0.51
TSPAN3-201ENST00000267970 CDC23Q9UJX2 597 aa18.27■□□□□ 0.51
TSPAN3-201ENST00000267970 GSTA4O15217 222 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 BRDTQ58F21 947 aaPredicted RBP18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 CCDC138Q96M89 665 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 YTHDC2Q9H6S0 1430 aaKnown RBP18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 DKC1O60832 514 aaKnown RBP eCLIP18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 LUC7L3O95232 432 aaKnown RBP18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 SCG2P13521 617 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 SCARA5Q6ZMJ2 495 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 TESK2Q96S53 571 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 H7C1D1 291 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 DMP1Q13316 513 aaPredicted RBP18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 RINT1Q6NUQ1 792 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 ANAPC5Q9UJX4 755 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 MYCP01106 439 aaPredicted RBP18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 ODR4Q5SWX8 454 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 TEKT1Q969V4 418 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 ZNF496Q96IT1 587 aaPredicted RBP18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 SYNDIG1LA6NDD5 238 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 GTPBP6O43824 516 aaPredicted RBP18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 PFKFB2O60825 505 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 ACSL3O95573 720 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 PLS3P13797 630 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 CLCN6P51797 869 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 CEP70Q8NHQ1 597 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 DYDC2Q96IM9 177 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 PUS3Q9BZE2 481 aaKnown RBP18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 HAUS4Q9H6D7 363 aa18.26■□□□□ 0.51
TSPAN3-201ENST00000267970 PDHA1P08559 390 aa18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 ARPP19P56211 112 aa18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 TSR3Q9UJK0 312 aaKnown RBP18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 CD58P19256 250 aa18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 GARSP41250 739 aaKnown RBP18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 MAN1B1Q9UKM7 699 aa18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 MSH2P43246 934 aa18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 C10orf76Q5T2E6 689 aa18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 ZSWIM6Q9HCJ5 1215 aa18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 MED4Q9NPJ6 270 aa18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 DNAAF3Q8N9W5 541 aa18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 NR2F2P24468 414 aa18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 CTSWP56202 376 aa18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 FAM26FQ5R3K3 315 aa18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 HIBCHQ6NVY1 386 aaPredicted RBP18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 C7orf31Q8N865 590 aa18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 LBHD1Q9BQE6 289 aaPredicted RBP18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 DAAM1Q9Y4D1 1078 aa18.25■□□□□ 0.51
TSPAN3-201ENST00000267970 TMEM232C9JQI7 657 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms