RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 TBC1D5Q92609 795 aa20.1■□□□□ 0.81
MRPL28-201ENST00000199706 PXMP2Q9NR77 195 aa20.1■□□□□ 0.81
MRPL28-201ENST00000199706 MOXD2PA6NHM9 499 aa20.09■□□□□ 0.81
MRPL28-201ENST00000199706 NKRFO15226 690 aaKnown RBP eCLIP20.09■□□□□ 0.81
MRPL28-201ENST00000199706 TOB2Q14106 344 aaPredicted RBP20.09■□□□□ 0.81
MRPL28-201ENST00000199706 DUSP28Q4G0W2 176 aa20.09■□□□□ 0.81
MRPL28-201ENST00000199706 CCSAPQ6IQ19 270 aaPredicted RBP20.09■□□□□ 0.81
MRPL28-201ENST00000199706 ZNF274Q96GC6 653 aaPredicted RBP20.09■□□□□ 0.81
MRPL28-201ENST00000199706 TAAR1Q96RJ0 339 aa20.09■□□□□ 0.81
MRPL28-201ENST00000199706 NR2E3Q9Y5X4 410 aa20.09■□□□□ 0.81
MRPL28-201ENST00000199706 ADCYAP1R1P41586 468 aa20.08■□□□□ 0.81
MRPL28-201ENST00000199706 C8orf34Q49A92 452 aa20.08■□□□□ 0.81
MRPL28-201ENST00000199706 GJC2Q5T442 439 aaPredicted RBP20.08■□□□□ 0.81
MRPL28-201ENST00000199706 ANO1Q5XXA6 986 aa20.08■□□□□ 0.81
MRPL28-201ENST00000199706 RAB11FIP4Q86YS3 637 aa20.08■□□□□ 0.81
MRPL28-201ENST00000199706 CMTR1Q8N1G2 835 aaKnown RBP20.08■□□□□ 0.81
MRPL28-201ENST00000199706 PCSK9Q8NBP7 692 aaKnown RBP20.08■□□□□ 0.81
MRPL28-201ENST00000199706 EIF3JO75822 258 aaKnown RBP20.07■□□□□ 0.8
MRPL28-201ENST00000199706 STAM2O75886 525 aa20.07■□□□□ 0.8
MRPL28-201ENST00000199706 PGK1P00558 417 aa20.07■□□□□ 0.8
MRPL28-201ENST00000199706 SMPD1P17405 629 aa20.07■□□□□ 0.8
MRPL28-201ENST00000199706 PDIA3P30101 505 aaKnown RBP20.07■□□□□ 0.8
MRPL28-201ENST00000199706 CDC27P30260 824 aa20.07■□□□□ 0.8
MRPL28-201ENST00000199706 STXBP2Q15833 593 aa20.07■□□□□ 0.8
MRPL28-201ENST00000199706 ARHGEF16Q5VV41 709 aa20.07■□□□□ 0.8
MRPL28-201ENST00000199706 TLK2Q86UE8 772 aa20.07■□□□□ 0.8
MRPL28-201ENST00000199706 CUL5Q93034 780 aa20.07■□□□□ 0.8
MRPL28-201ENST00000199706 LENG1Q96BZ8 264 aaPredicted RBP20.07■□□□□ 0.8
MRPL28-201ENST00000199706 PDCD2LQ9BRP1 358 aa20.07■□□□□ 0.8
MRPL28-201ENST00000199706 UPF3BQ9BZI7 483 aaKnown RBP20.07■□□□□ 0.8
MRPL28-201ENST00000199706 GLT8D2Q9H1C3 349 aa20.07■□□□□ 0.8
MRPL28-201ENST00000199706 CTAGE5O15320 804 aa20.06■□□□□ 0.8
MRPL28-201ENST00000199706 EVI5O60447 810 aa20.06■□□□□ 0.8
MRPL28-201ENST00000199706 NR3C2P08235 984 aa20.06■□□□□ 0.8
MRPL28-201ENST00000199706 XRRA1Q6P2D8 792 aa20.06■□□□□ 0.8
MRPL28-201ENST00000199706 PDGFCQ9NRA1 345 aa20.06■□□□□ 0.8
MRPL28-201ENST00000199706 PDRG1Q9NUG6 133 aa20.06■□□□□ 0.8
MRPL28-201ENST00000199706 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.05■□□□□ 0.8
MRPL28-201ENST00000199706 MEIS2O14770 477 aa20.05■□□□□ 0.8
MRPL28-201ENST00000199706 IFNAR1P17181 557 aa20.05■□□□□ 0.8
MRPL28-201ENST00000199706 HOXA13P31271 388 aaPredicted RBP20.05■□□□□ 0.8
MRPL28-201ENST00000199706 ADD1P35611 737 aaKnown RBP20.05■□□□□ 0.8
MRPL28-201ENST00000199706 TTLL4Q14679 1199 aa20.05■□□□□ 0.8
MRPL28-201ENST00000199706 ANKRD1Q15327 319 aa20.05■□□□□ 0.8
MRPL28-201ENST00000199706 NTRK3Q16288 839 aa20.05■□□□□ 0.8
MRPL28-201ENST00000199706 EEPD1Q7L9B9 569 aa20.05■□□□□ 0.8
MRPL28-201ENST00000199706 VSIG10LQ86VR7 867 aa20.05■□□□□ 0.8
MRPL28-201ENST00000199706 PIBF1Q8WXW3 757 aa20.05■□□□□ 0.8
MRPL28-201ENST00000199706 DPF3Q92784 378 aa20.05■□□□□ 0.8
MRPL28-201ENST00000199706 RNF26Q9BY78 433 aaPredicted RBP20.05■□□□□ 0.8
MRPL28-201ENST00000199706 WDR11Q9BZH6 1224 aa20.05■□□□□ 0.8
MRPL28-201ENST00000199706 SENP6Q9GZR1 1112 aaPredicted RBP20.05■□□□□ 0.8
MRPL28-201ENST00000199706 PSTPIP2Q9H939 334 aa20.05■□□□□ 0.8
MRPL28-201ENST00000199706 BARHL2Q9NY43 387 aa20.05■□□□□ 0.8
MRPL28-201ENST00000199706 DDX49Q9Y6V7 483 aaKnown RBP20.05■□□□□ 0.8
MRPL28-201ENST00000199706 ELP1O95163 1332 aa20.04■□□□□ 0.8
MRPL28-201ENST00000199706 A0A1W2PQ45 241 aaPredicted RBP20.04■□□□□ 0.8
MRPL28-201ENST00000199706 A0A1W2PQY0 241 aa20.04■□□□□ 0.8
MRPL28-201ENST00000199706 PRPF3O43395 683 aaKnown RBP20.04■□□□□ 0.8
MRPL28-201ENST00000199706 C6orf222P0C671 652 aaPredicted RBP20.04■□□□□ 0.8
MRPL28-201ENST00000199706 EIF2AK2P19525 551 aaKnown RBP20.04■□□□□ 0.8
MRPL28-201ENST00000199706 ACLYP53396 1101 aa20.04■□□□□ 0.8
MRPL28-201ENST00000199706 PGM5Q15124 567 aa20.04■□□□□ 0.8
MRPL28-201ENST00000199706 FSCN1Q16658 493 aaKnown RBP20.04■□□□□ 0.8
MRPL28-201ENST00000199706 PFKFB3Q16875 520 aaPredicted RBP20.04■□□□□ 0.8
MRPL28-201ENST00000199706 WWC2Q6AWC2 1192 aa20.04■□□□□ 0.8
MRPL28-201ENST00000199706 CCDC62Q6P9F0 684 aa20.04■□□□□ 0.8
MRPL28-201ENST00000199706 KCNV1Q6PIU1 500 aa20.04■□□□□ 0.8
MRPL28-201ENST00000199706 HEATR3Q7Z4Q2 680 aa20.04■□□□□ 0.8
MRPL28-201ENST00000199706 FAM177A1Q8N128 213 aaPredicted RBP20.04■□□□□ 0.8
MRPL28-201ENST00000199706 CCDC82Q8N4S0 544 aa20.04■□□□□ 0.8
MRPL28-201ENST00000199706 SEZ6LQ9BYH1 1024 aa20.04■□□□□ 0.8
MRPL28-201ENST00000199706 AP5M1Q9H0R1 490 aa20.04■□□□□ 0.8
MRPL28-201ENST00000199706 NAP1L2Q9ULW6 460 aaPredicted RBP20.04■□□□□ 0.8
MRPL28-201ENST00000199706 V9GY48 417 aaPredicted RBP20.04■□□□□ 0.8
MRPL28-201ENST00000199706 ESYT2A0FGR8 921 aa20.03■□□□□ 0.8
MRPL28-201ENST00000199706 CABYRO75952 493 aa20.03■□□□□ 0.8
MRPL28-201ENST00000199706 SEC24BO95487 1268 aa20.03■□□□□ 0.8
MRPL28-201ENST00000199706 CCND2P30279 289 aa20.03■□□□□ 0.8
MRPL28-201ENST00000199706 LRRC26Q2I0M4 334 aa20.03■□□□□ 0.8
MRPL28-201ENST00000199706 IL27Q8NEV9 243 aa20.03■□□□□ 0.8
MRPL28-201ENST00000199706 SMARCC2Q8TAQ2 1214 aa20.03■□□□□ 0.8
MRPL28-201ENST00000199706 EMID1Q96A84 441 aaPredicted RBP20.03■□□□□ 0.8
MRPL28-201ENST00000199706 MYADML2A6NDP7 307 aa20.02■□□□□ 0.8
MRPL28-201ENST00000199706 STXBP3O00186 592 aa20.02■□□□□ 0.8
MRPL28-201ENST00000199706 ZEB2O60315 1214 aa20.02■□□□□ 0.8
MRPL28-201ENST00000199706 TGFB3P10600 412 aa20.02■□□□□ 0.8
MRPL28-201ENST00000199706 SCG2P13521 617 aa20.02■□□□□ 0.8
MRPL28-201ENST00000199706 CPT1AP50416 773 aa20.02■□□□□ 0.8
MRPL28-201ENST00000199706 KCNA10Q16322 511 aa20.02■□□□□ 0.8
MRPL28-201ENST00000199706 GNASQ5JWF2 1037 aa20.02■□□□□ 0.8
MRPL28-201ENST00000199706 SLC39A5Q6ZMH5 540 aa20.02■□□□□ 0.8
MRPL28-201ENST00000199706 NOL8Q76FK4 1167 aaKnown RBP20.02■□□□□ 0.8
MRPL28-201ENST00000199706 CCDC12Q8WUD4 166 aaPredicted RBP20.02■□□□□ 0.8
MRPL28-201ENST00000199706 RIC8AQ9NPQ8 531 aa20.02■□□□□ 0.8
MRPL28-201ENST00000199706 hCG_1642624A0A1W2PR95 340 aa20.01■□□□□ 0.79
MRPL28-201ENST00000199706 TXNP10599 105 aaKnown RBP20.01■□□□□ 0.79
MRPL28-201ENST00000199706 NAPAP54920 295 aa20.01■□□□□ 0.79
MRPL28-201ENST00000199706 BRDTQ58F21 947 aaPredicted RBP20.01■□□□□ 0.79
MRPL28-201ENST00000199706 PCNX4Q63HM2 1172 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms