RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 VAV2P52735 878 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 CKAP4Q07065 602 aaKnown RBP16.97■□□□□ 0.31
DDX56-201ENST00000258772 KIF5AQ12840 1032 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 CALCRLQ16602 461 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 CNBD1Q8NA66 436 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 FAM163AQ96GL9 167 aaPredicted RBP16.97■□□□□ 0.31
DDX56-201ENST00000258772 CCDC42Q96M95 316 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 PNMA5Q96PV4 448 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 STK17AQ9UEE5 414 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 MYH10P35580 1976 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 hCG_1984214I3L0E3 225 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 MCM3P25205 808 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 VWA3BQ502W6 1294 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 MUM1L1Q5H9M0 696 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 TRAPPC3LQ5T215 181 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 ZNF713Q8N859 430 aaPredicted RBP16.97■□□□□ 0.31
DDX56-201ENST00000258772 LARP4BQ92615 738 aaKnown RBP16.97■□□□□ 0.31
DDX56-201ENST00000258772 NDST4Q9H3R1 872 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 RNF216Q9NWF9 866 aaPredicted RBP16.97■□□□□ 0.31
DDX56-201ENST00000258772 SIK3Q9Y2K2 1263 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 FAN1Q9Y2M0 1017 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 MACROD2A1Z1Q3 448 aa16.96■□□□□ 0.31
DDX56-201ENST00000258772 EDIL3O43854 480 aa16.96■□□□□ 0.31
DDX56-201ENST00000258772 UFL1O94874 794 aa16.96■□□□□ 0.31
DDX56-201ENST00000258772 PLEKP08567 350 aaPredicted RBP16.96■□□□□ 0.31
DDX56-201ENST00000258772 PDHBP11177 359 aa16.96■□□□□ 0.31
DDX56-201ENST00000258772 SPA17Q15506 151 aa16.96■□□□□ 0.31
DDX56-201ENST00000258772 COA7Q96BR5 231 aa16.96■□□□□ 0.31
DDX56-201ENST00000258772 TARSL2A2RTX5 802 aaKnown RBP16.96■□□□□ 0.3
DDX56-201ENST00000258772 SLC37A4O43826 429 aa16.96■□□□□ 0.3
DDX56-201ENST00000258772 PDIA5Q14554 519 aa16.96■□□□□ 0.3
DDX56-201ENST00000258772 VPS72Q15906 364 aa16.96■□□□□ 0.3
DDX56-201ENST00000258772 HSP90B2PQ58FF3 399 aa16.96■□□□□ 0.3
DDX56-201ENST00000258772 MFSD14BQ5SR56 506 aa16.96■□□□□ 0.3
DDX56-201ENST00000258772 DYMQ7RTS9 669 aa16.96■□□□□ 0.3
DDX56-201ENST00000258772 KRT26Q7Z3Y9 468 aa16.96■□□□□ 0.3
DDX56-201ENST00000258772 GUF1Q8N442 669 aaKnown RBP16.96■□□□□ 0.3
DDX56-201ENST00000258772 FAM71BQ8TC56 605 aa16.96■□□□□ 0.3
DDX56-201ENST00000258772 SECISBP2LQ93073 1101 aaKnown RBP16.96■□□□□ 0.3
DDX56-201ENST00000258772 CCDC102AQ96A19 550 aa16.96■□□□□ 0.3
DDX56-201ENST00000258772 TSGA10Q9BZW7 698 aa16.96■□□□□ 0.3
DDX56-201ENST00000258772 ACBD3Q9H3P7 528 aa16.96■□□□□ 0.3
DDX56-201ENST00000258772 VIPAS39Q9H9C1 493 aa16.96■□□□□ 0.3
DDX56-201ENST00000258772 FRMPD2Q68DX3 1309 aaPredicted RBP16.95■□□□□ 0.3
DDX56-201ENST00000258772 PDE2AO00408 941 aaPredicted RBP16.95■□□□□ 0.3
DDX56-201ENST00000258772 ZNF185O15231 689 aa16.95■□□□□ 0.3
DDX56-201ENST00000258772 IDEP14735 1019 aa16.95■□□□□ 0.3
DDX56-201ENST00000258772 ATP2B4P23634 1241 aa16.95■□□□□ 0.3
DDX56-201ENST00000258772 ZSCAN26Q16670 478 aa16.95■□□□□ 0.3
DDX56-201ENST00000258772 TMEM266Q2M3C6 531 aa16.95■□□□□ 0.3
DDX56-201ENST00000258772 CDK5RAP3Q96JB5 506 aa16.95■□□□□ 0.3
DDX56-201ENST00000258772 JADE2Q9NQC1 790 aa16.95■□□□□ 0.3
DDX56-201ENST00000258772 ARHGAP20Q9P2F6 1191 aa16.95■□□□□ 0.3
DDX56-201ENST00000258772 TAF1LQ8IZX4 1826 aa16.95■□□□□ 0.3
DDX56-201ENST00000258772 EPHB6O15197 1021 aa16.95■□□□□ 0.3
DDX56-201ENST00000258772 TDP2O95551 362 aa16.95■□□□□ 0.3
DDX56-201ENST00000258772 ADCY7P51828 1080 aa16.95■□□□□ 0.3
DDX56-201ENST00000258772 MAN2A1Q16706 1144 aa16.95■□□□□ 0.3
DDX56-201ENST00000258772 C2CD5Q86YS7 1000 aa16.95■□□□□ 0.3
DDX56-201ENST00000258772 SLF2Q8IX21 1173 aa16.95■□□□□ 0.3
DDX56-201ENST00000258772 RPGRQ92834 1020 aaKnown RBP16.95■□□□□ 0.3
DDX56-201ENST00000258772 MTMR4Q9NYA4 1195 aa16.95■□□□□ 0.3
DDX56-201ENST00000258772 GGA1Q9UJY5 639 aa16.95■□□□□ 0.3
DDX56-201ENST00000258772 ABCB11O95342 1321 aa16.94■□□□□ 0.3
DDX56-201ENST00000258772 USO1O60763 962 aaKnown RBP16.94■□□□□ 0.3
DDX56-201ENST00000258772 FGFR1OPO95684 399 aaKnown RBP16.94■□□□□ 0.3
DDX56-201ENST00000258772 CCDC96Q2M329 555 aa16.94■□□□□ 0.3
DDX56-201ENST00000258772 MAP9Q49MG5 647 aa16.94■□□□□ 0.3
DDX56-201ENST00000258772 CCDC84Q86UT8 332 aaPredicted RBP16.94■□□□□ 0.3
DDX56-201ENST00000258772 RAD54LQ92698 747 aa16.94■□□□□ 0.3
DDX56-201ENST00000258772 NUDT12Q9BQG2 462 aa16.94■□□□□ 0.3
DDX56-201ENST00000258772 RAB34Q9BZG1 259 aa16.94■□□□□ 0.3
DDX56-201ENST00000258772 MED4Q9NPJ6 270 aa16.94■□□□□ 0.3
DDX56-201ENST00000258772 FAM207AQ9NSI2 230 aaPredicted RBP16.94■□□□□ 0.3
DDX56-201ENST00000258772 PCDHA13Q9Y5I0 950 aa16.94■□□□□ 0.3
DDX56-201ENST00000258772 GAKO14976 1311 aa16.94■□□□□ 0.3
DDX56-201ENST00000258772 POTEMA6NI47 508 aa16.93■□□□□ 0.3
DDX56-201ENST00000258772 LRRC63Q05C16 580 aa16.93■□□□□ 0.3
DDX56-201ENST00000258772 PRR5LQ6MZQ0 368 aa16.93■□□□□ 0.3
DDX56-201ENST00000258772 TRIM58Q8NG06 486 aa16.93■□□□□ 0.3
DDX56-201ENST00000258772 CAGE1Q8TC20 777 aa16.93■□□□□ 0.3
DDX56-201ENST00000258772 IFIH1Q9BYX4 1025 aaKnown RBP16.93■□□□□ 0.3
DDX56-201ENST00000258772 MMRN2Q9H8L6 949 aa16.93■□□□□ 0.3
DDX56-201ENST00000258772 JRKLQ9Y4A0 524 aa16.93■□□□□ 0.3
DDX56-201ENST00000258772 ACTN2P35609 894 aa16.93■□□□□ 0.3
DDX56-201ENST00000258772 ASPRV1Q53RT3 343 aa16.93■□□□□ 0.3
DDX56-201ENST00000258772 FAM182BQ5T319 152 aa16.93■□□□□ 0.3
DDX56-201ENST00000258772 KRT79Q5XKE5 535 aa16.93■□□□□ 0.3
DDX56-201ENST00000258772 FNBP4Q8N3X1 1017 aaPredicted RBP16.93■□□□□ 0.3
DDX56-201ENST00000258772 GOLGA5Q8TBA6 731 aa16.93■□□□□ 0.3
DDX56-201ENST00000258772 PHACTR2O75167 634 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 LCA5LO95447 670 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 KIF11P52732 1056 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 EHHADHQ08426 723 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 PSMD2Q13200 908 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 CERKQ8TCT0 537 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 SNX29Q8TEQ0 813 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 SMCR8Q8TEV9 937 aaPredicted RBP16.92■□□□□ 0.3
DDX56-201ENST00000258772 DDX12PQ92771 950 aa16.92■□□□□ 0.3
DDX56-201ENST00000258772 NGLY1Q96IV0 654 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms