RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 METTL13Q8N6R0 699 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 CNOT6LQ96LI5 555 aaKnown RBP12.63□□□□□ -0.39
NOD1-201ENST00000222823 C1orf112Q9NSG2 853 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 A0A087WWV3 80 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 H0YCG3 227 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 P4HA1P13674 534 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 CDC25AP30304 524 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 MCAMP43121 646 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 DIXDC1Q155Q3 683 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 PPP2R5EQ16537 467 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 EXOC3L4Q17RC7 722 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 SUSD4Q5VX71 490 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 TBCKQ8TEA7 893 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 PIH1D3Q9NQM4 214 aaKnown RBP12.63□□□□□ -0.39
NOD1-201ENST00000222823 FAM184BQ9ULE4 1060 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 CYP2D7A0A087X1C5 515 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 CLRN2A0PK11 232 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 EFCAB8A8MWE9 144 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 TRIM37O94972 964 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 USP17L8P0C7I0 530 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 DLATP10515 647 aaKnown RBP12.63□□□□□ -0.39
NOD1-201ENST00000222823 TTC31Q49AM3 519 aaPredicted RBP12.63□□□□□ -0.39
NOD1-201ENST00000222823 BRINP3Q76B58 766 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 AIFM3Q96NN9 605 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 TAF6LQ9Y6J9 622 aa12.63□□□□□ -0.39
NOD1-201ENST00000222823 KRIT1O00522 736 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 GCFC2P16383 781 aaKnown RBP12.62□□□□□ -0.39
NOD1-201ENST00000222823 HSPA1LP34931 641 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 LRCH2Q5VUJ6 765 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 MB21D2Q8IYB1 491 aaPredicted RBP12.62□□□□□ -0.39
NOD1-201ENST00000222823 SMYD4Q8IYR2 804 aaPredicted RBP12.62□□□□□ -0.39
NOD1-201ENST00000222823 DHTKD1Q96HY7 919 aaPredicted RBP12.62□□□□□ -0.39
NOD1-201ENST00000222823 CDHR2Q9BYE9 1310 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 EEF1GP26641 437 aaKnown RBP12.62□□□□□ -0.39
NOD1-201ENST00000222823 ITIH3Q06033 890 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 PTPROQ16827 1216 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 LGSNQ5TDP6 509 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 PROCA1Q8NCQ7 364 aaPredicted RBP12.62□□□□□ -0.39
NOD1-201ENST00000222823 SMC1BQ8NDV3 1235 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 STRBPQ96SI9 672 aaKnown RBP12.62□□□□□ -0.39
NOD1-201ENST00000222823 DBNDD1Q9H9R9 158 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 HGSO14964 777 aaPredicted RBP12.62□□□□□ -0.39
NOD1-201ENST00000222823 FKBP3Q00688 224 aaKnown RBP12.62□□□□□ -0.39
NOD1-201ENST00000222823 PPP2R5DQ14738 602 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 FYB2Q5VWT5 728 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 KCTD1Q719H9 257 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 CCDC110Q8TBZ0 833 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 PIGSQ96S52 555 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 COBLO75128 1261 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 NR2F2P24468 414 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 SLC16A2P36021 539 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 AOC3Q16853 763 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 HHATQ5VTY9 493 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 USP17L2Q6R6M4 530 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 VSIG1Q86XK7 387 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 PARP2Q9UGN5 583 aa12.62□□□□□ -0.39
NOD1-201ENST00000222823 PXDNQ92626 1479 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 M0QZ92 97 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 PRPF3O43395 683 aaKnown RBP12.61□□□□□ -0.39
NOD1-201ENST00000222823 GUCY2FP51841 1108 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 YARSP54577 528 aaKnown RBP12.61□□□□□ -0.39
NOD1-201ENST00000222823 GEN1Q17RS7 908 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 DENND2CQ68D51 928 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 GRAMD1CQ8IYS0 662 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 CCDC89Q8N998 374 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 RASSF4Q9H2L5 321 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 LRRIQ4A6NIV6 560 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 GTF2A1P52655 376 aaPredicted RBP12.61□□□□□ -0.39
NOD1-201ENST00000222823 CASC4Q6P4E1 433 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 CLEC4GQ6UXB4 293 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 SPATA24Q86W54 205 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 CCDC125Q86Z20 511 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 FMR1NBQ8N0W7 255 aaPredicted RBP12.61□□□□□ -0.39
NOD1-201ENST00000222823 PPFIBP2Q8ND30 876 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 GABPB2Q8TAK5 448 aaPredicted RBP12.61□□□□□ -0.39
NOD1-201ENST00000222823 DYNLL2Q96FJ2 89 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 GOLPH3LQ9H4A5 285 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 INPP5BP32019 993 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 DMP1Q13316 513 aaPredicted RBP12.61□□□□□ -0.39
NOD1-201ENST00000222823 P2RX5Q93086 422 aa12.61□□□□□ -0.39
NOD1-201ENST00000222823 HLFQ16534 295 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 EAPPQ56P03 285 aaPredicted RBP12.6□□□□□ -0.39
NOD1-201ENST00000222823 SULF1Q8IWU6 871 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 HACE1Q8IYU2 909 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 COA7Q96BR5 231 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 ADPGKQ9BRR6 497 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 BSDC1Q9NW68 430 aaPredicted RBP12.6□□□□□ -0.39
NOD1-201ENST00000222823 SRP68Q9UHB9 627 aaKnown RBP12.6□□□□□ -0.39
NOD1-201ENST00000222823 ODF2LQ9ULJ1 636 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 CTNNA1P35221 906 aaKnown RBP12.6□□□□□ -0.39
NOD1-201ENST00000222823 VPS41P49754 854 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 DPY19L2Q6NUT2 758 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 ENOX1Q8TC92 643 aaKnown RBP12.6□□□□□ -0.39
NOD1-201ENST00000222823 DHX36Q9H2U1 1008 aaKnown RBP12.6□□□□□ -0.39
NOD1-201ENST00000222823 ANAPC4Q9UJX5 808 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 NRXN3Q9Y4C0 1643 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 SORBS3O60504 671 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 BMP3P12645 472 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 MECOMQ03112 1051 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 POMGNT1Q8WZA1 660 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms