RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 NEXNQ0ZGT2 675 aa12.35□□□□□ -0.43
VLDLR-203ENST00000382100 DRC7Q8IY82 874 aa12.35□□□□□ -0.43
VLDLR-203ENST00000382100 INCENPQ9NQS7 918 aa12.35□□□□□ -0.43
VLDLR-203ENST00000382100 EIF3AQ14152 1382 aaKnown RBP12.35□□□□□ -0.43
VLDLR-203ENST00000382100 HMGN5P82970 282 aaKnown RBP12.35□□□□□ -0.43
VLDLR-203ENST00000382100 CLIP1P30622 1438 aa12.34□□□□□ -0.43
VLDLR-203ENST00000382100 NPM1P06748 294 aaKnown RBP eCLIP12.34□□□□□ -0.43
VLDLR-203ENST00000382100 SCAF1Q9H7N4 1312 aaKnown RBP12.34□□□□□ -0.43
VLDLR-203ENST00000382100 KCNJ4P48050 445 aa12.33□□□□□ -0.43
VLDLR-203ENST00000382100 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.33□□□□□ -0.43
VLDLR-203ENST00000382100 PDE3BQ13370 1112 aa12.33□□□□□ -0.44
VLDLR-203ENST00000382100 CCP110O43303 1012 aa12.33□□□□□ -0.44
VLDLR-203ENST00000382100 ZRSR2Q15696 482 aaKnown RBP12.33□□□□□ -0.44
VLDLR-203ENST00000382100 TXLNBQ8N3L3 684 aa12.33□□□□□ -0.44
VLDLR-203ENST00000382100 HOOK1Q9UJC3 728 aaKnown RBP12.33□□□□□ -0.44
VLDLR-203ENST00000382100 ANKRD20A12PQ8NF67 263 aa12.32□□□□□ -0.44
VLDLR-203ENST00000382100 GOLGA6L7A0A1B0GV03 622 aa12.32□□□□□ -0.44
VLDLR-203ENST00000382100 NAP1L2Q9ULW6 460 aaPredicted RBP12.31□□□□□ -0.44
VLDLR-203ENST00000382100 ERCC4Q92889 916 aaPredicted RBP12.31□□□□□ -0.44
VLDLR-203ENST00000382100 GNL2Q13823 731 aaKnown RBP12.31□□□□□ -0.44
VLDLR-203ENST00000382100 CEP164Q9UPV0 1460 aa12.31□□□□□ -0.44
VLDLR-203ENST00000382100 HDGFP51858 240 aaKnown RBP12.31□□□□□ -0.44
VLDLR-203ENST00000382100 PES1O00541 588 aaKnown RBP12.3□□□□□ -0.44
VLDLR-203ENST00000382100 BAZ1AQ9NRL2 1556 aaPredicted RBP12.3□□□□□ -0.44
VLDLR-203ENST00000382100 TPM2P07951 284 aa12.29□□□□□ -0.44
VLDLR-203ENST00000382100 STK11IPQ8N1F8 1099 aa12.29□□□□□ -0.44
VLDLR-203ENST00000382100 HSP90B2PQ58FF3 399 aa12.29□□□□□ -0.44
VLDLR-203ENST00000382100 FAM9BQ8IZU0 186 aa12.29□□□□□ -0.44
VLDLR-203ENST00000382100 AK7Q96M32 723 aa12.28□□□□□ -0.44
VLDLR-203ENST00000382100 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
VLDLR-203ENST00000382100 ST18O60284 1047 aa12.27□□□□□ -0.44
VLDLR-203ENST00000382100 AEBP2Q6ZN18 517 aaPredicted RBP12.27□□□□□ -0.44
VLDLR-203ENST00000382100 RWDD1Q9H446 243 aaPredicted RBP12.26□□□□□ -0.45
VLDLR-203ENST00000382100 A0A0G2JS52 829 aa12.26□□□□□ -0.45
VLDLR-203ENST00000382100 LOC105371045A0A1W2PR82 267 aa12.26□□□□□ -0.45
VLDLR-203ENST00000382100 FEZ1Q99689 392 aa12.26□□□□□ -0.45
VLDLR-203ENST00000382100 PPARGC1BQ86YN6 1023 aaKnown RBP12.25□□□□□ -0.45
VLDLR-203ENST00000382100 DIAPH3Q9NSV4 1193 aa12.25□□□□□ -0.45
VLDLR-203ENST00000382100 KANK1Q14678 1352 aa12.24□□□□□ -0.45
VLDLR-203ENST00000382100 PMFBP1Q8TBY8 1022 aa12.24□□□□□ -0.45
VLDLR-203ENST00000382100 KIF7Q2M1P5 1343 aa12.24□□□□□ -0.45
VLDLR-203ENST00000382100 NEFHP12036 1026 aa12.23□□□□□ -0.45
VLDLR-203ENST00000382100 RALBP1Q15311 655 aa12.23□□□□□ -0.45
VLDLR-203ENST00000382100 LMOD3Q0VAK6 560 aa12.22□□□□□ -0.45
VLDLR-203ENST00000382100 FAM107BQ9H098 131 aa12.22□□□□□ -0.45
VLDLR-203ENST00000382100 CCDC173Q0VFZ6 552 aa12.22□□□□□ -0.45
VLDLR-203ENST00000382100 POLR3GO15318 223 aaPredicted RBP12.21□□□□□ -0.45
VLDLR-203ENST00000382100 PLPPR3Q6T4P5 718 aa12.21□□□□□ -0.45
VLDLR-203ENST00000382100 PDCL2Q8N4E4 241 aa12.2□□□□□ -0.46
VLDLR-203ENST00000382100 DDX10Q13206 875 aaKnown RBP12.2□□□□□ -0.46
VLDLR-203ENST00000382100 ROCK1Q13464 1354 aa12.2□□□□□ -0.46
VLDLR-203ENST00000382100 SCAPERQ9BY12 1400 aa12.19□□□□□ -0.46
VLDLR-203ENST00000382100 PIP4K2AP48426 406 aaPredicted RBP12.19□□□□□ -0.46
VLDLR-203ENST00000382100 KTN1Q86UP2 1357 aaKnown RBP12.18□□□□□ -0.46
VLDLR-203ENST00000382100 LUC7LQ9NQ29 371 aaKnown RBP12.18□□□□□ -0.46
VLDLR-203ENST00000382100 NAT10Q9H0A0 1025 aaKnown RBP12.18□□□□□ -0.46
VLDLR-203ENST00000382100 OS9Q13438 667 aaPredicted RBP12.17□□□□□ -0.46
VLDLR-203ENST00000382100 CPLX2Q6PUV4 134 aaKnown RBP12.17□□□□□ -0.46
VLDLR-203ENST00000382100 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.17□□□□□ -0.46
VLDLR-203ENST00000382100 RUFY1Q96T51 708 aa12.17□□□□□ -0.46
VLDLR-203ENST00000382100 MNS1Q8NEH6 495 aa12.17□□□□□ -0.46
VLDLR-203ENST00000382100 GOLGA6L19H0YKK7 550 aa12.17□□□□□ -0.46
VLDLR-203ENST00000382100 HMGB2P26583 209 aaKnown RBP12.16□□□□□ -0.46
VLDLR-203ENST00000382100 IQCEQ6IPM2 695 aa12.16□□□□□ -0.46
VLDLR-203ENST00000382100 CCDC47Q96A33 483 aaKnown RBP12.16□□□□□ -0.46
VLDLR-203ENST00000382100 U2SURPO15042 1029 aaKnown RBP12.16□□□□□ -0.46
VLDLR-203ENST00000382100 ANKRD18AQ8IVF6 992 aa12.16□□□□□ -0.46
VLDLR-203ENST00000382100 KIF27Q86VH2 1401 aa12.16□□□□□ -0.46
VLDLR-203ENST00000382100 REC8O95072 547 aa12.16□□□□□ -0.46
VLDLR-203ENST00000382100 DEKP35659 375 aaKnown RBP12.16□□□□□ -0.46
VLDLR-203ENST00000382100 DEF6Q9H4E7 631 aa12.15□□□□□ -0.46
VLDLR-203ENST00000382100 RABEP1Q15276 862 aa12.15□□□□□ -0.46
VLDLR-203ENST00000382100 PLCB2Q00722 1185 aa12.15□□□□□ -0.46
VLDLR-203ENST00000382100 IPO9Q96P70 1041 aaKnown RBP12.15□□□□□ -0.46
VLDLR-203ENST00000382100 ZCCHC6Q5VYS8 1495 aaKnown RBP12.15□□□□□ -0.46
VLDLR-203ENST00000382100 KIF2AO00139 706 aaPredicted RBP12.15□□□□□ -0.47
VLDLR-203ENST00000382100 APPP05067 770 aa12.15□□□□□ -0.47
VLDLR-203ENST00000382100 ARXQ96QS3 562 aa12.15□□□□□ -0.47
VLDLR-203ENST00000382100 LETM1O95202 739 aaPredicted RBP12.13□□□□□ -0.47
VLDLR-203ENST00000382100 MAP1BP46821 2468 aaKnown RBP12.13□□□□□ -0.47
VLDLR-203ENST00000382100 E9PSI1 815 aa12.13□□□□□ -0.47
VLDLR-203ENST00000382100 RB1CC1Q8TDY2 1594 aa12.13□□□□□ -0.47
VLDLR-203ENST00000382100 NF2P35240 595 aa12.13□□□□□ -0.47
VLDLR-203ENST00000382100 NCBP3Q53F19 620 aaKnown RBP12.12□□□□□ -0.47
VLDLR-203ENST00000382100 SPAG9O60271 1321 aaKnown RBP12.12□□□□□ -0.47
VLDLR-203ENST00000382100 RNF20Q5VTR2 975 aa12.12□□□□□ -0.47
VLDLR-203ENST00000382100 NACADO15069 1562 aa12.12□□□□□ -0.47
VLDLR-203ENST00000382100 EZRP15311 586 aaKnown RBP12.12□□□□□ -0.47
VLDLR-203ENST00000382100 CGNL1Q0VF96 1302 aa12.12□□□□□ -0.47
VLDLR-203ENST00000382100 STAC3Q96MF2 364 aa12.11□□□□□ -0.47
VLDLR-203ENST00000382100 PPP1R15AO75807 674 aaPredicted RBP12.11□□□□□ -0.47
VLDLR-203ENST00000382100 CCNB3Q8WWL7 1395 aa12.11□□□□□ -0.47
VLDLR-203ENST00000382100 UACAQ9BZF9 1416 aa12.11□□□□□ -0.47
VLDLR-203ENST00000382100 TNIKQ9UKE5 1360 aa12.11□□□□□ -0.47
VLDLR-203ENST00000382100 TMF1P82094 1093 aa12.11□□□□□ -0.47
VLDLR-203ENST00000382100 TMX4Q9H1E5 349 aaPredicted RBP12.1□□□□□ -0.47
VLDLR-203ENST00000382100 GBP2P32456 591 aaPredicted RBP12.1□□□□□ -0.47
VLDLR-203ENST00000382100 ANKRD30AQ9BXX3 1397 aa12.1□□□□□ -0.47
VLDLR-203ENST00000382100 PRKCSHP14314 528 aaPredicted RBP12.1□□□□□ -0.47
VLDLR-203ENST00000382100 PDCP20941 246 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms